RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 TMF1P82094 1093 aa26.39■■□□□ 1.81
COLCA2-201ENST00000398035 CDCA8Q53HL2 280 aa26.38■■□□□ 1.81
COLCA2-201ENST00000398035 ABTB2Q8N961 1025 aa26.38■■□□□ 1.81
COLCA2-201ENST00000398035 CABLES1Q8TDN4 633 aa26.38■■□□□ 1.81
COLCA2-201ENST00000398035 ITSN1Q15811 1721 aa26.37■■□□□ 1.81
COLCA2-201ENST00000398035 USP21Q9UK80 565 aa26.37■■□□□ 1.81
COLCA2-201ENST00000398035 QTRT2Q9H974 415 aaKnown RBP26.36■■□□□ 1.81
COLCA2-201ENST00000398035 NLRP13Q86W25 1043 aa26.35■■□□□ 1.81
COLCA2-201ENST00000398035 RXRBP28702 533 aa26.34■■□□□ 1.81
COLCA2-201ENST00000398035 TMC1Q8TDI8 760 aa26.34■■□□□ 1.81
COLCA2-201ENST00000398035 PLEKHG5O94827 1062 aa26.33■■□□□ 1.81
COLCA2-201ENST00000398035 TERF2IPQ9NYB0 399 aa26.32■■□□□ 1.8
COLCA2-201ENST00000398035 TRPC5Q9UL62 973 aaPredicted RBP26.32■■□□□ 1.8
COLCA2-201ENST00000398035 USP6P35125 1406 aa26.31■■□□□ 1.8
COLCA2-201ENST00000398035 HDGFL2Q7Z4V5 671 aaPredicted RBP26.31■■□□□ 1.8
COLCA2-201ENST00000398035 TOPAZ1Q8N9V7 1692 aa26.31■■□□□ 1.8
COLCA2-201ENST00000398035 SOCS7O14512 581 aa26.31■■□□□ 1.8
COLCA2-201ENST00000398035 EIF4G2P78344 907 aaKnown RBP eCLIP26.31■■□□□ 1.8
COLCA2-201ENST00000398035 NINLQ9Y2I6 1382 aa26.3■■□□□ 1.8
COLCA2-201ENST00000398035 RBM6P78332 1123 aaKnown RBP26.3■■□□□ 1.8
COLCA2-201ENST00000398035 SLC12A5Q9H2X9 1139 aa26.3■■□□□ 1.8
COLCA2-201ENST00000398035 CPSF1Q10570 1443 aaKnown RBP26.28■■□□□ 1.8
COLCA2-201ENST00000398035 NUTM2GQ5VZR2 741 aa26.28■■□□□ 1.8
COLCA2-201ENST00000398035 UNC5CLQ8IV45 518 aa26.28■■□□□ 1.8
COLCA2-201ENST00000398035 TTC21AQ8NDW8 1320 aa26.28■■□□□ 1.8
COLCA2-201ENST00000398035 FAM83GA6ND36 823 aa26.27■■□□□ 1.8
COLCA2-201ENST00000398035 NLRP6P59044 892 aa26.27■■□□□ 1.8
COLCA2-201ENST00000398035 TRPM3Q9HCF6 1732 aaPredicted RBP26.27■■□□□ 1.8
COLCA2-201ENST00000398035 KTN1Q86UP2 1357 aaKnown RBP26.27■■□□□ 1.8
COLCA2-201ENST00000398035 TTC21BQ7Z4L5 1316 aa26.26■■□□□ 1.79
COLCA2-201ENST00000398035 SSH2Q76I76 1423 aa26.25■■□□□ 1.79
COLCA2-201ENST00000398035 PRDM11Q9NQV5 511 aa26.23■■□□□ 1.79
COLCA2-201ENST00000398035 BCL9LQ86UU0 1499 aa26.23■■□□□ 1.79
COLCA2-201ENST00000398035 USP19O94966 1318 aa26.23■■□□□ 1.79
COLCA2-201ENST00000398035 GCP02774 474 aa26.22■■□□□ 1.79
COLCA2-201ENST00000398035 ALS2Q96Q42 1657 aa26.22■■□□□ 1.79
COLCA2-201ENST00000398035 SLIT2O94813 1529 aa26.21■■□□□ 1.79
COLCA2-201ENST00000398035 KCNH5Q8NCM2 988 aa26.19■■□□□ 1.78
COLCA2-201ENST00000398035 GJD4Q96KN9 370 aaPredicted RBP26.19■■□□□ 1.78
COLCA2-201ENST00000398035 HSPA5P11021 654 aaKnown RBP26.18■■□□□ 1.78
COLCA2-201ENST00000398035 ZC3H6P61129 1189 aaKnown RBP26.18■■□□□ 1.78
COLCA2-201ENST00000398035 VPS72Q15906 364 aa26.18■■□□□ 1.78
COLCA2-201ENST00000398035 BTG4Q9NY30 223 aa26.18■■□□□ 1.78
COLCA2-201ENST00000398035 ATRNO75882 1429 aa26.18■■□□□ 1.78
COLCA2-201ENST00000398035 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.17■■□□□ 1.78
COLCA2-201ENST00000398035 CDK12Q9NYV4 1490 aaPredicted RBP26.16■■□□□ 1.78
COLCA2-201ENST00000398035 KIAA0232Q92628 1395 aa26.16■■□□□ 1.78
COLCA2-201ENST00000398035 CPDO75976 1380 aa26.15■■□□□ 1.78
COLCA2-201ENST00000398035 EDC4Q6P2E9 1401 aaKnown RBP26.15■■□□□ 1.78
COLCA2-201ENST00000398035 A0A1W2PP64 1363 aa26.14■■□□□ 1.78
COLCA2-201ENST00000398035 CD163L1Q9NR16 1453 aa26.14■■□□□ 1.78
COLCA2-201ENST00000398035 ANKRD36BQ8N2N9 1353 aa26.13■■□□□ 1.77
COLCA2-201ENST00000398035 CCDC9Q9Y3X0 531 aaKnown RBP26.12■■□□□ 1.77
COLCA2-201ENST00000398035 USP31Q70CQ4 1352 aa26.11■■□□□ 1.77
COLCA2-201ENST00000398035 EVA1CP58658 441 aa26.1■■□□□ 1.77
COLCA2-201ENST00000398035 CHRNA2Q15822 529 aa26.1■■□□□ 1.77
COLCA2-201ENST00000398035 NME9Q86XW9 330 aa26.08■■□□□ 1.77
COLCA2-201ENST00000398035 MARF1Q9Y4F3 1742 aaKnown RBP26.08■■□□□ 1.76
COLCA2-201ENST00000398035 ONECUT3O60422 494 aaPredicted RBP26.05■■□□□ 1.76
COLCA2-201ENST00000398035 ARHGEF25Q86VW2 580 aa26.05■■□□□ 1.76
COLCA2-201ENST00000398035 COG3Q96JB2 828 aa26.05■■□□□ 1.76
COLCA2-201ENST00000398035 AATKQ6ZMQ8 1374 aa26.04■■□□□ 1.76
COLCA2-201ENST00000398035 COL14A1Q05707 1796 aaKnown RBP26.04■■□□□ 1.76
COLCA2-201ENST00000398035 ABCA3Q99758 1704 aa26.04■■□□□ 1.76
COLCA2-201ENST00000398035 POLR3GLQ9BT43 218 aa26.03■■□□□ 1.76
COLCA2-201ENST00000398035 STRN4Q9NRL3 753 aa26.03■■□□□ 1.76
COLCA2-201ENST00000398035 SLIT3O75094 1523 aa26.03■■□□□ 1.76
COLCA2-201ENST00000398035 ZBTB7CA1YPR0 619 aa26.02■■□□□ 1.76
COLCA2-201ENST00000398035 ZRANB1Q9UGI0 708 aa26.02■■□□□ 1.76
COLCA2-201ENST00000398035 SPATA31A5Q5VU36 1347 aa26.02■■□□□ 1.76
COLCA2-201ENST00000398035 SPATA31A7Q8IWB4 1347 aa26.02■■□□□ 1.76
COLCA2-201ENST00000398035 AKAP12Q02952 1782 aa26.02■■□□□ 1.76
COLCA2-201ENST00000398035 NWD2Q9ULI1 1742 aa26■■□□□ 1.75
COLCA2-201ENST00000398035 CRYBG1Q9Y4K1 1723 aa26■■□□□ 1.75
COLCA2-201ENST00000398035 RGS12O14924 1447 aa26■■□□□ 1.75
COLCA2-201ENST00000398035 SOX12O15370 315 aa26■■□□□ 1.75
COLCA2-201ENST00000398035 FYB1O15117 783 aa25.99■■□□□ 1.75
COLCA2-201ENST00000398035 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.99■■□□□ 1.75
COLCA2-201ENST00000398035 NRKQ7Z2Y5 1582 aa25.99■■□□□ 1.75
COLCA2-201ENST00000398035 SEPT12Q8IYM1 358 aa25.98■■□□□ 1.75
COLCA2-201ENST00000398035 PIK3C2AO00443 1686 aa25.98■■□□□ 1.75
COLCA2-201ENST00000398035 PHRF1Q9P1Y6 1649 aaKnown RBP25.98■■□□□ 1.75
COLCA2-201ENST00000398035 MON2Q7Z3U7 1717 aa25.98■■□□□ 1.75
COLCA2-201ENST00000398035 SPATA31A1Q5TZJ5 1347 aa25.97■■□□□ 1.75
COLCA2-201ENST00000398035 CARD14Q9BXL6 1004 aa25.97■■□□□ 1.75
COLCA2-201ENST00000398035 THRAP3Q9Y2W1 955 aaKnown RBP25.96■■□□□ 1.75
COLCA2-201ENST00000398035 FAM98CQ17RN3 349 aaKnown RBP25.95■■□□□ 1.74
COLCA2-201ENST00000398035 PLCH1Q4KWH8 1693 aa25.94■■□□□ 1.74
COLCA2-201ENST00000398035 LARP1Q6PKG0 1096 aaKnown RBP25.94■■□□□ 1.74
COLCA2-201ENST00000398035 AXIN2Q9Y2T1 843 aa25.94■■□□□ 1.74
COLCA2-201ENST00000398035 OVOS2A0A0J9YW53 1432 aa25.93■■□□□ 1.74
COLCA2-201ENST00000398035 OVOS2Q6IE36 1432 aa25.93■■□□□ 1.74
COLCA2-201ENST00000398035 A0A0G2JS52 829 aa25.93■■□□□ 1.74
COLCA2-201ENST00000398035 MYT1Q01538 1121 aa25.93■■□□□ 1.74
COLCA2-201ENST00000398035 BARGINQ6ZT62 677 aa25.93■■□□□ 1.74
COLCA2-201ENST00000398035 TCP11L2Q8N4U5 519 aa25.93■■□□□ 1.74
COLCA2-201ENST00000398035 CAMTA1Q9Y6Y1 1673 aa25.93■■□□□ 1.74
COLCA2-201ENST00000398035 CGNL1Q0VF96 1302 aa25.92■■□□□ 1.74
COLCA2-201ENST00000398035 C11orf95C9JLR9 678 aaPredicted RBP25.92■■□□□ 1.74
COLCA2-201ENST00000398035 GGNBP2Q9H3C7 697 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms