RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 RBM6P78332 1123 aaKnown RBP27.34■■□□□ 1.97
CDKN1B-202ENST00000396340 ATAD2Q6PL18 1390 aa27.34■■□□□ 1.97
CDKN1B-202ENST00000396340 PPIP5K1Q6PFW1 1433 aa27.33■■□□□ 1.97
CDKN1B-202ENST00000396340 PAK3O75914 559 aaPredicted RBP27.33■■□□□ 1.97
CDKN1B-202ENST00000396340 ACEP12821 1306 aa27.33■■□□□ 1.97
CDKN1B-202ENST00000396340 ABCA3Q99758 1704 aa27.31■■□□□ 1.96
CDKN1B-202ENST00000396340 NWD2Q9ULI1 1742 aa27.31■■□□□ 1.96
CDKN1B-202ENST00000396340 PUS7Q96PZ0 661 aaKnown RBP27.3■■□□□ 1.96
CDKN1B-202ENST00000396340 ZNF692Q9BU19 519 aaPredicted RBP27.3■■□□□ 1.96
CDKN1B-202ENST00000396340 CABP2Q9NPB3 220 aa27.29■■□□□ 1.96
CDKN1B-202ENST00000396340 UNC5CLQ8IV45 518 aa27.24■■□□□ 1.95
CDKN1B-202ENST00000396340 CCER1Q8TC90 406 aaPredicted RBP27.24■■□□□ 1.95
CDKN1B-202ENST00000396340 SLIT2O94813 1529 aa27.24■■□□□ 1.95
CDKN1B-202ENST00000396340 CABP1Q9NZU7 370 aa27.23■■□□□ 1.95
CDKN1B-202ENST00000396340 COL14A1Q05707 1796 aaKnown RBP27.22■■□□□ 1.95
CDKN1B-202ENST00000396340 BCL9LQ86UU0 1499 aa27.22■■□□□ 1.95
CDKN1B-202ENST00000396340 NLRP13Q86W25 1043 aa27.22■■□□□ 1.95
CDKN1B-202ENST00000396340 ABTB2Q8N961 1025 aa27.22■■□□□ 1.95
CDKN1B-202ENST00000396340 ATRNO75882 1429 aa27.22■■□□□ 1.95
CDKN1B-202ENST00000396340 CRYBG1Q9Y4K1 1723 aa27.21■■□□□ 1.95
CDKN1B-202ENST00000396340 PLCH1Q4KWH8 1693 aa27.21■■□□□ 1.95
CDKN1B-202ENST00000396340 CABLES1Q8TDN4 633 aa27.2■■□□□ 1.94
CDKN1B-202ENST00000396340 USP6P35125 1406 aa27.19■■□□□ 1.94
CDKN1B-202ENST00000396340 AKAP12Q02952 1782 aa27.19■■□□□ 1.94
CDKN1B-202ENST00000396340 NINLQ9Y2I6 1382 aa27.19■■□□□ 1.94
CDKN1B-202ENST00000396340 GJD4Q96KN9 370 aaPredicted RBP27.17■■□□□ 1.94
CDKN1B-202ENST00000396340 PHRF1Q9P1Y6 1649 aaKnown RBP27.16■■□□□ 1.94
CDKN1B-202ENST00000396340 CDCA8Q53HL2 280 aa27.16■■□□□ 1.94
CDKN1B-202ENST00000396340 TTC21AQ8NDW8 1320 aa27.16■■□□□ 1.94
CDKN1B-202ENST00000396340 PRDM11Q9NQV5 511 aa27.14■■□□□ 1.94
CDKN1B-202ENST00000396340 VPS72Q15906 364 aa27.13■■□□□ 1.93
CDKN1B-202ENST00000396340 TERF2IPQ9NYB0 399 aa27.13■■□□□ 1.93
CDKN1B-202ENST00000396340 ST20-MTHFSA0A0A6YYL1 179 aa27.12■■□□□ 1.93
CDKN1B-202ENST00000396340 FAM83GA6ND36 823 aa27.12■■□□□ 1.93
CDKN1B-202ENST00000396340 HDGFL2Q7Z4V5 671 aaPredicted RBP27.12■■□□□ 1.93
CDKN1B-202ENST00000396340 CPSF1Q10570 1443 aaKnown RBP27.11■■□□□ 1.93
CDKN1B-202ENST00000396340 KTN1Q86UP2 1357 aaKnown RBP27.1■■□□□ 1.93
CDKN1B-202ENST00000396340 USP47Q96K76 1375 aa27.1■■□□□ 1.93
CDKN1B-202ENST00000396340 TMF1P82094 1093 aa27.1■■□□□ 1.93
CDKN1B-202ENST00000396340 USP19O94966 1318 aa27.1■■□□□ 1.93
CDKN1B-202ENST00000396340 MON2Q7Z3U7 1717 aa27.1■■□□□ 1.93
CDKN1B-202ENST00000396340 CPDO75976 1380 aa27.09■■□□□ 1.93
CDKN1B-202ENST00000396340 PLEKHG5O94827 1062 aa27.09■■□□□ 1.93
CDKN1B-202ENST00000396340 RGS12O14924 1447 aa27.08■■□□□ 1.93
CDKN1B-202ENST00000396340 NLRP6P59044 892 aa27.08■■□□□ 1.93
CDKN1B-202ENST00000396340 KCNH5Q8NCM2 988 aa27.08■■□□□ 1.93
CDKN1B-202ENST00000396340 BTG4Q9NY30 223 aa27.08■■□□□ 1.93
CDKN1B-202ENST00000396340 SSH2Q76I76 1423 aa27.07■■□□□ 1.92
CDKN1B-202ENST00000396340 TESK2Q96S53 571 aa27.07■■□□□ 1.92
CDKN1B-202ENST00000396340 TMC1Q8TDI8 760 aa27.06■■□□□ 1.92
CDKN1B-202ENST00000396340 NRAPQ86VF7 1730 aa27.06■■□□□ 1.92
CDKN1B-202ENST00000396340 GCP02774 474 aa27.05■■□□□ 1.92
CDKN1B-202ENST00000396340 CCDC9Q9Y3X0 531 aaKnown RBP27.05■■□□□ 1.92
CDKN1B-202ENST00000396340 KIAA0232Q92628 1395 aa27.05■■□□□ 1.92
CDKN1B-202ENST00000396340 NRKQ7Z2Y5 1582 aa27.05■■□□□ 1.92
CDKN1B-202ENST00000396340 TTC21BQ7Z4L5 1316 aa27.04■■□□□ 1.92
CDKN1B-202ENST00000396340 PIK3C2AO00443 1686 aa27.02■■□□□ 1.92
CDKN1B-202ENST00000396340 NUTM2GQ5VZR2 741 aa27.02■■□□□ 1.92
CDKN1B-202ENST00000396340 EDC4Q6P2E9 1401 aaKnown RBP27.01■■□□□ 1.91
CDKN1B-202ENST00000396340 ONECUT3O60422 494 aaPredicted RBP27.01■■□□□ 1.91
CDKN1B-202ENST00000396340 GLI3P10071 1580 aa27.01■■□□□ 1.91
CDKN1B-202ENST00000396340 SLIT3O75094 1523 aa27■■□□□ 1.91
CDKN1B-202ENST00000396340 ZC3H6P61129 1189 aaKnown RBP27■■□□□ 1.91
CDKN1B-202ENST00000396340 EVA1CP58658 441 aa26.99■■□□□ 1.91
CDKN1B-202ENST00000396340 CCDC125Q86Z20 511 aa26.99■■□□□ 1.91
CDKN1B-202ENST00000396340 USP54Q70EL1 1684 aa26.98■■□□□ 1.91
CDKN1B-202ENST00000396340 SLC12A5Q9H2X9 1139 aa26.96■■□□□ 1.91
CDKN1B-202ENST00000396340 UPF1Q92900 1129 aaKnown RBP eCLIP26.95■■□□□ 1.9
CDKN1B-202ENST00000396340 AATKQ6ZMQ8 1374 aa26.95■■□□□ 1.9
CDKN1B-202ENST00000396340 USP31Q70CQ4 1352 aa26.95■■□□□ 1.9
CDKN1B-202ENST00000396340 CD163L1Q9NR16 1453 aa26.94■■□□□ 1.9
CDKN1B-202ENST00000396340 SPATA31A5Q5VU36 1347 aa26.94■■□□□ 1.9
CDKN1B-202ENST00000396340 SPATA31A7Q8IWB4 1347 aa26.94■■□□□ 1.9
CDKN1B-202ENST00000396340 LMO7Q8WWI1 1683 aa26.94■■□□□ 1.9
CDKN1B-202ENST00000396340 ABCC6O95255 1503 aa26.94■■□□□ 1.9
CDKN1B-202ENST00000396340 EIF4G2P78344 907 aaKnown RBP eCLIP26.93■■□□□ 1.9
CDKN1B-202ENST00000396340 THRAP3Q9Y2W1 955 aaKnown RBP26.92■■□□□ 1.9
CDKN1B-202ENST00000396340 A0A1W2PP64 1363 aa26.92■■□□□ 1.9
CDKN1B-202ENST00000396340 ANKRD36BQ8N2N9 1353 aa26.92■■□□□ 1.9
CDKN1B-202ENST00000396340 CHRNA2Q15822 529 aa26.91■■□□□ 1.9
CDKN1B-202ENST00000396340 SEPT12Q8IYM1 358 aa26.91■■□□□ 1.9
CDKN1B-202ENST00000396340 BRWD3Q6RI45 1802 aa26.89■■□□□ 1.9
CDKN1B-202ENST00000396340 A0A0G2JS52 829 aa26.89■■□□□ 1.9
CDKN1B-202ENST00000396340 MYT1Q01538 1121 aa26.89■■□□□ 1.9
CDKN1B-202ENST00000396340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.89■■□□□ 1.9
CDKN1B-202ENST00000396340 STRN4Q9NRL3 753 aa26.89■■□□□ 1.9
CDKN1B-202ENST00000396340 SPATA31A1Q5TZJ5 1347 aa26.89■■□□□ 1.89
CDKN1B-202ENST00000396340 CAMTA1Q9Y6Y1 1673 aa26.88■■□□□ 1.89
CDKN1B-202ENST00000396340 BARGINQ6ZT62 677 aa26.87■■□□□ 1.89
CDKN1B-202ENST00000396340 KRT27Q7Z3Y8 459 aa26.86■■□□□ 1.89
CDKN1B-202ENST00000396340 ARHGEF25Q86VW2 580 aa26.86■■□□□ 1.89
CDKN1B-202ENST00000396340 C11orf95C9JLR9 678 aaPredicted RBP26.85■■□□□ 1.89
CDKN1B-202ENST00000396340 FAM98CQ17RN3 349 aaKnown RBP26.85■■□□□ 1.89
CDKN1B-202ENST00000396340 COL5A2P05997 1499 aaPredicted RBP26.85■■□□□ 1.89
CDKN1B-202ENST00000396340 CRB1P82279 1406 aa26.83■■□□□ 1.89
CDKN1B-202ENST00000396340 TCP11L2Q8N4U5 519 aa26.83■■□□□ 1.89
CDKN1B-202ENST00000396340 COL18A1P39060 1754 aa26.83■■□□□ 1.89
CDKN1B-202ENST00000396340 NFAT5O94916 1531 aa26.82■■□□□ 1.88
CDKN1B-202ENST00000396340 COG3Q96JB2 828 aa26.82■■□□□ 1.88
CDKN1B-202ENST00000396340 THSD7AQ9UPZ6 1657 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms