RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PHLPP1O60346 1717 aa9.42□□□□□ -0.9
UBBP1-201ENST00000392399 SBNO1A3KN83 1393 aa9.42□□□□□ -0.9
UBBP1-201ENST00000392399 SPATA31A6Q5VVP1 1343 aa9.42□□□□□ -0.9
UBBP1-201ENST00000392399 SPATA31A3Q5VYP0 1347 aa9.42□□□□□ -0.9
UBBP1-201ENST00000392399 ZBTB22O15209 634 aa9.42□□□□□ -0.9
UBBP1-201ENST00000392399 ITSN1Q15811 1721 aa9.42□□□□□ -0.9
UBBP1-201ENST00000392399 PXDNQ92626 1479 aa9.41□□□□□ -0.9
UBBP1-201ENST00000392399 POLA2Q14181 598 aa9.41□□□□□ -0.9
UBBP1-201ENST00000392399 HDGFL2Q7Z4V5 671 aaPredicted RBP9.41□□□□□ -0.9
UBBP1-201ENST00000392399 TMC1Q8TDI8 760 aa9.41□□□□□ -0.9
UBBP1-201ENST00000392399 TERF2IPQ9NYB0 399 aa9.41□□□□□ -0.9
UBBP1-201ENST00000392399 RGPD8O14715 1765 aaPredicted RBP9.41□□□□□ -0.9
UBBP1-201ENST00000392399 COL16A1Q07092 1604 aaPredicted RBP9.41□□□□□ -0.9
UBBP1-201ENST00000392399 ARHGEF10O15013 1369 aa9.4□□□□□ -0.9
UBBP1-201ENST00000392399 DISP3Q9P2K9 1392 aa9.4□□□□□ -0.9
UBBP1-201ENST00000392399 XPCQ01831 940 aaPredicted RBP9.4□□□□□ -0.9
UBBP1-201ENST00000392399 SLC12A5Q9H2X9 1139 aa9.4□□□□□ -0.9
UBBP1-201ENST00000392399 PAK3O75914 559 aaPredicted RBP9.39□□□□□ -0.91
UBBP1-201ENST00000392399 CPSF1Q10570 1443 aaKnown RBP9.39□□□□□ -0.91
UBBP1-201ENST00000392399 TNS3Q68CZ2 1445 aa9.39□□□□□ -0.91
UBBP1-201ENST00000392399 TOPAZ1Q8N9V7 1692 aa9.39□□□□□ -0.91
UBBP1-201ENST00000392399 PNPLA6Q8IY17 1366 aa9.38□□□□□ -0.91
UBBP1-201ENST00000392399 ATF5Q9Y2D1 282 aaPredicted RBP9.38□□□□□ -0.91
UBBP1-201ENST00000392399 USP6P35125 1406 aa9.38□□□□□ -0.91
UBBP1-201ENST00000392399 KTN1Q86UP2 1357 aaKnown RBP9.37□□□□□ -0.91
UBBP1-201ENST00000392399 TTC21AQ8NDW8 1320 aa9.37□□□□□ -0.91
UBBP1-201ENST00000392399 LMOD2Q6P5Q4 547 aa9.37□□□□□ -0.91
UBBP1-201ENST00000392399 NLRP13Q86W25 1043 aa9.37□□□□□ -0.91
UBBP1-201ENST00000392399 ABTB2Q8N961 1025 aa9.37□□□□□ -0.91
UBBP1-201ENST00000392399 TTC21BQ7Z4L5 1316 aa9.36□□□□□ -0.91
UBBP1-201ENST00000392399 SHPRHQ149N8 1683 aa9.36□□□□□ -0.91
UBBP1-201ENST00000392399 SSH2Q76I76 1423 aa9.36□□□□□ -0.91
UBBP1-201ENST00000392399 ANKRD36BQ8N2N9 1353 aa9.36□□□□□ -0.91
UBBP1-201ENST00000392399 C11orf95C9JLR9 678 aaPredicted RBP9.35□□□□□ -0.91
UBBP1-201ENST00000392399 EDC4Q6P2E9 1401 aaKnown RBP9.35□□□□□ -0.91
UBBP1-201ENST00000392399 CD163L1Q9NR16 1453 aa9.34□□□□□ -0.91
UBBP1-201ENST00000392399 NUTM2BA6NNL0 878 aaPredicted RBP9.34□□□□□ -0.91
UBBP1-201ENST00000392399 NUTM2EB1AL46 878 aaPredicted RBP9.34□□□□□ -0.91
UBBP1-201ENST00000392399 HAP1P54257 671 aaPredicted RBP9.34□□□□□ -0.91
UBBP1-201ENST00000392399 NLRP6P59044 892 aa9.34□□□□□ -0.91
UBBP1-201ENST00000392399 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
UBBP1-201ENST00000392399 POLR3GLQ9BT43 218 aa9.34□□□□□ -0.91
UBBP1-201ENST00000392399 A0A1W2PP64 1363 aa9.34□□□□□ -0.91
UBBP1-201ENST00000392399 COL22A1Q8NFW1 1626 aaPredicted RBP9.34□□□□□ -0.91
UBBP1-201ENST00000392399 TRPM3Q9HCF6 1732 aaPredicted RBP9.34□□□□□ -0.92
UBBP1-201ENST00000392399 MEX3CQ5U5Q3 659 aaKnown RBP9.33□□□□□ -0.92
UBBP1-201ENST00000392399 KCNH5Q8NCM2 988 aa9.33□□□□□ -0.92
UBBP1-201ENST00000392399 KIF7Q2M1P5 1343 aa9.32□□□□□ -0.92
UBBP1-201ENST00000392399 GCP02774 474 aa9.32□□□□□ -0.92
UBBP1-201ENST00000392399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.32□□□□□ -0.92
UBBP1-201ENST00000392399 CABLES1Q8TDN4 633 aa9.32□□□□□ -0.92
UBBP1-201ENST00000392399 USP31Q70CQ4 1352 aa9.32□□□□□ -0.92
UBBP1-201ENST00000392399 ALS2Q96Q42 1657 aa9.32□□□□□ -0.92
UBBP1-201ENST00000392399 AKAP12Q02952 1782 aa9.32□□□□□ -0.92
UBBP1-201ENST00000392399 USP19O94966 1318 aa9.31□□□□□ -0.92
UBBP1-201ENST00000392399 ADAMTS2O95450 1211 aa9.31□□□□□ -0.92
UBBP1-201ENST00000392399 ATXN8OSP0DMR3 200 aa9.31□□□□□ -0.92
UBBP1-201ENST00000392399 NUTM2GQ5VZR2 741 aa9.31□□□□□ -0.92
UBBP1-201ENST00000392399 FNBP4Q8N3X1 1017 aaPredicted RBP9.31□□□□□ -0.92
UBBP1-201ENST00000392399 NGLY1Q96IV0 654 aa9.31□□□□□ -0.92
UBBP1-201ENST00000392399 RBM42Q9BTD8 480 aaKnown RBP9.31□□□□□ -0.92
UBBP1-201ENST00000392399 CARD14Q9BXL6 1004 aa9.31□□□□□ -0.92
UBBP1-201ENST00000392399 PANK3Q9H999 370 aa9.31□□□□□ -0.92
UBBP1-201ENST00000392399 CCDC7Q96M83 1385 aa9.31□□□□□ -0.92
UBBP1-201ENST00000392399 WASHC2AQ641Q2 1341 aa9.31□□□□□ -0.92
UBBP1-201ENST00000392399 MED1Q15648 1581 aaPredicted RBP9.3□□□□□ -0.92
UBBP1-201ENST00000392399 FYB1O15117 783 aa9.3□□□□□ -0.92
UBBP1-201ENST00000392399 ZNF772Q68DY9 489 aaPredicted RBP9.3□□□□□ -0.92
UBBP1-201ENST00000392399 COG3Q96JB2 828 aa9.3□□□□□ -0.92
UBBP1-201ENST00000392399 MON2Q7Z3U7 1717 aa9.3□□□□□ -0.92
UBBP1-201ENST00000392399 LRP6O75581 1613 aa9.3□□□□□ -0.92
UBBP1-201ENST00000392399 CGNL1Q0VF96 1302 aa9.3□□□□□ -0.92
UBBP1-201ENST00000392399 NME9Q86XW9 330 aa9.29□□□□□ -0.92
UBBP1-201ENST00000392399 C8orf37Q96NL8 207 aa9.29□□□□□ -0.92
UBBP1-201ENST00000392399 KNSTRNQ9Y448 316 aa9.29□□□□□ -0.92
UBBP1-201ENST00000392399 CPDO75976 1380 aa9.28□□□□□ -0.92
UBBP1-201ENST00000392399 FAM83GA6ND36 823 aa9.28□□□□□ -0.92
UBBP1-201ENST00000392399 PLEKHG5O94827 1062 aa9.28□□□□□ -0.92
UBBP1-201ENST00000392399 PRDM11Q9NQV5 511 aa9.28□□□□□ -0.92
UBBP1-201ENST00000392399 NSD3Q9BZ95 1437 aa9.28□□□□□ -0.92
UBBP1-201ENST00000392399 NRKQ7Z2Y5 1582 aa9.28□□□□□ -0.92
UBBP1-201ENST00000392399 AFF2P51816 1311 aa9.28□□□□□ -0.92
UBBP1-201ENST00000392399 ZC3H6P61129 1189 aaKnown RBP9.27□□□□□ -0.93
UBBP1-201ENST00000392399 MYOM1P52179 1685 aa9.26□□□□□ -0.93
UBBP1-201ENST00000392399 SLIT3O75094 1523 aa9.26□□□□□ -0.93
UBBP1-201ENST00000392399 KIAA0232Q92628 1395 aa9.26□□□□□ -0.93
UBBP1-201ENST00000392399 OVOS2A0A0J9YW53 1432 aa9.26□□□□□ -0.93
UBBP1-201ENST00000392399 OVOS2Q6IE36 1432 aa9.26□□□□□ -0.93
UBBP1-201ENST00000392399 PER1O15534 1290 aaPredicted RBP9.26□□□□□ -0.93
UBBP1-201ENST00000392399 ARHGEF25Q86VW2 580 aa9.26□□□□□ -0.93
UBBP1-201ENST00000392399 UNC5CLQ8IV45 518 aa9.26□□□□□ -0.93
UBBP1-201ENST00000392399 GGNBP2Q9H3C7 697 aa9.26□□□□□ -0.93
UBBP1-201ENST00000392399 RGS17Q9UGC6 210 aaPredicted RBP9.26□□□□□ -0.93
UBBP1-201ENST00000392399 ZRANB1Q9UGI0 708 aa9.26□□□□□ -0.93
UBBP1-201ENST00000392399 USP21Q9UK80 565 aa9.26□□□□□ -0.93
UBBP1-201ENST00000392399 PIK3C2AO00443 1686 aa9.26□□□□□ -0.93
UBBP1-201ENST00000392399 NSD2O96028 1365 aa9.25□□□□□ -0.93
UBBP1-201ENST00000392399 AATKQ6ZMQ8 1374 aa9.25□□□□□ -0.93
UBBP1-201ENST00000392399 QTRT2Q9H974 415 aaKnown RBP9.25□□□□□ -0.93
UBBP1-201ENST00000392399 BTG4Q9NY30 223 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms