RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 LMOD2Q6P5Q4 547 aa4.79□□□□□ -1.64
ATP2B1-203ENST00000393164 TTC21BQ7Z4L5 1316 aa4.79□□□□□ -1.64
ATP2B1-203ENST00000393164 MORC1Q86VD1 984 aa4.79□□□□□ -1.64
ATP2B1-203ENST00000393164 ABTB2Q8N961 1025 aa4.79□□□□□ -1.64
ATP2B1-203ENST00000393164 SBNO1A3KN83 1393 aa4.78□□□□□ -1.64
ATP2B1-203ENST00000393164 PIP4K2BP78356 416 aa4.78□□□□□ -1.64
ATP2B1-203ENST00000393164 CC2D1BQ5T0F9 858 aaKnown RBP4.78□□□□□ -1.64
ATP2B1-203ENST00000393164 LRRC59Q96AG4 307 aaKnown RBP4.78□□□□□ -1.64
ATP2B1-203ENST00000393164 TOPAZ1Q8N9V7 1692 aa4.78□□□□□ -1.64
ATP2B1-203ENST00000393164 HAP1P54257 671 aaPredicted RBP4.78□□□□□ -1.64
ATP2B1-203ENST00000393164 KCNH5Q8NCM2 988 aa4.78□□□□□ -1.64
ATP2B1-203ENST00000393164 CARD14Q9BXL6 1004 aa4.78□□□□□ -1.64
ATP2B1-203ENST00000393164 USP32Q8NFA0 1604 aa4.78□□□□□ -1.64
ATP2B1-203ENST00000393164 NLRP6P59044 892 aa4.77□□□□□ -1.65
ATP2B1-203ENST00000393164 AMER1Q5JTC6 1135 aaPredicted RBP4.77□□□□□ -1.65
ATP2B1-203ENST00000393164 MYOM1P52179 1685 aa4.77□□□□□ -1.65
ATP2B1-203ENST00000393164 CD163L1Q9NR16 1453 aa4.77□□□□□ -1.65
ATP2B1-203ENST00000393164 XIRP1Q702N8 1843 aaKnown RBP4.77□□□□□ -1.65
ATP2B1-203ENST00000393164 SOS2Q07890 1332 aaPredicted RBP4.77□□□□□ -1.65
ATP2B1-203ENST00000393164 FYB1O15117 783 aa4.77□□□□□ -1.65
ATP2B1-203ENST00000393164 CFAP53Q96M91 514 aa4.77□□□□□ -1.65
ATP2B1-203ENST00000393164 PRKRIP1Q9H875 184 aaPredicted RBP4.77□□□□□ -1.65
ATP2B1-203ENST00000393164 CNGB1Q14028 1251 aaPredicted RBP4.77□□□□□ -1.65
ATP2B1-203ENST00000393164 GGNBP2Q9H3C7 697 aa4.77□□□□□ -1.65
ATP2B1-203ENST00000393164 TNS3Q68CZ2 1445 aa4.76□□□□□ -1.65
ATP2B1-203ENST00000393164 USP31Q70CQ4 1352 aa4.76□□□□□ -1.65
ATP2B1-203ENST00000393164 SPATA31A3Q5VYP0 1347 aa4.76□□□□□ -1.65
ATP2B1-203ENST00000393164 MYBBP1AQ9BQG0 1328 aaKnown RBP4.76□□□□□ -1.65
ATP2B1-203ENST00000393164 XPCQ01831 940 aaPredicted RBP4.76□□□□□ -1.65
ATP2B1-203ENST00000393164 NME9Q86XW9 330 aa4.76□□□□□ -1.65
ATP2B1-203ENST00000393164 SSH2Q76I76 1423 aa4.76□□□□□ -1.65
ATP2B1-203ENST00000393164 AKAP12Q02952 1782 aa4.76□□□□□ -1.65
ATP2B1-203ENST00000393164 MON2Q7Z3U7 1717 aa4.76□□□□□ -1.65
ATP2B1-203ENST00000393164 CCER2I3L3R5 266 aa4.75□□□□□ -1.65
ATP2B1-203ENST00000393164 PARD3Q8TEW0 1356 aa4.75□□□□□ -1.65
ATP2B1-203ENST00000393164 AATKQ6ZMQ8 1374 aa4.75□□□□□ -1.65
ATP2B1-203ENST00000393164 RGPD8O14715 1765 aaPredicted RBP4.75□□□□□ -1.65
ATP2B1-203ENST00000393164 AHDC1Q5TGY3 1603 aaPredicted RBP4.75□□□□□ -1.65
ATP2B1-203ENST00000393164 PXDNQ92626 1479 aa4.75□□□□□ -1.65
ATP2B1-203ENST00000393164 ROBO1Q9Y6N7 1651 aa4.75□□□□□ -1.65
ATP2B1-203ENST00000393164 TNNT2P45379 298 aaPredicted RBP4.75□□□□□ -1.65
ATP2B1-203ENST00000393164 NUDCQ9Y266 331 aa4.75□□□□□ -1.65
ATP2B1-203ENST00000393164 KIF24Q5T7B8 1368 aa4.74□□□□□ -1.65
ATP2B1-203ENST00000393164 OVOS2A0A0J9YW53 1432 aa4.74□□□□□ -1.65
ATP2B1-203ENST00000393164 OVOS2Q6IE36 1432 aa4.74□□□□□ -1.65
ATP2B1-203ENST00000393164 AMPHP49418 695 aa4.74□□□□□ -1.65
ATP2B1-203ENST00000393164 NUTM2GQ5VZR2 741 aa4.74□□□□□ -1.65
ATP2B1-203ENST00000393164 GCP02774 474 aa4.74□□□□□ -1.65
ATP2B1-203ENST00000393164 PPP2R1AP30153 589 aa4.74□□□□□ -1.65
ATP2B1-203ENST00000393164 DDX17Q92841 729 aaKnown RBP4.74□□□□□ -1.65
ATP2B1-203ENST00000393164 MRS2Q9HD23 443 aa4.74□□□□□ -1.65
ATP2B1-203ENST00000393164 JCADQ9P266 1359 aa4.74□□□□□ -1.65
ATP2B1-203ENST00000393164 USP19O94966 1318 aa4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 NHSL1Q5SYE7 1610 aa4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 NRKQ7Z2Y5 1582 aa4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 PPM1GO15355 546 aaPredicted RBP4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 SOX12O15370 315 aa4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 KIF20BQ96Q89 1820 aa4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 RTL1A6NKG5 1358 aa4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 NEFMP07197 916 aa4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 MTHFSP49914 203 aa4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 WDR43Q15061 677 aaKnown RBP eCLIP4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 PNNQ9H307 717 aaKnown RBP4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 SMG6Q86US8 1419 aaKnown RBP4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 SPATA31A6Q5VVP1 1343 aa4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 FLT4P35916 1363 aa4.73□□□□□ -1.65
ATP2B1-203ENST00000393164 MIER1Q8N108 512 aa4.72□□□□□ -1.65
ATP2B1-203ENST00000393164 PRDM11Q9NQV5 511 aa4.72□□□□□ -1.65
ATP2B1-203ENST00000393164 ZBTB7CA1YPR0 619 aa4.72□□□□□ -1.65
ATP2B1-203ENST00000393164 PLEKHG5O94827 1062 aa4.72□□□□□ -1.65
ATP2B1-203ENST00000393164 ZRANB1Q9UGI0 708 aa4.72□□□□□ -1.65
ATP2B1-203ENST00000393164 PHLPP1O60346 1717 aa4.72□□□□□ -1.65
ATP2B1-203ENST00000393164 PNPLA6Q8IY17 1366 aa4.72□□□□□ -1.65
ATP2B1-203ENST00000393164 DIAPH1O60610 1272 aaKnown RBP4.72□□□□□ -1.65
ATP2B1-203ENST00000393164 MED1Q15648 1581 aaPredicted RBP4.72□□□□□ -1.65
ATP2B1-203ENST00000393164 TRPM3Q9HCF6 1732 aaPredicted RBP4.72□□□□□ -1.65
ATP2B1-203ENST00000393164 POLKQ9UBT6 870 aa4.72□□□□□ -1.65
ATP2B1-203ENST00000393164 ANKRD26Q9UPS8 1709 aa4.72□□□□□ -1.65
ATP2B1-203ENST00000393164 PIK3C2AO00443 1686 aa4.71□□□□□ -1.65
ATP2B1-203ENST00000393164 CPDO75976 1380 aa4.71□□□□□ -1.65
ATP2B1-203ENST00000393164 HSPA1LP34931 641 aa4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 ZC3H6P61129 1189 aaKnown RBP4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 RRS1Q15050 365 aaKnown RBP4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 ARHGEF25Q86VW2 580 aa4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 IP6K1Q92551 441 aa4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 CDK12Q9NYV4 1490 aaPredicted RBP4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 MAP3K19Q56UN5 1328 aa4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 SLIT3O75094 1523 aa4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 BLMP54132 1417 aaPredicted RBP4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 MEX3CQ5U5Q3 659 aaKnown RBP4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 EMILIN1Q9Y6C2 1016 aa4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 USP54Q70EL1 1684 aa4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 ALS2Q96Q42 1657 aa4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 INSRP06213 1382 aa4.71□□□□□ -1.66
ATP2B1-203ENST00000393164 CSB-PGBD3P0DP91 1061 aa4.7□□□□□ -1.66
ATP2B1-203ENST00000393164 CABLES1Q8TDN4 633 aa4.7□□□□□ -1.66
ATP2B1-203ENST00000393164 COL16A1Q07092 1604 aaPredicted RBP4.7□□□□□ -1.66
ATP2B1-203ENST00000393164 ABCC6O95255 1503 aa4.7□□□□□ -1.66
ATP2B1-203ENST00000393164 NUTM2BA6NNL0 878 aaPredicted RBP4.7□□□□□ -1.66
ATP2B1-203ENST00000393164 NUTM2EB1AL46 878 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms