RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.38
CLDND1-204ENST00000394185 SPINK5Q9NQ38 1064 aaPredicted RBP23.68■■□□□ 1.38
CLDND1-204ENST00000394185 DMRT2Q9Y5R5 561 aa23.68■■□□□ 1.38
CLDND1-204ENST00000394185 ITSN1Q15811 1721 aa23.68■■□□□ 1.38
CLDND1-204ENST00000394185 RRP7AQ9Y3A4 280 aaKnown RBP23.68■■□□□ 1.38
CLDND1-204ENST00000394185 PIK3R4Q99570 1358 aa23.67■■□□□ 1.38
CLDND1-204ENST00000394185 POLKQ9UBT6 870 aa23.67■■□□□ 1.38
CLDND1-204ENST00000394185 PLEKHG3A1L390 1219 aa23.66■■□□□ 1.38
CLDND1-204ENST00000394185 PPM1GO15355 546 aaPredicted RBP23.66■■□□□ 1.38
CLDND1-204ENST00000394185 GOLGA2Q08379 1002 aa23.66■■□□□ 1.38
CLDND1-204ENST00000394185 DUSP27Q5VZP5 1158 aa23.66■■□□□ 1.38
CLDND1-204ENST00000394185 PMFBP1Q8TBY8 1022 aa23.66■■□□□ 1.38
CLDND1-204ENST00000394185 RUNDC1Q96C34 613 aa23.66■■□□□ 1.38
CLDND1-204ENST00000394185 NEUROD2Q15784 382 aa23.65■■□□□ 1.38
CLDND1-204ENST00000394185 ZNF692Q9BU19 519 aaPredicted RBP23.65■■□□□ 1.38
CLDND1-204ENST00000394185 U2SURPO15042 1029 aaKnown RBP23.65■■□□□ 1.38
CLDND1-204ENST00000394185 TCP11L2Q8N4U5 519 aa23.64■■□□□ 1.38
CLDND1-204ENST00000394185 PNPLA6Q8IY17 1366 aa23.64■■□□□ 1.37
CLDND1-204ENST00000394185 IQSEC2Q5JU85 1478 aa23.64■■□□□ 1.37
CLDND1-204ENST00000394185 EMILIN1Q9Y6C2 1016 aa23.64■■□□□ 1.37
CLDND1-204ENST00000394185 RGPD8O14715 1765 aaPredicted RBP23.63■■□□□ 1.37
CLDND1-204ENST00000394185 NRKQ7Z2Y5 1582 aa23.62■■□□□ 1.37
CLDND1-204ENST00000394185 CHD2O14647 1828 aaKnown RBP23.62■■□□□ 1.37
CLDND1-204ENST00000394185 RRP1P56182 461 aaKnown RBP23.62■■□□□ 1.37
CLDND1-204ENST00000394185 SLFN5Q08AF3 891 aa23.62■■□□□ 1.37
CLDND1-204ENST00000394185 TTC21BQ7Z4L5 1316 aa23.62■■□□□ 1.37
CLDND1-204ENST00000394185 NPHP4O75161 1426 aaPredicted RBP23.61■■□□□ 1.37
CLDND1-204ENST00000394185 USP6P35125 1406 aa23.61■■□□□ 1.37
CLDND1-204ENST00000394185 COG3Q96JB2 828 aa23.61■■□□□ 1.37
CLDND1-204ENST00000394185 ERICH6BQ5W0A0 696 aa23.61■■□□□ 1.37
CLDND1-204ENST00000394185 WWC1Q8IX03 1113 aa23.61■■□□□ 1.37
CLDND1-204ENST00000394185 RRS1Q15050 365 aaKnown RBP23.6■■□□□ 1.37
CLDND1-204ENST00000394185 DIAPH1O60610 1272 aaKnown RBP23.59■■□□□ 1.37
CLDND1-204ENST00000394185 MAP2P11137 1827 aaKnown RBP23.59■■□□□ 1.37
CLDND1-204ENST00000394185 PPP4R2Q9NY27 417 aa23.58■■□□□ 1.37
CLDND1-204ENST00000394185 TRMT2AQ8IZ69 625 aaKnown RBP23.58■■□□□ 1.36
CLDND1-204ENST00000394185 PLEKHF1Q96S99 279 aa23.57■■□□□ 1.36
CLDND1-204ENST00000394185 B4GALNT3Q6L9W6 998 aa23.57■■□□□ 1.36
CLDND1-204ENST00000394185 NALCNQ8IZF0 1738 aa23.56■■□□□ 1.36
CLDND1-204ENST00000394185 SSH2Q76I76 1423 aa23.56■■□□□ 1.36
CLDND1-204ENST00000394185 PLIN1O60240 522 aa23.56■■□□□ 1.36
CLDND1-204ENST00000394185 NGDNQ8NEJ9 315 aaKnown RBP23.55■■□□□ 1.36
CLDND1-204ENST00000394185 AATKQ6ZMQ8 1374 aa23.55■■□□□ 1.36
CLDND1-204ENST00000394185 PHF23Q9BUL5 403 aaPredicted RBP23.54■■□□□ 1.36
CLDND1-204ENST00000394185 NGEFQ8N5V2 710 aa23.54■■□□□ 1.36
CLDND1-204ENST00000394185 OVOS2A0A0J9YW53 1432 aa23.53■■□□□ 1.36
CLDND1-204ENST00000394185 OVOS2Q6IE36 1432 aa23.53■■□□□ 1.36
CLDND1-204ENST00000394185 FMN2Q9NZ56 1722 aa23.53■■□□□ 1.36
CLDND1-204ENST00000394185 E9PSI1 815 aa23.52■■□□□ 1.36
CLDND1-204ENST00000394185 ANKARQ7Z5J8 1434 aa23.51■■□□□ 1.35
CLDND1-204ENST00000394185 SOX12O15370 315 aa23.51■■□□□ 1.35
CLDND1-204ENST00000394185 CDK12Q9NYV4 1490 aaPredicted RBP23.5■■□□□ 1.35
CLDND1-204ENST00000394185 IL13P35225 146 aa23.49■■□□□ 1.35
CLDND1-204ENST00000394185 LRRC7Q96NW7 1537 aa23.48■■□□□ 1.35
CLDND1-204ENST00000394185 HMOX1P09601 288 aa23.48■■□□□ 1.35
CLDND1-204ENST00000394185 TMPOP42166 694 aaKnown RBP23.47■■□□□ 1.35
CLDND1-204ENST00000394185 CCDC27Q2M243 656 aa23.47■■□□□ 1.35
CLDND1-204ENST00000394185 PELP1Q8IZL8 1130 aaKnown RBP23.47■■□□□ 1.35
CLDND1-204ENST00000394185 EXOC6Q8TAG9 804 aa23.47■■□□□ 1.35
CLDND1-204ENST00000394185 RSPH6AQ9H0K4 717 aa23.47■■□□□ 1.35
CLDND1-204ENST00000394185 ADGRL3Q9HAR2 1447 aa23.47■■□□□ 1.35
CLDND1-204ENST00000394185 MAPK8IP3Q9UPT6 1336 aa23.46■■□□□ 1.35
CLDND1-204ENST00000394185 PRKAR2BP31323 418 aa23.45■■□□□ 1.35
CLDND1-204ENST00000394185 TTC21AQ8NDW8 1320 aa23.45■■□□□ 1.34
CLDND1-204ENST00000394185 HSPA2P54652 639 aa23.45■■□□□ 1.34
CLDND1-204ENST00000394185 C20orf194Q5TEA3 1177 aa23.45■■□□□ 1.34
CLDND1-204ENST00000394185 USP31Q70CQ4 1352 aa23.44■■□□□ 1.34
CLDND1-204ENST00000394185 C14orf37Q86TY3 774 aa23.44■■□□□ 1.34
CLDND1-204ENST00000394185 TRIM35Q9UPQ4 493 aa23.44■■□□□ 1.34
CLDND1-204ENST00000394185 PIK3C2AO00443 1686 aa23.44■■□□□ 1.34
CLDND1-204ENST00000394185 FCHSD2O94868 740 aa23.44■■□□□ 1.34
CLDND1-204ENST00000394185 NUTM2GQ5VZR2 741 aa23.44■■□□□ 1.34
CLDND1-204ENST00000394185 WDR63Q8IWG1 891 aa23.44■■□□□ 1.34
CLDND1-204ENST00000394185 PHACTR3Q96KR7 559 aa23.42■■□□□ 1.34
CLDND1-204ENST00000394185 PEAK1Q9H792 1746 aa23.42■■□□□ 1.34
CLDND1-204ENST00000394185 PHF8Q9UPP1 1060 aa23.42■■□□□ 1.34
CLDND1-204ENST00000394185 NWD1Q149M9 1564 aa23.41■■□□□ 1.34
CLDND1-204ENST00000394185 BCAR3O75815 825 aa23.41■■□□□ 1.34
CLDND1-204ENST00000394185 RIPK4P57078 832 aa23.4■■□□□ 1.34
CLDND1-204ENST00000394185 HSP90AB2PQ58FF8 381 aa23.4■■□□□ 1.34
CLDND1-204ENST00000394185 ESCO1Q5FWF5 840 aa23.4■■□□□ 1.34
CLDND1-204ENST00000394185 KDM4FA0A1W2PPD8 638 aa23.39■■□□□ 1.33
CLDND1-204ENST00000394185 PAK3O75914 559 aaPredicted RBP23.39■■□□□ 1.33
CLDND1-204ENST00000394185 EIF4A2Q14240 407 aaKnown RBP23.39■■□□□ 1.33
CLDND1-204ENST00000394185 NCBP3Q53F19 620 aaKnown RBP23.39■■□□□ 1.33
CLDND1-204ENST00000394185 NLRP6P59044 892 aa23.38■■□□□ 1.33
CLDND1-204ENST00000394185 MAP3K19Q56UN5 1328 aa23.38■■□□□ 1.33
CLDND1-204ENST00000394185 PROSER2Q86WR7 435 aaPredicted RBP23.38■■□□□ 1.33
CLDND1-204ENST00000394185 CCDC136Q96JN2 1154 aa23.38■■□□□ 1.33
CLDND1-204ENST00000394185 CRBNQ96SW2 442 aa23.37■■□□□ 1.33
CLDND1-204ENST00000394185 TSHZ2Q9NRE2 1034 aa23.37■■□□□ 1.33
CLDND1-204ENST00000394185 TSR2Q969E8 191 aaKnown RBP23.37■■□□□ 1.33
CLDND1-204ENST00000394185 ORAI2Q96SN7 254 aa23.37■■□□□ 1.33
CLDND1-204ENST00000394185 AEBP1Q8IUX7 1158 aa23.36■■□□□ 1.33
CLDND1-204ENST00000394185 PNNQ9H307 717 aaKnown RBP23.36■■□□□ 1.33
CLDND1-204ENST00000394185 ABTB2Q8N961 1025 aa23.35■■□□□ 1.33
CLDND1-204ENST00000394185 MARF1Q9Y4F3 1742 aaKnown RBP23.35■■□□□ 1.33
CLDND1-204ENST00000394185 FANCIQ9NVI1 1328 aa23.33■■□□□ 1.32
CLDND1-204ENST00000394185 MYH16Q9H6N6 1097 aa23.32■■□□□ 1.32
CLDND1-204ENST00000394185 STRCP1A6NGW2 1772 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms