RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 ABCA8O94911 1581 aa20.44■□□□□ 0.86
SNX9-201ENST00000392185 TATP17735 454 aaPredicted RBP20.44■□□□□ 0.86
SNX9-201ENST00000392185 ATF7IPQ6VMQ6 1270 aa20.44■□□□□ 0.86
SNX9-201ENST00000392185 GZF1Q9H116 711 aaPredicted RBP20.44■□□□□ 0.86
SNX9-201ENST00000392185 ZMYM3Q14202 1370 aa20.43■□□□□ 0.86
SNX9-201ENST00000392185 PLCB2Q00722 1185 aa20.43■□□□□ 0.86
SNX9-201ENST00000392185 CCDC30Q5VVM6 783 aa20.43■□□□□ 0.86
SNX9-201ENST00000392185 RIMS2Q9UQ26 1411 aa20.43■□□□□ 0.86
SNX9-201ENST00000392185 ATP7AQ04656 1500 aa20.43■□□□□ 0.86
SNX9-201ENST00000392185 NUTM2BA6NNL0 878 aaPredicted RBP20.42■□□□□ 0.86
SNX9-201ENST00000392185 NUTM2EB1AL46 878 aaPredicted RBP20.42■□□□□ 0.86
SNX9-201ENST00000392185 NUTM2AQ8IVF1 878 aaPredicted RBP20.42■□□□□ 0.86
SNX9-201ENST00000392185 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
SNX9-201ENST00000392185 UBTFL1P0CB47 393 aaPredicted RBP20.42■□□□□ 0.86
SNX9-201ENST00000392185 SKAP1Q86WV1 359 aa20.42■□□□□ 0.86
SNX9-201ENST00000392185 TRIM44Q96DX7 344 aaPredicted RBP20.41■□□□□ 0.86
SNX9-201ENST00000392185 PDZRN3Q9UPQ7 1066 aa20.41■□□□□ 0.86
SNX9-201ENST00000392185 PER1O15534 1290 aaPredicted RBP20.4■□□□□ 0.86
SNX9-201ENST00000392185 SSH1Q8WYL5 1049 aa20.39■□□□□ 0.85
SNX9-201ENST00000392185 FRAT2O75474 233 aaPredicted RBP20.38■□□□□ 0.85
SNX9-201ENST00000392185 ZRSR1Q15695 479 aaKnown RBP20.38■□□□□ 0.85
SNX9-201ENST00000392185 HSP90AB2PQ58FF8 381 aa20.38■□□□□ 0.85
SNX9-201ENST00000392185 GOLGA6L4A6NEF3 574 aa20.38■□□□□ 0.85
SNX9-201ENST00000392185 PIP4K2BP78356 416 aa20.38■□□□□ 0.85
SNX9-201ENST00000392185 DUSP27Q5VZP5 1158 aa20.38■□□□□ 0.85
SNX9-201ENST00000392185 FOXD4L5Q5VV16 416 aaPredicted RBP20.38■□□□□ 0.85
SNX9-201ENST00000392185 FOXD4L4Q8WXT5 416 aaPredicted RBP20.38■□□□□ 0.85
SNX9-201ENST00000392185 KDM6BO15054 1643 aa20.37■□□□□ 0.85
SNX9-201ENST00000392185 RBM42Q9BTD8 480 aaKnown RBP20.37■□□□□ 0.85
SNX9-201ENST00000392185 FAM83GA6ND36 823 aa20.37■□□□□ 0.85
SNX9-201ENST00000392185 IFIT2P09913 472 aaKnown RBP20.37■□□□□ 0.85
SNX9-201ENST00000392185 G3BP1Q13283 466 aaKnown RBP eCLIP20.37■□□□□ 0.85
SNX9-201ENST00000392185 HSPA2P54652 639 aa20.36■□□□□ 0.85
SNX9-201ENST00000392185 MEX3CQ5U5Q3 659 aaKnown RBP20.36■□□□□ 0.85
SNX9-201ENST00000392185 SURF6O75683 361 aaKnown RBP20.36■□□□□ 0.85
SNX9-201ENST00000392185 RARSP54136 660 aaKnown RBP20.36■□□□□ 0.85
SNX9-201ENST00000392185 KCNH5Q8NCM2 988 aa20.36■□□□□ 0.85
SNX9-201ENST00000392185 MVPQ14764 893 aaKnown RBP20.35■□□□□ 0.85
SNX9-201ENST00000392185 YEATS2Q9ULM3 1422 aa20.35■□□□□ 0.85
SNX9-201ENST00000392185 FAM177BA6PVY3 158 aa20.35■□□□□ 0.85
SNX9-201ENST00000392185 TMEM57Q8N5G2 664 aa20.35■□□□□ 0.85
SNX9-201ENST00000392185 ISY1Q9ULR0 285 aaKnown RBP20.35■□□□□ 0.85
SNX9-201ENST00000392185 PTMAP06454 111 aaKnown RBP20.34■□□□□ 0.85
SNX9-201ENST00000392185 DIAPH3Q9NSV4 1193 aa20.34■□□□□ 0.85
SNX9-201ENST00000392185 CHD1O14646 1710 aa20.34■□□□□ 0.85
SNX9-201ENST00000392185 MSH5O43196 834 aa20.33■□□□□ 0.85
SNX9-201ENST00000392185 GNAI3P08754 354 aa20.33■□□□□ 0.85
SNX9-201ENST00000392185 KCNA6P17658 529 aa20.33■□□□□ 0.85
SNX9-201ENST00000392185 ANO2Q9NQ90 1003 aa20.33■□□□□ 0.85
SNX9-201ENST00000392185 ANKRD36BQ8N2N9 1353 aa20.33■□□□□ 0.85
SNX9-201ENST00000392185 MYL6BP14649 208 aa20.33■□□□□ 0.85
SNX9-201ENST00000392185 FANCIQ9NVI1 1328 aa20.33■□□□□ 0.84
SNX9-201ENST00000392185 ARHGEF12Q9NZN5 1544 aa20.32■□□□□ 0.84
SNX9-201ENST00000392185 TTC21BQ7Z4L5 1316 aa20.32■□□□□ 0.84
SNX9-201ENST00000392185 GNAT3A8MTJ3 354 aa20.32■□□□□ 0.84
SNX9-201ENST00000392185 CABP4P57796 275 aa20.32■□□□□ 0.84
SNX9-201ENST00000392185 KRT28Q7Z3Y7 464 aa20.32■□□□□ 0.84
SNX9-201ENST00000392185 PARD3Q8TEW0 1356 aa20.32■□□□□ 0.84
SNX9-201ENST00000392185 AAMPQ13685 434 aa20.32■□□□□ 0.84
SNX9-201ENST00000392185 CT47B1P0C2W7 299 aaPredicted RBP20.31■□□□□ 0.84
SNX9-201ENST00000392185 DEKP35659 375 aaKnown RBP20.31■□□□□ 0.84
SNX9-201ENST00000392185 TOMM22Q9NS69 142 aa20.31■□□□□ 0.84
SNX9-201ENST00000392185 BTBD11A6QL63 1104 aa20.31■□□□□ 0.84
SNX9-201ENST00000392185 ST18O60284 1047 aa20.31■□□□□ 0.84
SNX9-201ENST00000392185 RTN4Q9NQC3 1192 aaKnown RBP20.31■□□□□ 0.84
SNX9-201ENST00000392185 MPRIPQ6WCQ1 1025 aa20.3■□□□□ 0.84
SNX9-201ENST00000392185 GBP4Q96PP9 640 aa20.3■□□□□ 0.84
SNX9-201ENST00000392185 FOXD4L6Q3SYB3 417 aaPredicted RBP20.3■□□□□ 0.84
SNX9-201ENST00000392185 FOXD4L3Q6VB84 417 aaPredicted RBP20.3■□□□□ 0.84
SNX9-201ENST00000392185 CHRNA2Q15822 529 aa20.29■□□□□ 0.84
SNX9-201ENST00000392185 NEUROD6Q96NK8 337 aa20.29■□□□□ 0.84
SNX9-201ENST00000392185 SPG7Q9UQ90 795 aa20.29■□□□□ 0.84
SNX9-201ENST00000392185 ATP10AO60312 1499 aa20.29■□□□□ 0.84
SNX9-201ENST00000392185 HSP90B1P14625 803 aaKnown RBP20.29■□□□□ 0.84
SNX9-201ENST00000392185 AEBP1Q8IUX7 1158 aa20.29■□□□□ 0.84
SNX9-201ENST00000392185 POLKQ9UBT6 870 aa20.29■□□□□ 0.84
SNX9-201ENST00000392185 NPATQ14207 1427 aa20.29■□□□□ 0.84
SNX9-201ENST00000392185 UHRF1BP1Q6BDS2 1440 aa20.28■□□□□ 0.84
SNX9-201ENST00000392185 PPIP5K1Q6PFW1 1433 aa20.28■□□□□ 0.84
SNX9-201ENST00000392185 TTC37Q6PGP7 1564 aa20.28■□□□□ 0.84
SNX9-201ENST00000392185 SAMD9LQ8IVG5 1584 aa20.28■□□□□ 0.84
SNX9-201ENST00000392185 PTCD1O75127 700 aaKnown RBP20.27■□□□□ 0.84
SNX9-201ENST00000392185 NSD2O96028 1365 aa20.27■□□□□ 0.84
SNX9-201ENST00000392185 GNAI2P04899 355 aa20.27■□□□□ 0.84
SNX9-201ENST00000392185 ASXL1Q8IXJ9 1541 aa20.27■□□□□ 0.84
SNX9-201ENST00000392185 MAST1Q9Y2H9 1570 aa20.27■□□□□ 0.84
SNX9-201ENST00000392185 REC8O95072 547 aa20.27■□□□□ 0.84
SNX9-201ENST00000392185 C22orf23Q9BZE7 217 aa20.26■□□□□ 0.83
SNX9-201ENST00000392185 SRCIN1Q9C0H9 1055 aa20.26■□□□□ 0.83
SNX9-201ENST00000392185 YTHDC2Q9H6S0 1430 aaKnown RBP20.26■□□□□ 0.83
SNX9-201ENST00000392185 F6X3S4 739 aa20.26■□□□□ 0.83
SNX9-201ENST00000392185 A0A1W2PP64 1363 aa20.25■□□□□ 0.83
SNX9-201ENST00000392185 NINLQ9Y2I6 1382 aa20.25■□□□□ 0.83
SNX9-201ENST00000392185 GNL2Q13823 731 aaKnown RBP20.24■□□□□ 0.83
SNX9-201ENST00000392185 CLASRPQ8N2M8 674 aaKnown RBP20.24■□□□□ 0.83
SNX9-201ENST00000392185 HSP90AB4PQ58FF6 505 aa20.24■□□□□ 0.83
SNX9-201ENST00000392185 IFT57Q9NWB7 429 aa20.24■□□□□ 0.83
SNX9-201ENST00000392185 ADAMTS2O95450 1211 aa20.24■□□□□ 0.83
SNX9-201ENST00000392185 TULP1O00294 542 aaPredicted RBP20.23■□□□□ 0.83
SNX9-201ENST00000392185 NKTRP30414 1462 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms