RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 ZNF521Q96K83 1311 aa19.88■□□□□ 0.77
CCT4-201ENST00000394440 PLEKHG3A1L390 1219 aa19.87■□□□□ 0.77
CCT4-201ENST00000394440 CFAP53Q96M91 514 aa19.87■□□□□ 0.77
CCT4-201ENST00000394440 ZNF692Q9BU19 519 aaPredicted RBP19.86■□□□□ 0.77
CCT4-201ENST00000394440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.86■□□□□ 0.77
CCT4-201ENST00000394440 RNF123Q5XPI4 1314 aa19.86■□□□□ 0.77
CCT4-201ENST00000394440 NWD1Q149M9 1564 aa19.85■□□□□ 0.77
CCT4-201ENST00000394440 PNPLA6Q8IY17 1366 aa19.85■□□□□ 0.77
CCT4-201ENST00000394440 IQSEC2Q5JU85 1478 aa19.85■□□□□ 0.77
CCT4-201ENST00000394440 ANKARQ7Z5J8 1434 aa19.84■□□□□ 0.77
CCT4-201ENST00000394440 CCDC146Q8IYE0 955 aa19.84■□□□□ 0.77
CCT4-201ENST00000394440 USP6P35125 1406 aa19.83■□□□□ 0.77
CCT4-201ENST00000394440 CDCA7LQ96GN5 454 aa19.83■□□□□ 0.76
CCT4-201ENST00000394440 SSH2Q76I76 1423 aa19.82■□□□□ 0.76
CCT4-201ENST00000394440 ACEP12821 1306 aa19.82■□□□□ 0.76
CCT4-201ENST00000394440 DMRT2Q9Y5R5 561 aa19.82■□□□□ 0.76
CCT4-201ENST00000394440 NME9Q86XW9 330 aa19.82■□□□□ 0.76
CCT4-201ENST00000394440 APAF1O14727 1248 aa19.81■□□□□ 0.76
CCT4-201ENST00000394440 NGEFQ8N5V2 710 aa19.81■□□□□ 0.76
CCT4-201ENST00000394440 AATKQ6ZMQ8 1374 aa19.81■□□□□ 0.76
CCT4-201ENST00000394440 NUTM2FA1L443 756 aa19.8■□□□□ 0.76
CCT4-201ENST00000394440 TTC21BQ7Z4L5 1316 aa19.79■□□□□ 0.76
CCT4-201ENST00000394440 OVOS2A0A0J9YW53 1432 aa19.78■□□□□ 0.76
CCT4-201ENST00000394440 OVOS2Q6IE36 1432 aa19.78■□□□□ 0.76
CCT4-201ENST00000394440 ERICH6BQ5W0A0 696 aa19.78■□□□□ 0.76
CCT4-201ENST00000394440 POLKQ9UBT6 870 aa19.78■□□□□ 0.76
CCT4-201ENST00000394440 RUNDC1Q96C34 613 aa19.77■□□□□ 0.76
CCT4-201ENST00000394440 ZRANB1Q9UGI0 708 aa19.77■□□□□ 0.76
CCT4-201ENST00000394440 CDK12Q9NYV4 1490 aaPredicted RBP19.77■□□□□ 0.76
CCT4-201ENST00000394440 ADGRL3Q9HAR2 1447 aa19.77■□□□□ 0.76
CCT4-201ENST00000394440 IRX6P78412 446 aaPredicted RBP19.76■□□□□ 0.75
CCT4-201ENST00000394440 CERKQ8TCT0 537 aa19.76■□□□□ 0.75
CCT4-201ENST00000394440 COG3Q96JB2 828 aa19.75■□□□□ 0.75
CCT4-201ENST00000394440 USP54Q70EL1 1684 aa19.74■□□□□ 0.75
CCT4-201ENST00000394440 GOLGA2Q08379 1002 aa19.74■□□□□ 0.75
CCT4-201ENST00000394440 DUSP27Q5VZP5 1158 aa19.74■□□□□ 0.75
CCT4-201ENST00000394440 PIK3C2AO00443 1686 aa19.74■□□□□ 0.75
CCT4-201ENST00000394440 FBLN1P23142 703 aa19.73■□□□□ 0.75
CCT4-201ENST00000394440 NCBP3Q53F19 620 aaKnown RBP19.73■□□□□ 0.75
CCT4-201ENST00000394440 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
CCT4-201ENST00000394440 U2AF1L5P0DN76 240 aaPredicted RBP19.73■□□□□ 0.75
CCT4-201ENST00000394440 U2AF1Q01081 240 aaKnown RBP eCLIP19.73■□□□□ 0.752e-10■■□□□ 12
CCT4-201ENST00000394440 TRMT2AQ8IZ69 625 aaKnown RBP19.73■□□□□ 0.75
CCT4-201ENST00000394440 RCAN3Q9UKA8 241 aa19.72■□□□□ 0.75
CCT4-201ENST00000394440 TTC21AQ8NDW8 1320 aa19.72■□□□□ 0.75
CCT4-201ENST00000394440 DIAPH1O60610 1272 aaKnown RBP19.72■□□□□ 0.75
CCT4-201ENST00000394440 SLFN5Q08AF3 891 aa19.72■□□□□ 0.75
CCT4-201ENST00000394440 PMFBP1Q8TBY8 1022 aa19.72■□□□□ 0.75
CCT4-201ENST00000394440 MARF1Q9Y4F3 1742 aaKnown RBP19.72■□□□□ 0.75
CCT4-201ENST00000394440 TCP11L2Q8N4U5 519 aa19.71■□□□□ 0.75
CCT4-201ENST00000394440 USP31Q70CQ4 1352 aa19.71■□□□□ 0.75
CCT4-201ENST00000394440 EMILIN1Q9Y6C2 1016 aa19.71■□□□□ 0.75
CCT4-201ENST00000394440 PLEKHF1Q96S99 279 aa19.7■□□□□ 0.74
CCT4-201ENST00000394440 LRRC7Q96NW7 1537 aa19.7■□□□□ 0.74
CCT4-201ENST00000394440 WWC1Q8IX03 1113 aa19.69■□□□□ 0.74
CCT4-201ENST00000394440 CCDC27Q2M243 656 aa19.69■□□□□ 0.74
CCT4-201ENST00000394440 STRCP1A6NGW2 1772 aa19.68■□□□□ 0.74
CCT4-201ENST00000394440 PEAK1Q9H792 1746 aa19.68■□□□□ 0.74
CCT4-201ENST00000394440 SPINK5Q9NQ38 1064 aaPredicted RBP19.68■□□□□ 0.74
CCT4-201ENST00000394440 U2SURPO15042 1029 aaKnown RBP19.68■□□□□ 0.74
CCT4-201ENST00000394440 NGDNQ8NEJ9 315 aaKnown RBP19.68■□□□□ 0.74
CCT4-201ENST00000394440 RRP1P56182 461 aaKnown RBP19.67■□□□□ 0.74
CCT4-201ENST00000394440 RBM33Q96EV2 1170 aaKnown RBP19.66■□□□□ 0.74
CCT4-201ENST00000394440 LTBP4Q8N2S1 1624 aa19.66■□□□□ 0.74
CCT4-201ENST00000394440 E9PSI1 815 aa19.66■□□□□ 0.74
CCT4-201ENST00000394440 PPM1GO15355 546 aaPredicted RBP19.65■□□□□ 0.74
CCT4-201ENST00000394440 IL13P35225 146 aa19.65■□□□□ 0.74
CCT4-201ENST00000394440 RRS1Q15050 365 aaKnown RBP19.65■□□□□ 0.74
CCT4-201ENST00000394440 RRP7AQ9Y3A4 280 aaKnown RBP19.65■□□□□ 0.74
CCT4-201ENST00000394440 PPP4R2Q9NY27 417 aa19.64■□□□□ 0.74
CCT4-201ENST00000394440 FCHSD2O94868 740 aa19.63■□□□□ 0.73
CCT4-201ENST00000394440 RGPD1P0DJD0 1748 aa19.62■□□□□ 0.73
CCT4-201ENST00000394440 WDR63Q8IWG1 891 aa19.62■□□□□ 0.73
CCT4-201ENST00000394440 PHF8Q9UPP1 1060 aa19.62■□□□□ 0.73
CCT4-201ENST00000394440 RSPH6AQ9H0K4 717 aa19.62■□□□□ 0.73
CCT4-201ENST00000394440 NEUROD2Q15784 382 aa19.61■□□□□ 0.73
CCT4-201ENST00000394440 PNNQ9H307 717 aaKnown RBP19.61■□□□□ 0.73
CCT4-201ENST00000394440 TMPOP42166 694 aaKnown RBP19.6■□□□□ 0.73
CCT4-201ENST00000394440 MAPK8IP3Q9UPT6 1336 aa19.6■□□□□ 0.73
CCT4-201ENST00000394440 PROSER2Q86WR7 435 aaPredicted RBP19.58■□□□□ 0.73
CCT4-201ENST00000394440 KIF1AQ12756 1690 aa19.58■□□□□ 0.72
CCT4-201ENST00000394440 NCOA3Q9Y6Q9 1424 aa19.57■□□□□ 0.72
CCT4-201ENST00000394440 DLG5Q8TDM6 1919 aa19.57■□□□□ 0.72
CCT4-201ENST00000394440 TRIM35Q9UPQ4 493 aa19.57■□□□□ 0.72
CCT4-201ENST00000394440 PRKAR2BP31323 418 aa19.56■□□□□ 0.72
CCT4-201ENST00000394440 ZNF335Q9H4Z2 1342 aaPredicted RBP19.56■□□□□ 0.72
CCT4-201ENST00000394440 C14orf37Q86TY3 774 aa19.56■□□□□ 0.72
CCT4-201ENST00000394440 TRPM3Q9HCF6 1732 aaPredicted RBP19.55■□□□□ 0.72
CCT4-201ENST00000394440 SBNO1A3KN83 1393 aa19.55■□□□□ 0.72
CCT4-201ENST00000394440 MAP3K19Q56UN5 1328 aa19.55■□□□□ 0.72
CCT4-201ENST00000394440 DCCP43146 1447 aa19.55■□□□□ 0.72
CCT4-201ENST00000394440 XIRP1Q702N8 1843 aaKnown RBP19.55■□□□□ 0.72
CCT4-201ENST00000394440 EIF4A2Q14240 407 aaKnown RBP19.55■□□□□ 0.72
CCT4-201ENST00000394440 ESCO1Q5FWF5 840 aa19.54■□□□□ 0.72
CCT4-201ENST00000394440 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
CCT4-201ENST00000394440 C1orf167Q5SNV9 1468 aa19.54■□□□□ 0.72
CCT4-201ENST00000394440 FLT4P35916 1363 aa19.54■□□□□ 0.72
CCT4-201ENST00000394440 HMOX1P09601 288 aa19.54■□□□□ 0.72
CCT4-201ENST00000394440 NLRP6P59044 892 aa19.54■□□□□ 0.72
CCT4-201ENST00000394440 C19orf44Q9H6X5 657 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms