RNA–Protein interactions for RNA: ENST00000395549.3

ATG13-202, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-202ENST00000395549 PAK3O75914 559 aaPredicted RBP23.49■■□□□ 1.35
ATG13-202ENST00000395549 CABP2Q9NPB3 220 aa23.48■■□□□ 1.35
ATG13-202ENST00000395549 POLR3AO14802 1390 aaPredicted RBP23.48■■□□□ 1.35
ATG13-202ENST00000395549 ACEP12821 1306 aa23.47■■□□□ 1.35
ATG13-202ENST00000395549 PPIP5K1Q6PFW1 1433 aa23.47■■□□□ 1.35
ATG13-202ENST00000395549 RALGAPBQ86X10 1494 aa23.47■■□□□ 1.35
ATG13-202ENST00000395549 PHRF1Q9P1Y6 1649 aaKnown RBP23.46■■□□□ 1.35
ATG13-202ENST00000395549 PLEKHG3A1L390 1219 aa23.45■■□□□ 1.34
ATG13-202ENST00000395549 COL14A1Q05707 1796 aaKnown RBP23.43■■□□□ 1.34
ATG13-202ENST00000395549 EVC2Q86UK5 1308 aa23.43■■□□□ 1.34
ATG13-202ENST00000395549 UNC5CLQ8IV45 518 aa23.43■■□□□ 1.34
ATG13-202ENST00000395549 NRAPQ86VF7 1730 aa23.42■■□□□ 1.34
ATG13-202ENST00000395549 CARD11Q9BXL7 1154 aa23.42■■□□□ 1.34
ATG13-202ENST00000395549 GLI3P10071 1580 aa23.42■■□□□ 1.34
ATG13-202ENST00000395549 GJD4Q96KN9 370 aaPredicted RBP23.39■■□□□ 1.33
ATG13-202ENST00000395549 AKAP12Q02952 1782 aa23.38■■□□□ 1.33
ATG13-202ENST00000395549 FAM83GA6ND36 823 aa23.38■■□□□ 1.33
ATG13-202ENST00000395549 NUTM2GQ5VZR2 741 aa23.37■■□□□ 1.33
ATG13-202ENST00000395549 UPF1Q92900 1129 aaKnown RBP eCLIP23.37■■□□□ 1.333e-7■■■□□ 18.2
ATG13-202ENST00000395549 CABP1Q9NZU7 370 aa23.37■■□□□ 1.33
ATG13-202ENST00000395549 NRKQ7Z2Y5 1582 aa23.35■■□□□ 1.33
ATG13-202ENST00000395549 SBNO2Q9Y2G9 1366 aa23.35■■□□□ 1.33
ATG13-202ENST00000395549 BRWD3Q6RI45 1802 aa23.35■■□□□ 1.33
ATG13-202ENST00000395549 USP6P35125 1406 aa23.34■■□□□ 1.33
ATG13-202ENST00000395549 VPS72Q15906 364 aa23.33■■□□□ 1.33
ATG13-202ENST00000395549 ABTB2Q8N961 1025 aa23.33■■□□□ 1.33
ATG13-202ENST00000395549 CCDC9Q9Y3X0 531 aaKnown RBP23.33■■□□□ 1.33
ATG13-202ENST00000395549 BRD4O60885 1362 aaPredicted RBP23.32■■□□□ 1.32
ATG13-202ENST00000395549 PCGF6Q9BYE7 350 aa23.32■■□□□ 1.32
ATG13-202ENST00000395549 PRDM11Q9NQV5 511 aa23.32■■□□□ 1.32
ATG13-202ENST00000395549 BTG4Q9NY30 223 aa23.32■■□□□ 1.32
ATG13-202ENST00000395549 ATAD2Q6PL18 1390 aa23.31■■□□□ 1.32
ATG13-202ENST00000395549 KIAA0232Q92628 1395 aa23.31■■□□□ 1.32
ATG13-202ENST00000395549 PIK3C2AO00443 1686 aa23.31■■□□□ 1.32
ATG13-202ENST00000395549 MON2Q7Z3U7 1717 aa23.29■■□□□ 1.32
ATG13-202ENST00000395549 USP19O94966 1318 aa23.29■■□□□ 1.32
ATG13-202ENST00000395549 ZC3H6P61129 1189 aaKnown RBP23.28■■□□□ 1.32
ATG13-202ENST00000395549 CHRNA2Q15822 529 aa23.27■■□□□ 1.32
ATG13-202ENST00000395549 NLRP13Q86W25 1043 aa23.27■■□□□ 1.32
ATG13-202ENST00000395549 SSH2Q76I76 1423 aa23.26■■□□□ 1.31
ATG13-202ENST00000395549 EP400Q96L91 3159 aa23.25■■□□□ 1.31
ATG13-202ENST00000395549 LMO7Q8WWI1 1683 aa23.24■■□□□ 1.31
ATG13-202ENST00000395549 CPSF1Q10570 1443 aaKnown RBP23.24■■□□□ 1.31
ATG13-202ENST00000395549 SLIT3O75094 1523 aa23.23■■□□□ 1.31
ATG13-202ENST00000395549 ZNF692Q9BU19 519 aaPredicted RBP23.23■■□□□ 1.31
ATG13-202ENST00000395549 CLSPNQ9HAW4 1339 aa23.23■■□□□ 1.31
ATG13-202ENST00000395549 NLRP6P59044 892 aa23.22■■□□□ 1.31
ATG13-202ENST00000395549 SEPT12Q8IYM1 358 aa23.22■■□□□ 1.31
ATG13-202ENST00000395549 CPDO75976 1380 aa23.22■■□□□ 1.31
ATG13-202ENST00000395549 GCP02774 474 aa23.21■■□□□ 1.31
ATG13-202ENST00000395549 KTN1Q86UP2 1357 aaKnown RBP23.21■■□□□ 1.31
ATG13-202ENST00000395549 SPATA31A5Q5VU36 1347 aa23.2■■□□□ 1.3
ATG13-202ENST00000395549 TTC21BQ7Z4L5 1316 aa23.2■■□□□ 1.3
ATG13-202ENST00000395549 SPATA31A7Q8IWB4 1347 aa23.2■■□□□ 1.3
ATG13-202ENST00000395549 ST20-MTHFSA0A0A6YYL1 179 aa23.2■■□□□ 1.3
ATG13-202ENST00000395549 A0A0G2JS52 829 aa23.2■■□□□ 1.3
ATG13-202ENST00000395549 MYT1Q01538 1121 aa23.2■■□□□ 1.3
ATG13-202ENST00000395549 STRN4Q9NRL3 753 aa23.2■■□□□ 1.3
ATG13-202ENST00000395549 CAMTA1Q9Y6Y1 1673 aa23.19■■□□□ 1.3
ATG13-202ENST00000395549 ONECUT3O60422 494 aaPredicted RBP23.19■■□□□ 1.3
ATG13-202ENST00000395549 FAM98CQ17RN3 349 aaKnown RBP23.19■■□□□ 1.3
ATG13-202ENST00000395549 CD163L1Q9NR16 1453 aa23.18■■□□□ 1.3
ATG13-202ENST00000395549 TTC21AQ8NDW8 1320 aa23.18■■□□□ 1.3
ATG13-202ENST00000395549 TMC1Q8TDI8 760 aa23.18■■□□□ 1.3
ATG13-202ENST00000395549 TESK2Q96S53 571 aa23.18■■□□□ 1.3
ATG13-202ENST00000395549 THSD7AQ9UPZ6 1657 aa23.18■■□□□ 1.3
ATG13-202ENST00000395549 USP47Q96K76 1375 aa23.17■■□□□ 1.3
ATG13-202ENST00000395549 ZBTB7CA1YPR0 619 aa23.16■■□□□ 1.3
ATG13-202ENST00000395549 TIMELESSQ9UNS1 1208 aa23.16■■□□□ 1.3
ATG13-202ENST00000395549 USP54Q70EL1 1684 aa23.15■■□□□ 1.3
ATG13-202ENST00000395549 COL18A1P39060 1754 aa23.14■■□□□ 1.3
ATG13-202ENST00000395549 RGPD5Q99666 1765 aa23.14■■□□□ 1.3
ATG13-202ENST00000395549 SPATA31A1Q5TZJ5 1347 aa23.14■■□□□ 1.3
ATG13-202ENST00000395549 EVA1CP58658 441 aa23.14■■□□□ 1.29
ATG13-202ENST00000395549 KRT27Q7Z3Y8 459 aa23.14■■□□□ 1.29
ATG13-202ENST00000395549 SLC12A5Q9H2X9 1139 aa23.14■■□□□ 1.29
ATG13-202ENST00000395549 HDGFL2Q7Z4V5 671 aaPredicted RBP23.13■■□□□ 1.29
ATG13-202ENST00000395549 PUS7Q96PZ0 661 aaKnown RBP23.13■■□□□ 1.29
ATG13-202ENST00000395549 COL5A2P05997 1499 aaPredicted RBP23.12■■□□□ 1.29
ATG13-202ENST00000395549 CCER1Q8TC90 406 aaPredicted RBP23.12■■□□□ 1.29
ATG13-202ENST00000395549 SLC24A1O60721 1099 aa23.11■■□□□ 1.29
ATG13-202ENST00000395549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.11■■□□□ 1.29
ATG13-202ENST00000395549 NFAT5O94916 1531 aa23.11■■□□□ 1.29
ATG13-202ENST00000395549 A0A1W2PP64 1363 aa23.11■■□□□ 1.29
ATG13-202ENST00000395549 EDC4Q6P2E9 1401 aaKnown RBP23.1■■□□□ 1.29
ATG13-202ENST00000395549 SOX12O15370 315 aa23.1■■□□□ 1.29
ATG13-202ENST00000395549 LARP1Q6PKG0 1096 aaKnown RBP23.1■■□□□ 1.29
ATG13-202ENST00000395549 AATKQ6ZMQ8 1374 aa23.1■■□□□ 1.29
ATG13-202ENST00000395549 CCDC125Q86Z20 511 aa23.09■■□□□ 1.29
ATG13-202ENST00000395549 KCNH5Q8NCM2 988 aa23.09■■□□□ 1.29
ATG13-202ENST00000395549 TERF2IPQ9NYB0 399 aa23.09■■□□□ 1.29
ATG13-202ENST00000395549 USP35Q9P2H5 1018 aa23.09■■□□□ 1.29
ATG13-202ENST00000395549 NINLQ9Y2I6 1382 aa23.09■■□□□ 1.29
ATG13-202ENST00000395549 BLMP54132 1417 aaPredicted RBP23.08■■□□□ 1.29
ATG13-202ENST00000395549 ZRANB1Q9UGI0 708 aa23.08■■□□□ 1.29
ATG13-202ENST00000395549 LTN1O94822 1766 aa23.08■■□□□ 1.29
ATG13-202ENST00000395549 NME9Q86XW9 330 aa23.07■■□□□ 1.28
ATG13-202ENST00000395549 USP31Q70CQ4 1352 aa23.06■■□□□ 1.28
ATG13-202ENST00000395549 TMF1P82094 1093 aa23.06■■□□□ 1.28
ATG13-202ENST00000395549 WNK3Q9BYP7 1800 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms