RNA–Protein interactions for RNA: ENST00000394310.7

CACNB1-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CACNB1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-203ENST00000394310 NGDNQ8NEJ9 315 aaKnown RBP29.7■■■□□ 2.35
CACNB1-203ENST00000394310 PMFBP1Q8TBY8 1022 aa29.7■■■□□ 2.35
CACNB1-203ENST00000394310 PHF8Q9UPP1 1060 aa29.69■■■□□ 2.34
CACNB1-203ENST00000394310 TTC21AQ8NDW8 1320 aa29.69■■■□□ 2.34
CACNB1-203ENST00000394310 LRRC7Q96NW7 1537 aa29.66■■■□□ 2.34
CACNB1-203ENST00000394310 NME9Q86XW9 330 aa29.64■■■□□ 2.34
CACNB1-203ENST00000394310 ATF3P18847 181 aa29.64■■■□□ 2.34
CACNB1-203ENST00000394310 CADPS2Q86UW7 1296 aa29.64■■■□□ 2.34
CACNB1-203ENST00000394310 C1orf167Q5SNV9 1468 aa29.63■■■□□ 2.33
CACNB1-203ENST00000394310 XIRP1Q702N8 1843 aaKnown RBP29.63■■■□□ 2.33
CACNB1-203ENST00000394310 TNNT2P45379 298 aaPredicted RBP29.62■■■□□ 2.33
CACNB1-203ENST00000394310 MTHFSP49914 203 aa29.62■■■□□ 2.33
CACNB1-203ENST00000394310 COG3Q96JB2 828 aa29.62■■■□□ 2.33
CACNB1-203ENST00000394310 MSH6P52701 1360 aa29.62■■■□□ 2.33
CACNB1-203ENST00000394310 AATKQ6ZMQ8 1374 aa29.62■■■□□ 2.33
CACNB1-203ENST00000394310 ESCO1Q5FWF5 840 aa29.62■■■□□ 2.33
CACNB1-203ENST00000394310 USP31Q70CQ4 1352 aa29.61■■■□□ 2.33
CACNB1-203ENST00000394310 MST1RQ04912 1400 aa29.6■■■□□ 2.33
CACNB1-203ENST00000394310 HNRNPUQ00839 825 aaKnown RBP eCLIP29.6■■■□□ 2.33
CACNB1-203ENST00000394310 OVOS2A0A0J9YW53 1432 aa29.59■■■□□ 2.33
CACNB1-203ENST00000394310 OVOS2Q6IE36 1432 aa29.59■■■□□ 2.33
CACNB1-203ENST00000394310 CFAP53Q96M91 514 aa29.57■■■□□ 2.32
CACNB1-203ENST00000394310 KIF1AQ12756 1690 aa29.56■■■□□ 2.32
CACNB1-203ENST00000394310 PNPLA6Q8IY17 1366 aa29.56■■■□□ 2.32
CACNB1-203ENST00000394310 ORAI2Q96SN7 254 aa29.56■■■□□ 2.32
CACNB1-203ENST00000394310 ZRANB1Q9UGI0 708 aa29.55■■■□□ 2.32
CACNB1-203ENST00000394310 WDR43Q15061 677 aaKnown RBP eCLIP29.54■■■□□ 2.32
CACNB1-203ENST00000394310 BLMP54132 1417 aaPredicted RBP29.54■■■□□ 2.32
CACNB1-203ENST00000394310 ADAMTS8Q9UP79 889 aa29.54■■■□□ 2.32
CACNB1-203ENST00000394310 SMG6Q86US8 1419 aaKnown RBP29.53■■■□□ 2.32
CACNB1-203ENST00000394310 USP54Q70EL1 1684 aa29.53■■■□□ 2.32
CACNB1-203ENST00000394310 POLKQ9UBT6 870 aa29.52■■■□□ 2.32
CACNB1-203ENST00000394310 ZBED9Q6R2W3 1325 aa29.52■■■□□ 2.32
CACNB1-203ENST00000394310 PSME1Q06323 249 aa29.52■■■□□ 2.32
CACNB1-203ENST00000394310 PIK3C2AO00443 1686 aa29.5■■■□□ 2.31
CACNB1-203ENST00000394310 MAP2P11137 1827 aaKnown RBP29.49■■■□□ 2.31
CACNB1-203ENST00000394310 SHPRHQ149N8 1683 aa29.48■■■□□ 2.31
CACNB1-203ENST00000394310 COL3A1P02461 1466 aaPredicted RBP29.48■■■□□ 2.31
CACNB1-203ENST00000394310 FOXO3O43524 673 aa29.47■■■□□ 2.31
CACNB1-203ENST00000394310 CDK12Q9NYV4 1490 aaPredicted RBP29.44■■■□□ 2.3
CACNB1-203ENST00000394310 ABTB2Q8N961 1025 aa29.44■■■□□ 2.3
CACNB1-203ENST00000394310 NLRP6P59044 892 aa29.43■■■□□ 2.3
CACNB1-203ENST00000394310 FBLN1P23142 703 aa29.41■■■□□ 2.3
CACNB1-203ENST00000394310 NUDCQ9Y266 331 aa29.41■■■□□ 2.3
CACNB1-203ENST00000394310 MARF1Q9Y4F3 1742 aaKnown RBP29.41■■■□□ 2.3
CACNB1-203ENST00000394310 PAK3O75914 559 aaPredicted RBP29.41■■■□□ 2.3
CACNB1-203ENST00000394310 KRT28Q7Z3Y7 464 aa29.41■■■□□ 2.3
CACNB1-203ENST00000394310 SLAIN2Q9P270 581 aa29.41■■■□□ 2.3
CACNB1-203ENST00000394310 TRPM3Q9HCF6 1732 aaPredicted RBP29.4■■■□□ 2.3
CACNB1-203ENST00000394310 LTBP4Q8N2S1 1624 aa29.4■■■□□ 2.3
CACNB1-203ENST00000394310 EMILIN1Q9Y6C2 1016 aa29.39■■■□□ 2.3
CACNB1-203ENST00000394310 NPHP3Q7Z494 1330 aa29.39■■■□□ 2.3
CACNB1-203ENST00000394310 DIAPH1O60610 1272 aaKnown RBP29.39■■■□□ 2.29
CACNB1-203ENST00000394310 KIF24Q5T7B8 1368 aa29.37■■■□□ 2.29
CACNB1-203ENST00000394310 SBNO1A3KN83 1393 aa29.36■■■□□ 2.29
CACNB1-203ENST00000394310 RRS1Q15050 365 aaKnown RBP29.36■■■□□ 2.29
CACNB1-203ENST00000394310 NGEFQ8N5V2 710 aa29.36■■■□□ 2.29
CACNB1-203ENST00000394310 BRINP3Q76B58 766 aa29.35■■■□□ 2.29
CACNB1-203ENST00000394310 PPM1GO15355 546 aaPredicted RBP29.33■■■□□ 2.29
CACNB1-203ENST00000394310 XPCQ01831 940 aaPredicted RBP29.32■■■□□ 2.28
CACNB1-203ENST00000394310 KCNH5Q8NCM2 988 aa29.31■■■□□ 2.28
CACNB1-203ENST00000394310 IL13P35225 146 aa29.31■■■□□ 2.28
CACNB1-203ENST00000394310 PXDNQ92626 1479 aa29.31■■■□□ 2.28
CACNB1-203ENST00000394310 ALS2Q96Q42 1657 aa29.31■■■□□ 2.28
CACNB1-203ENST00000394310 MAP3K19Q56UN5 1328 aa29.3■■■□□ 2.28
CACNB1-203ENST00000394310 U2AF1L5P0DN76 240 aaPredicted RBP29.3■■■□□ 2.28
CACNB1-203ENST00000394310 U2AF1Q01081 240 aaKnown RBP eCLIP29.3■■■□□ 2.28
CACNB1-203ENST00000394310 NCBP3Q53F19 620 aaKnown RBP29.3■■■□□ 2.28
CACNB1-203ENST00000394310 RUNDC1Q96C34 613 aa29.29■■■□□ 2.28
CACNB1-203ENST00000394310 USP19O94966 1318 aa29.29■■■□□ 2.28
CACNB1-203ENST00000394310 NUTM2GQ5VZR2 741 aa29.29■■■□□ 2.28
CACNB1-203ENST00000394310 DDX17Q92841 729 aaKnown RBP29.28■■■□□ 2.28
CACNB1-203ENST00000394310 SLIT3O75094 1523 aa29.28■■■□□ 2.28
CACNB1-203ENST00000394310 FLT4P35916 1363 aa29.27■■■□□ 2.28
CACNB1-203ENST00000394310 PDE3BQ13370 1112 aa29.27■■■□□ 2.28
CACNB1-203ENST00000394310 PNNQ9H307 717 aaKnown RBP29.27■■■□□ 2.28
CACNB1-203ENST00000394310 PEAK1Q9H792 1746 aa29.27■■■□□ 2.28
CACNB1-203ENST00000394310 NFAT5O94916 1531 aa29.27■■■□□ 2.28
CACNB1-203ENST00000394310 FCHSD2O94868 740 aa29.26■■■□□ 2.27
CACNB1-203ENST00000394310 SOS2Q07890 1332 aaPredicted RBP29.25■■■□□ 2.27
CACNB1-203ENST00000394310 U2SURPO15042 1029 aaKnown RBP29.24■■■□□ 2.27
CACNB1-203ENST00000394310 CCDC146Q8IYE0 955 aa29.24■■■□□ 2.27
CACNB1-203ENST00000394310 TNS3Q68CZ2 1445 aa29.24■■■□□ 2.27
CACNB1-203ENST00000394310 PLEKHF1Q96S99 279 aa29.24■■■□□ 2.27
CACNB1-203ENST00000394310 RTL1A6NKG5 1358 aa29.23■■■□□ 2.27
CACNB1-203ENST00000394310 SPATA31A3Q5VYP0 1347 aa29.23■■■□□ 2.27
CACNB1-203ENST00000394310 APAF1O14727 1248 aa29.23■■■□□ 2.27
CACNB1-203ENST00000394310 PHRF1Q9P1Y6 1649 aaKnown RBP29.22■■■□□ 2.27
CACNB1-203ENST00000394310 GCP02774 474 aa29.21■■■□□ 2.27
CACNB1-203ENST00000394310 HSP90AB2PQ58FF8 381 aa29.21■■■□□ 2.27
CACNB1-203ENST00000394310 ZNF521Q96K83 1311 aa29.21■■■□□ 2.27
CACNB1-203ENST00000394310 ARHGEF10O15013 1369 aa29.21■■■□□ 2.27
CACNB1-203ENST00000394310 SOX12O15370 315 aa29.21■■■□□ 2.27
CACNB1-203ENST00000394310 AMPHP49418 695 aa29.21■■■□□ 2.27
CACNB1-203ENST00000394310 EIF4A2Q14240 407 aaKnown RBP29.21■■■□□ 2.27
CACNB1-203ENST00000394310 IQSEC2Q5JU85 1478 aa29.2■■■□□ 2.26
CACNB1-203ENST00000394310 LMOD2Q6P5Q4 547 aa29.19■■■□□ 2.26
CACNB1-203ENST00000394310 HOXC9P31274 260 aa29.18■■■□□ 2.26
CACNB1-203ENST00000394310 RSPH6AQ9H0K4 717 aa29.18■■■□□ 2.26
CACNB1-203ENST00000394310 NHSL1Q5SYE7 1610 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms