RNA–Protein interactions for RNA: ENST00000394886.6

CDC23-202, Transcript of cell division cycle 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC23, Length 3,155 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-202ENST00000394886 DUSP27Q5VZP5 1158 aa6.41□□□□□ -1.38
CDC23-202ENST00000394886 PAXIP1Q6ZW49 1069 aaPredicted RBP6.41□□□□□ -1.38
CDC23-202ENST00000394886 CHMP4AQ9BY43 222 aa6.41□□□□□ -1.38
CDC23-202ENST00000394886 TRPM1Q7Z4N2 1603 aa6.4□□□□□ -1.38
CDC23-202ENST00000394886 CAVIN1Q6NZI2 390 aaKnown RBP6.4□□□□□ -1.38
CDC23-202ENST00000394886 TESK2Q96S53 571 aa6.4□□□□□ -1.38
CDC23-202ENST00000394886 DNAJC5Q9H3Z4 198 aa6.4□□□□□ -1.38
CDC23-202ENST00000394886 LRPPRCP42704 1394 aaKnown RBP6.4□□□□□ -1.39
CDC23-202ENST00000394886 TBC1D32Q96NH3 1257 aa6.4□□□□□ -1.39
CDC23-202ENST00000394886 KIF1BO60333 1816 aa6.4□□□□□ -1.39
CDC23-202ENST00000394886 DISP3Q9P2K9 1392 aa6.39□□□□□ -1.39
CDC23-202ENST00000394886 CGNQ9P2M7 1197 aaKnown RBP6.39□□□□□ -1.39
CDC23-202ENST00000394886 MROH2AA6NES4 1674 aa6.39□□□□□ -1.39
CDC23-202ENST00000394886 CAMSAP1Q5T5Y3 1602 aa6.39□□□□□ -1.39
CDC23-202ENST00000394886 PLEKHH1Q9ULM0 1364 aa6.39□□□□□ -1.39
CDC23-202ENST00000394886 LMTK2Q8IWU2 1503 aa6.39□□□□□ -1.39
CDC23-202ENST00000394886 OFD1O75665 1012 aa6.39□□□□□ -1.39
CDC23-202ENST00000394886 SSFA2P28290 1259 aa6.39□□□□□ -1.39
CDC23-202ENST00000394886 CHAMP1Q96JM3 812 aa6.39□□□□□ -1.39
CDC23-202ENST00000394886 GBP4Q96PP9 640 aa6.39□□□□□ -1.39
CDC23-202ENST00000394886 GTF2E1P29083 439 aaPredicted RBP6.39□□□□□ -1.39
CDC23-202ENST00000394886 MCTP1Q6DN14 999 aa6.39□□□□□ -1.39
CDC23-202ENST00000394886 RBM27Q9P2N5 1060 aaKnown RBP6.39□□□□□ -1.39
CDC23-202ENST00000394886 DMRT2Q9Y5R5 561 aa6.39□□□□□ -1.39
CDC23-202ENST00000394886 ZMYM4Q5VZL5 1548 aa6.38□□□□□ -1.39
CDC23-202ENST00000394886 TMF1P82094 1093 aa6.38□□□□□ -1.39
CDC23-202ENST00000394886 ZNF830Q96NB3 372 aaPredicted RBP6.38□□□□□ -1.39
CDC23-202ENST00000394886 TRERF1Q96PN7 1200 aa6.38□□□□□ -1.39
CDC23-202ENST00000394886 MAPK8IP3Q9UPT6 1336 aa6.38□□□□□ -1.39
CDC23-202ENST00000394886 CCDC173Q0VFZ6 552 aa6.38□□□□□ -1.39
CDC23-202ENST00000394886 C17orf53Q8N3J3 647 aaPredicted RBP6.38□□□□□ -1.39
CDC23-202ENST00000394886 RBM42Q9BTD8 480 aaKnown RBP6.38□□□□□ -1.39
CDC23-202ENST00000394886 SLC52A1Q9NWF4 448 aa6.38□□□□□ -1.39
CDC23-202ENST00000394886 PCDHB15Q9Y5E8 787 aa6.38□□□□□ -1.39
CDC23-202ENST00000394886 GPRASP1Q5JY77 1395 aa6.37□□□□□ -1.39
CDC23-202ENST00000394886 PPP4R3BQ5MIZ7 849 aa6.37□□□□□ -1.39
CDC23-202ENST00000394886 SYNMO15061 1565 aa6.37□□□□□ -1.39
CDC23-202ENST00000394886 ZMYM3Q14202 1370 aa6.37□□□□□ -1.39
CDC23-202ENST00000394886 MADDQ8WXG6 1647 aa6.37□□□□□ -1.39
CDC23-202ENST00000394886 CLTCQ00610 1675 aaKnown RBP6.37□□□□□ -1.39
CDC23-202ENST00000394886 GOLGA6L22H0YM25 854 aa6.37□□□□□ -1.39
CDC23-202ENST00000394886 VGFO15240 615 aaPredicted RBP6.37□□□□□ -1.39
CDC23-202ENST00000394886 ZNF771Q7L3S4 317 aaPredicted RBP6.37□□□□□ -1.39
CDC23-202ENST00000394886 STAC3Q96MF2 364 aa6.36□□□□□ -1.39
CDC23-202ENST00000394886 C14orf93Q9H972 538 aaKnown RBP6.36□□□□□ -1.39
CDC23-202ENST00000394886 CENPJQ9HC77 1338 aaPredicted RBP6.36□□□□□ -1.39
CDC23-202ENST00000394886 CERS3Q8IU89 383 aa6.36□□□□□ -1.39
CDC23-202ENST00000394886 AEBP1Q8IUX7 1158 aa6.36□□□□□ -1.39
CDC23-202ENST00000394886 SMAP1Q8IYB5 467 aaPredicted RBP6.36□□□□□ -1.39
CDC23-202ENST00000394886 MYO5BQ9ULV0 1848 aa6.36□□□□□ -1.39
CDC23-202ENST00000394886 KNSTRNQ9Y448 316 aa6.36□□□□□ -1.39
CDC23-202ENST00000394886 AK9Q5TCS8 1911 aa6.35□□□□□ -1.39
CDC23-202ENST00000394886 NOL8Q76FK4 1167 aaKnown RBP6.35□□□□□ -1.39
CDC23-202ENST00000394886 MAP7D2Q96T17 732 aa6.35□□□□□ -1.39
CDC23-202ENST00000394886 RLBP1P12271 317 aa6.35□□□□□ -1.39
CDC23-202ENST00000394886 ARHGAP31Q2M1Z3 1444 aa6.35□□□□□ -1.39
CDC23-202ENST00000394886 FTSJ3Q8IY81 847 aaKnown RBP6.35□□□□□ -1.39
CDC23-202ENST00000394886 LNPKQ9C0E8 428 aa6.35□□□□□ -1.39
CDC23-202ENST00000394886 ADGRB3O60242 1522 aa6.35□□□□□ -1.39
CDC23-202ENST00000394886 ERVK-7P63135 1459 aa6.35□□□□□ -1.39
CDC23-202ENST00000394886 SCAF11Q99590 1463 aaKnown RBP6.35□□□□□ -1.39
CDC23-202ENST00000394886 RPGRIP1LQ68CZ1 1315 aa6.35□□□□□ -1.39
CDC23-202ENST00000394886 ZBTB9Q96C00 473 aa6.34□□□□□ -1.39
CDC23-202ENST00000394886 RBSNQ9H1K0 784 aa6.34□□□□□ -1.39
CDC23-202ENST00000394886 PREX1Q8TCU6 1659 aa6.34□□□□□ -1.39
CDC23-202ENST00000394886 ARHGEF40Q8TER5 1519 aa6.34□□□□□ -1.39
CDC23-202ENST00000394886 SLFN5Q08AF3 891 aa6.34□□□□□ -1.39
CDC23-202ENST00000394886 PRPF40AO75400 957 aaKnown RBP6.34□□□□□ -1.4
CDC23-202ENST00000394886 CD2BP2O95400 341 aaKnown RBP6.34□□□□□ -1.4
CDC23-202ENST00000394886 PPP6R1Q9UPN7 881 aa6.34□□□□□ -1.4
CDC23-202ENST00000394886 AGLP35573 1532 aa6.34□□□□□ -1.4
CDC23-202ENST00000394886 CGNL1Q0VF96 1302 aa6.33□□□□□ -1.4
CDC23-202ENST00000394886 MINK1Q8N4C8 1332 aaPredicted RBP6.33□□□□□ -1.4
CDC23-202ENST00000394886 PIK3C2BO00750 1634 aa6.33□□□□□ -1.4
CDC23-202ENST00000394886 SYCE3A1L190 88 aa6.33□□□□□ -1.4
CDC23-202ENST00000394886 PER1O15534 1290 aaPredicted RBP6.33□□□□□ -1.4
CDC23-202ENST00000394886 PRIM1P49642 420 aaKnown RBP6.33□□□□□ -1.4
CDC23-202ENST00000394886 DMTNQ08495 405 aa6.33□□□□□ -1.4
CDC23-202ENST00000394886 WAPLQ7Z5K2 1190 aa6.33□□□□□ -1.4
CDC23-202ENST00000394886 ITPRIPQ8IWB1 547 aa6.33□□□□□ -1.4
CDC23-202ENST00000394886 SLC12A5Q9H2X9 1139 aa6.33□□□□□ -1.4
CDC23-202ENST00000394886 RWDD1Q9H446 243 aaPredicted RBP6.33□□□□□ -1.4
CDC23-202ENST00000394886 PPLO60437 1756 aa6.33□□□□□ -1.4
CDC23-202ENST00000394886 POLR1AO95602 1720 aaPredicted RBP6.33□□□□□ -1.4
CDC23-202ENST00000394886 ERICH4A6NGS2 130 aa6.32□□□□□ -1.4
CDC23-202ENST00000394886 PPP2R1AP30153 589 aa6.32□□□□□ -1.4
CDC23-202ENST00000394886 ATP2B3Q16720 1220 aa6.32□□□□□ -1.4
CDC23-202ENST00000394886 PMFBP1Q8TBY8 1022 aa6.32□□□□□ -1.4
CDC23-202ENST00000394886 CCDC94Q9BW85 323 aaPredicted RBP6.32□□□□□ -1.4
CDC23-202ENST00000394886 CABP2Q9NPB3 220 aa6.32□□□□□ -1.4
CDC23-202ENST00000394886 MYOM2P54296 1465 aa6.32□□□□□ -1.4
CDC23-202ENST00000394886 PIK3C2GO75747 1445 aa6.32□□□□□ -1.4
CDC23-202ENST00000394886 APBB1O00213 710 aa6.32□□□□□ -1.4
CDC23-202ENST00000394886 ZSCAN20P17040 1043 aaPredicted RBP6.32□□□□□ -1.4
CDC23-202ENST00000394886 U2AF2P26368 475 aaKnown RBP eCLIP6.32□□□□□ -1.4
CDC23-202ENST00000394886 SASS6Q6UVJ0 657 aa6.32□□□□□ -1.4
CDC23-202ENST00000394886 DYNC1I1O14576 645 aa6.32□□□□□ -1.4
CDC23-202ENST00000394886 GAS2L2Q8NHY3 880 aa6.32□□□□□ -1.4
CDC23-202ENST00000394886 PRAM1Q96QH2 718 aa6.32□□□□□ -1.4
CDC23-202ENST00000394886 IFT172Q9UG01 1749 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms