RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
CCDC57-203ENST00000392343 EVC2Q86UK5 1308 aa17.53■□□□□ 0.4
CCDC57-203ENST00000392343 ELL2O00472 640 aaPredicted RBP17.52■□□□□ 0.4
CCDC57-203ENST00000392343 NUCB1Q02818 461 aa17.52■□□□□ 0.4
CCDC57-203ENST00000392343 CHD1LQ86WJ1 897 aa17.52■□□□□ 0.39
CCDC57-203ENST00000392343 ADGRL1O94910 1474 aa17.51■□□□□ 0.39
CCDC57-203ENST00000392343 MROH1Q8NDA8 1641 aa17.51■□□□□ 0.39
CCDC57-203ENST00000392343 MYO3AQ8NEV4 1616 aa17.51■□□□□ 0.39
CCDC57-203ENST00000392343 NRXN1Q9ULB1 1477 aa17.5■□□□□ 0.39
CCDC57-203ENST00000392343 DDIT3P35638 169 aa17.5■□□□□ 0.39
CCDC57-203ENST00000392343 RBM25P49756 843 aaKnown RBP17.5■□□□□ 0.39
CCDC57-203ENST00000392343 THUMPD2Q9BTF0 503 aaKnown RBP17.5■□□□□ 0.39
CCDC57-203ENST00000392343 IFT172Q9UG01 1749 aa17.5■□□□□ 0.39
CCDC57-203ENST00000392343 ANKRD36BQ8N2N9 1353 aa17.49■□□□□ 0.39
CCDC57-203ENST00000392343 PPRC1Q5VV67 1664 aaKnown RBP17.49■□□□□ 0.39
CCDC57-203ENST00000392343 ESPNB1AK53 854 aa17.49■□□□□ 0.39
CCDC57-203ENST00000392343 CT47B1P0C2W7 299 aaPredicted RBP17.49■□□□□ 0.39
CCDC57-203ENST00000392343 KIF2CQ99661 725 aa17.49■□□□□ 0.39
CCDC57-203ENST00000392343 EFCAB6Q5THR3 1501 aa17.49■□□□□ 0.39
CCDC57-203ENST00000392343 TRIM44Q96DX7 344 aaPredicted RBP17.48■□□□□ 0.39
CCDC57-203ENST00000392343 IPO8O15397 1037 aaKnown RBP17.48■□□□□ 0.39
CCDC57-203ENST00000392343 A0A1W2PP64 1363 aa17.47■□□□□ 0.39
CCDC57-203ENST00000392343 INO80Q9ULG1 1556 aaPredicted RBP17.47■□□□□ 0.39
CCDC57-203ENST00000392343 MINK1Q8N4C8 1332 aaPredicted RBP17.47■□□□□ 0.39
CCDC57-203ENST00000392343 ADGRB1O14514 1584 aa17.47■□□□□ 0.39
CCDC57-203ENST00000392343 FYB1O15117 783 aa17.46■□□□□ 0.39
CCDC57-203ENST00000392343 SSFA2P28290 1259 aa17.46■□□□□ 0.39
CCDC57-203ENST00000392343 SNX21Q969T3 373 aa17.46■□□□□ 0.39
CCDC57-203ENST00000392343 GBP4Q96PP9 640 aa17.46■□□□□ 0.39
CCDC57-203ENST00000392343 RAB3GAP1Q15042 981 aa17.46■□□□□ 0.38
CCDC57-203ENST00000392343 NPATQ14207 1427 aa17.45■□□□□ 0.38
CCDC57-203ENST00000392343 TBC1D9Q6ZT07 1266 aa17.45■□□□□ 0.38
CCDC57-203ENST00000392343 KIF16BQ96L93 1317 aa17.45■□□□□ 0.38
CCDC57-203ENST00000392343 DIAPH1O60610 1272 aaKnown RBP17.45■□□□□ 0.38
CCDC57-203ENST00000392343 TSPYL6Q8N831 410 aa17.45■□□□□ 0.38
CCDC57-203ENST00000392343 TULP4Q9NRJ4 1543 aa17.45■□□□□ 0.38
CCDC57-203ENST00000392343 NCOA3Q9Y6Q9 1424 aa17.44■□□□□ 0.38
CCDC57-203ENST00000392343 ZC3H13Q5T200 1668 aaKnown RBP17.44■□□□□ 0.38
CCDC57-203ENST00000392343 HMOX1P09601 288 aa17.44■□□□□ 0.38
CCDC57-203ENST00000392343 GAS2L2Q8NHY3 880 aa17.44■□□□□ 0.38
CCDC57-203ENST00000392343 ADGRB3O60242 1522 aa17.44■□□□□ 0.38
CCDC57-203ENST00000392343 ADGRB2O60241 1585 aa17.44■□□□□ 0.38
CCDC57-203ENST00000392343 SETBP1Q9Y6X0 1596 aa17.44■□□□□ 0.38
CCDC57-203ENST00000392343 NEURL4Q96JN8 1562 aa17.43■□□□□ 0.38
CCDC57-203ENST00000392343 HSP90AA2PQ14568 343 aaPredicted RBP17.43■□□□□ 0.38
CCDC57-203ENST00000392343 BMP2KLQ5H9B9 411 aa17.43■□□□□ 0.38
CCDC57-203ENST00000392343 ZBTB7BO15156 539 aaPredicted RBP17.42■□□□□ 0.38
CCDC57-203ENST00000392343 PRKAR2BP31323 418 aa17.42■□□□□ 0.38
CCDC57-203ENST00000392343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCDC57-203ENST00000392343 K7ELQ4 463 aaPredicted RBP17.42■□□□□ 0.38
CCDC57-203ENST00000392343 AK9Q5TCS8 1911 aa17.42■□□□□ 0.38
CCDC57-203ENST00000392343 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
CCDC57-203ENST00000392343 SIRT2Q8IXJ6 389 aa17.42■□□□□ 0.38
CCDC57-203ENST00000392343 ABCC11Q96J66 1382 aa17.42■□□□□ 0.38
CCDC57-203ENST00000392343 UHRF1BP1LA0JNW5 1464 aa17.41■□□□□ 0.38
CCDC57-203ENST00000392343 NSD2O96028 1365 aa17.41■□□□□ 0.38
CCDC57-203ENST00000392343 ATAD2Q6PL18 1390 aa17.41■□□□□ 0.38
CCDC57-203ENST00000392343 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
CCDC57-203ENST00000392343 PHACTR3Q96KR7 559 aa17.41■□□□□ 0.38
CCDC57-203ENST00000392343 NCLP19338 710 aaKnown RBP17.4■□□□□ 0.38
CCDC57-203ENST00000392343 PPLO60437 1756 aa17.4■□□□□ 0.38
CCDC57-203ENST00000392343 VGFO15240 615 aaPredicted RBP17.39■□□□□ 0.37
CCDC57-203ENST00000392343 VSIG10Q8N0Z9 540 aa17.39■□□□□ 0.37
CCDC57-203ENST00000392343 DDX49Q9Y6V7 483 aaKnown RBP17.39■□□□□ 0.37
CCDC57-203ENST00000392343 IL16Q14005 1332 aa17.39■□□□□ 0.37
CCDC57-203ENST00000392343 CIZ1Q9ULV3 898 aaPredicted RBP17.39■□□□□ 0.37
CCDC57-203ENST00000392343 USP32Q8NFA0 1604 aa17.39■□□□□ 0.37
CCDC57-203ENST00000392343 GLI2P10070 1586 aa17.39■□□□□ 0.37
CCDC57-203ENST00000392343 PRAM1Q96QH2 718 aa17.38■□□□□ 0.37
CCDC57-203ENST00000392343 ALDH1L2Q3SY69 923 aa17.38■□□□□ 0.37
CCDC57-203ENST00000392343 APBB1O00213 710 aa17.38■□□□□ 0.37
CCDC57-203ENST00000392343 VAMP4O75379 141 aa17.38■□□□□ 0.37
CCDC57-203ENST00000392343 C16orf71Q8IYS4 520 aaPredicted RBP17.38■□□□□ 0.37
CCDC57-203ENST00000392343 KIDINS220Q9ULH0 1771 aa17.37■□□□□ 0.37
CCDC57-203ENST00000392343 CABP1Q9NZU7 370 aa17.37■□□□□ 0.37
CCDC57-203ENST00000392343 ABCA9Q8IUA7 1624 aa17.37■□□□□ 0.37
CCDC57-203ENST00000392343 ARAP3Q8WWN8 1544 aa17.37■□□□□ 0.37
CCDC57-203ENST00000392343 SKOR2Q2VWA4 1001 aaPredicted RBP17.37■□□□□ 0.37
CCDC57-203ENST00000392343 MRPL50Q8N5N7 158 aaKnown RBP17.37■□□□□ 0.37
CCDC57-203ENST00000392343 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
CCDC57-203ENST00000392343 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
CCDC57-203ENST00000392343 GCC1Q96CN9 775 aa17.36■□□□□ 0.37
CCDC57-203ENST00000392343 NASPP49321 788 aaPredicted RBP17.36■□□□□ 0.37
CCDC57-203ENST00000392343 MCTP1Q6DN14 999 aa17.36■□□□□ 0.37
CCDC57-203ENST00000392343 RPGRIP1LQ68CZ1 1315 aa17.36■□□□□ 0.37
CCDC57-203ENST00000392343 BAG4O95429 457 aaKnown RBP17.35■□□□□ 0.37
CCDC57-203ENST00000392343 GSPT1P15170 499 aaKnown RBP17.35■□□□□ 0.37
CCDC57-203ENST00000392343 PKP1Q13835 747 aa17.35■□□□□ 0.37
CCDC57-203ENST00000392343 IDI1Q13907 227 aa17.35■□□□□ 0.37
CCDC57-203ENST00000392343 ISY1Q9ULR0 285 aaKnown RBP17.35■□□□□ 0.37
CCDC57-203ENST00000392343 CHAMP1Q96JM3 812 aa17.34■□□□□ 0.37
CCDC57-203ENST00000392343 GOLGA6L22H0YM25 854 aa17.34■□□□□ 0.37
CCDC57-203ENST00000392343 ARHGEF28Q8N1W1 1705 aaKnown RBP17.33■□□□□ 0.37
CCDC57-203ENST00000392343 CAMSAP1Q5T5Y3 1602 aa17.33■□□□□ 0.37
CCDC57-203ENST00000392343 FCHSD2O94868 740 aa17.33■□□□□ 0.36
CCDC57-203ENST00000392343 PUS7Q96PZ0 661 aaKnown RBP17.33■□□□□ 0.36
CCDC57-203ENST00000392343 FAM83GA6ND36 823 aa17.33■□□□□ 0.36
CCDC57-203ENST00000392343 DCTN1Q14203 1278 aa17.33■□□□□ 0.36
CCDC57-203ENST00000392343 CAVIN1Q6NZI2 390 aaKnown RBP17.33■□□□□ 0.36
CCDC57-203ENST00000392343 MBIPQ9NS73 344 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms