RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 A0A0G2JS52 829 aa28.01■■■□□ 2.07
COL11A2-204ENST00000395194 MYT1Q01538 1121 aa28.01■■■□□ 2.07
COL11A2-204ENST00000395194 CCDC125Q86Z20 511 aa28.01■■■□□ 2.07
COL11A2-204ENST00000395194 NUDT16Q96DE0 195 aaKnown RBP28.01■■■□□ 2.07
COL11A2-204ENST00000395194 BTG4Q9NY30 223 aa28.01■■■□□ 2.07
COL11A2-204ENST00000395194 ZRANB1Q9UGI0 708 aa27.99■■■□□ 2.07
COL11A2-204ENST00000395194 BLMP54132 1417 aaPredicted RBP27.99■■■□□ 2.07
COL11A2-204ENST00000395194 TOPAZ1Q8N9V7 1692 aa27.98■■■□□ 2.07
COL11A2-204ENST00000395194 CDK19Q9BWU1 502 aa27.98■■■□□ 2.07
COL11A2-204ENST00000395194 FAM98CQ17RN3 349 aaKnown RBP27.96■■■□□ 2.07
COL11A2-204ENST00000395194 NBPF1Q3BBV0 1214 aa27.96■■■□□ 2.07
COL11A2-204ENST00000395194 PHRF1Q9P1Y6 1649 aaKnown RBP27.96■■■□□ 2.07
COL11A2-204ENST00000395194 KRT27Q7Z3Y8 459 aa27.95■■■□□ 2.06
COL11A2-204ENST00000395194 DEFB132Q7Z7B7 95 aa27.95■■■□□ 2.06
COL11A2-204ENST00000395194 NUTM2GQ5VZR2 741 aa27.94■■■□□ 2.06
COL11A2-204ENST00000395194 ONECUT3O60422 494 aaPredicted RBP27.93■■■□□ 2.06
COL11A2-204ENST00000395194 PRDM11Q9NQV5 511 aa27.93■■■□□ 2.06
COL11A2-204ENST00000395194 SF3B2Q13435 895 aaKnown RBP27.91■■■□□ 2.06
COL11A2-204ENST00000395194 ACEP12821 1306 aa27.9■■■□□ 2.06
COL11A2-204ENST00000395194 KIAA0232Q92628 1395 aa27.89■■■□□ 2.06
COL11A2-204ENST00000395194 CHRNA2Q15822 529 aa27.89■■■□□ 2.06
COL11A2-204ENST00000395194 QRICH2Q9H0J4 1663 aa27.87■■■□□ 2.05
COL11A2-204ENST00000395194 POLR3AO14802 1390 aaPredicted RBP27.86■■■□□ 2.05
COL11A2-204ENST00000395194 ZC3H6P61129 1189 aaKnown RBP27.86■■■□□ 2.05
COL11A2-204ENST00000395194 CCDC61Q9Y6R9 512 aa27.86■■■□□ 2.05
COL11A2-204ENST00000395194 SPATA31A5Q5VU36 1347 aa27.86■■■□□ 2.05
COL11A2-204ENST00000395194 SPATA31A7Q8IWB4 1347 aa27.86■■■□□ 2.05
COL11A2-204ENST00000395194 NBPF8Q3BBV2 869 aa27.85■■■□□ 2.05
COL11A2-204ENST00000395194 FAM182BQ5T319 152 aa27.85■■■□□ 2.05
COL11A2-204ENST00000395194 SRPK2P78362 688 aaKnown RBP27.84■■■□□ 2.05
COL11A2-204ENST00000395194 THSD7AQ9UPZ6 1657 aa27.84■■■□□ 2.05
COL11A2-204ENST00000395194 STRN4Q9NRL3 753 aa27.83■■■□□ 2.05
COL11A2-204ENST00000395194 CENPJQ9HC77 1338 aaPredicted RBP27.83■■■□□ 2.05
COL11A2-204ENST00000395194 NRKQ7Z2Y5 1582 aa27.82■■■□□ 2.04
COL11A2-204ENST00000395194 CABP2Q9NPB3 220 aa27.82■■■□□ 2.04
COL11A2-204ENST00000395194 PPIP5K1Q6PFW1 1433 aa27.82■■■□□ 2.04
COL11A2-204ENST00000395194 PLEKHG3A1L390 1219 aa27.81■■■□□ 2.04
COL11A2-204ENST00000395194 ABTB2Q8N961 1025 aa27.8■■■□□ 2.04
COL11A2-204ENST00000395194 RGPD1P0DJD0 1748 aa27.79■■■□□ 2.04
COL11A2-204ENST00000395194 L3MBTL2Q969R5 705 aa27.79■■■□□ 2.04
COL11A2-204ENST00000395194 SIN3AQ96ST3 1273 aa27.78■■■□□ 2.04
COL11A2-204ENST00000395194 SPATA31A1Q5TZJ5 1347 aa27.77■■■□□ 2.04
COL11A2-204ENST00000395194 TRPM1Q7Z4N2 1603 aa27.77■■■□□ 2.04
COL11A2-204ENST00000395194 BAG6P46379 1132 aa27.76■■■□□ 2.03
COL11A2-204ENST00000395194 USP35Q9P2H5 1018 aa27.76■■■□□ 2.03
COL11A2-204ENST00000395194 TNS1Q9HBL0 1735 aaKnown RBP27.74■■■□□ 2.03
COL11A2-204ENST00000395194 CAMTA1Q9Y6Y1 1673 aa27.73■■■□□ 2.03
COL11A2-204ENST00000395194 NEUROD1Q13562 356 aa27.73■■■□□ 2.03
COL11A2-204ENST00000395194 SSH2Q76I76 1423 aa27.73■■■□□ 2.03
COL11A2-204ENST00000395194 LMO7Q8WWI1 1683 aa27.72■■■□□ 2.03
COL11A2-204ENST00000395194 EVA1CP58658 441 aa27.72■■■□□ 2.03
COL11A2-204ENST00000395194 USP19O94966 1318 aa27.71■■■□□ 2.03
COL11A2-204ENST00000395194 EN1Q05925 392 aaPredicted RBP27.71■■■□□ 2.03
COL11A2-204ENST00000395194 PSDA5PKW4 1024 aaPredicted RBP27.7■■■□□ 2.02
COL11A2-204ENST00000395194 CABP1Q9NZU7 370 aa27.7■■■□□ 2.02
COL11A2-204ENST00000395194 ZBTB7CA1YPR0 619 aa27.69■■■□□ 2.02
COL11A2-204ENST00000395194 LARP1Q6PKG0 1096 aaKnown RBP27.68■■■□□ 2.02
COL11A2-204ENST00000395194 NLRP13Q86W25 1043 aa27.68■■■□□ 2.02
COL11A2-204ENST00000395194 CPDO75976 1380 aa27.67■■■□□ 2.02
COL11A2-204ENST00000395194 USP6P35125 1406 aa27.67■■■□□ 2.02
COL11A2-204ENST00000395194 GCP02774 474 aa27.66■■■□□ 2.02
COL11A2-204ENST00000395194 ROCK2O75116 1388 aaKnown RBP27.65■■■□□ 2.02
COL11A2-204ENST00000395194 PIK3C2AO00443 1686 aa27.64■■■□□ 2.02
COL11A2-204ENST00000395194 TRIM37O94972 964 aa27.63■■■□□ 2.01
COL11A2-204ENST00000395194 EVC2Q86UK5 1308 aa27.63■■■□□ 2.01
COL11A2-204ENST00000395194 NLRP6P59044 892 aa27.62■■■□□ 2.01
COL11A2-204ENST00000395194 TCP11L2Q8N4U5 519 aa27.61■■■□□ 2.01
COL11A2-204ENST00000395194 COL5A2P05997 1499 aaPredicted RBP27.61■■■□□ 2.01
COL11A2-204ENST00000395194 AKAP12Q02952 1782 aa27.6■■■□□ 2.01
COL11A2-204ENST00000395194 LRP5O75197 1615 aa27.6■■■□□ 2.01
COL11A2-204ENST00000395194 EZH2Q15910 746 aaKnown RBP27.6■■■□□ 2.01
COL11A2-204ENST00000395194 FAM196AQ6ZSG2 479 aa27.6■■■□□ 2.01
COL11A2-204ENST00000395194 BARGINQ6ZT62 677 aa27.6■■■□□ 2.01
COL11A2-204ENST00000395194 BRD4O60885 1362 aaPredicted RBP27.6■■■□□ 2.01
COL11A2-204ENST00000395194 DISP2A7MBM2 1401 aa27.59■■■□□ 2.01
COL11A2-204ENST00000395194 SLIT3O75094 1523 aa27.59■■■□□ 2.01
COL11A2-204ENST00000395194 PDE3BQ13370 1112 aa27.59■■■□□ 2.01
COL11A2-204ENST00000395194 PARP4Q9UKK3 1724 aaKnown RBP27.57■■■□□ 2
COL11A2-204ENST00000395194 R3HDM1Q15032 1099 aaKnown RBP27.56■■■□□ 2
COL11A2-204ENST00000395194 RGPD5Q99666 1765 aa27.55■■■□□ 2
COL11A2-204ENST00000395194 APBA3O96018 575 aa27.54■■■□□ 2
COL11A2-204ENST00000395194 COL18A1P39060 1754 aa27.54■■■□□ 2
COL11A2-204ENST00000395194 CRB1P82279 1406 aa27.53■■■□□ 2
COL11A2-204ENST00000395194 SOX12O15370 315 aa27.53■■■□□ 2
COL11A2-204ENST00000395194 CAMKK2Q96RR4 588 aa27.52■■■□□ 2
COL11A2-204ENST00000395194 AATKQ6ZMQ8 1374 aa27.51■■□□□ 1.99
COL11A2-204ENST00000395194 TTC21BQ7Z4L5 1316 aa27.51■■□□□ 1.99
COL11A2-204ENST00000395194 THRAP3Q9Y2W1 955 aaKnown RBP27.51■■□□□ 1.99
COL11A2-204ENST00000395194 WNK3Q9BYP7 1800 aa27.51■■□□□ 1.99
COL11A2-204ENST00000395194 RREB1Q92766 1687 aa27.5■■□□□ 1.99
COL11A2-204ENST00000395194 LRRC37A3O60309 1634 aa27.49■■□□□ 1.99
COL11A2-204ENST00000395194 NUP188Q5SRE5 1749 aa27.48■■□□□ 1.99
COL11A2-204ENST00000395194 MON2Q7Z3U7 1717 aa27.48■■□□□ 1.99
COL11A2-204ENST00000395194 TOM1L2Q6ZVM7 507 aa27.48■■□□□ 1.99
COL11A2-204ENST00000395194 AXIN2Q9Y2T1 843 aa27.47■■□□□ 1.99
COL11A2-204ENST00000395194 CPSF1Q10570 1443 aaKnown RBP27.47■■□□□ 1.99
COL11A2-204ENST00000395194 ZNF692Q9BU19 519 aaPredicted RBP27.46■■□□□ 1.99
COL11A2-204ENST00000395194 KTN1Q86UP2 1357 aaKnown RBP27.46■■□□□ 1.99
COL11A2-204ENST00000395194 SBF2Q86WG5 1849 aa27.46■■□□□ 1.99
COL11A2-204ENST00000395194 PEAK1Q9H792 1746 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms