RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 SRPK2P78362 688 aaKnown RBP5.24□□□□□ -1.57
TRAJ40-201ENST00000390497 PTK2Q05397 1052 aa5.24□□□□□ -1.57
TRAJ40-201ENST00000390497 MSS51Q4VC12 460 aa5.24□□□□□ -1.57
TRAJ40-201ENST00000390497 CFAP70Q5T0N1 1121 aa5.24□□□□□ -1.57
TRAJ40-201ENST00000390497 RNF19BQ6ZMZ0 732 aa5.24□□□□□ -1.57
TRAJ40-201ENST00000390497 RETREG2Q8NC44 543 aa5.24□□□□□ -1.57
TRAJ40-201ENST00000390497 NFATC2IPQ8NCF5 419 aa5.24□□□□□ -1.57
TRAJ40-201ENST00000390497 USTQ9Y2C2 406 aa5.24□□□□□ -1.57
TRAJ40-201ENST00000390497 F12P00748 615 aaPredicted RBP5.23□□□□□ -1.57
TRAJ40-201ENST00000390497 BCAMP50895 628 aa5.23□□□□□ -1.57
TRAJ40-201ENST00000390497 PDXDC2PQ6P474 469 aa5.23□□□□□ -1.57
TRAJ40-201ENST00000390497 SPSB2Q99619 263 aa5.23□□□□□ -1.57
TRAJ40-201ENST00000390497 CCDC9Q9Y3X0 531 aaKnown RBP5.23□□□□□ -1.57
TRAJ40-201ENST00000390497 LZTS3O60299 673 aaPredicted RBP5.22□□□□□ -1.57
TRAJ40-201ENST00000390497 CCNYL3P0C7X3 344 aa5.22□□□□□ -1.57
TRAJ40-201ENST00000390497 CTHP32929 405 aa5.22□□□□□ -1.57
TRAJ40-201ENST00000390497 MMP16P51512 607 aa5.22□□□□□ -1.57
TRAJ40-201ENST00000390497 KCNH2Q12809 1159 aa5.22□□□□□ -1.57
TRAJ40-201ENST00000390497 AEBP1Q8IUX7 1158 aa5.22□□□□□ -1.57
TRAJ40-201ENST00000390497 VRTNQ9H8Y1 702 aa5.22□□□□□ -1.57
TRAJ40-201ENST00000390497 WBP1LQ9NX94 342 aa5.22□□□□□ -1.57
TRAJ40-201ENST00000390497 ATP9BO43861 1147 aa5.21□□□□□ -1.58
TRAJ40-201ENST00000390497 DXOO77932 396 aaKnown RBP5.21□□□□□ -1.58
TRAJ40-201ENST00000390497 ATG7O95352 703 aa5.21□□□□□ -1.58
TRAJ40-201ENST00000390497 BRD1O95696 1058 aa5.21□□□□□ -1.58
TRAJ40-201ENST00000390497 FBXO45P0C2W1 286 aa5.21□□□□□ -1.58
TRAJ40-201ENST00000390497 NBPF14Q5TI25 921 aa5.21□□□□□ -1.58
TRAJ40-201ENST00000390497 NUDT12Q9BQG2 462 aa5.21□□□□□ -1.58
TRAJ40-201ENST00000390497 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.2□□□□□ -1.58
TRAJ40-201ENST00000390497 THSD4Q6ZMP0 1018 aa5.2□□□□□ -1.58
TRAJ40-201ENST00000390497 FAM160A2Q8N612 972 aaPredicted RBP5.2□□□□□ -1.58
TRAJ40-201ENST00000390497 MAFBQ9Y5Q3 323 aaPredicted RBP5.2□□□□□ -1.58
TRAJ40-201ENST00000390497 ZPR1O75312 459 aa5.19□□□□□ -1.58
TRAJ40-201ENST00000390497 KCNA1Q09470 495 aa5.19□□□□□ -1.58
TRAJ40-201ENST00000390497 ELOAQ14241 798 aaKnown RBP5.19□□□□□ -1.58
TRAJ40-201ENST00000390497 TBC1D9Q6ZT07 1266 aa5.19□□□□□ -1.58
TRAJ40-201ENST00000390497 UCN2Q96RP3 112 aa5.19□□□□□ -1.58
TRAJ40-201ENST00000390497 CEP126Q9P2H0 1117 aa5.19□□□□□ -1.58
TRAJ40-201ENST00000390497 MYT1LQ9UL68 1186 aa5.19□□□□□ -1.58
TRAJ40-201ENST00000390497 MAP7D1Q3KQU3 841 aa5.18□□□□□ -1.58
TRAJ40-201ENST00000390497 SLFNL1Q499Z3 407 aa5.18□□□□□ -1.58
TRAJ40-201ENST00000390497 B4GALNT3Q6L9W6 998 aa5.18□□□□□ -1.58
TRAJ40-201ENST00000390497 CCDC125Q86Z20 511 aa5.18□□□□□ -1.58
TRAJ40-201ENST00000390497 PLEKHM2Q8IWE5 1019 aa5.18□□□□□ -1.58
TRAJ40-201ENST00000390497 MAP10Q9P2G4 905 aa5.18□□□□□ -1.58
TRAJ40-201ENST00000390497 ADH1BP00325 375 aa5.17□□□□□ -1.58
TRAJ40-201ENST00000390497 COPS2P61201 443 aa5.17□□□□□ -1.58
TRAJ40-201ENST00000390497 KANK4Q5T7N3 995 aaPredicted RBP5.17□□□□□ -1.58
TRAJ40-201ENST00000390497 ZBTB33Q86T24 672 aa5.17□□□□□ -1.58
TRAJ40-201ENST00000390497 IL21Q9HBE4 155 aa5.17□□□□□ -1.58
TRAJ40-201ENST00000390497 SKIP12755 728 aa5.16□□□□□ -1.58
TRAJ40-201ENST00000390497 LCE2DQ5TA82 110 aaPredicted RBP5.16□□□□□ -1.58
TRAJ40-201ENST00000390497 KCTD12Q96CX2 325 aaKnown RBP5.16□□□□□ -1.58
TRAJ40-201ENST00000390497 ARHGAP9Q9BRR9 750 aa5.16□□□□□ -1.58
TRAJ40-201ENST00000390497 SLC6A16Q9GZN6 736 aa5.16□□□□□ -1.58
TRAJ40-201ENST00000390497 ATP5J2-PTCD1G3V325 749 aa5.15□□□□□ -1.59
TRAJ40-201ENST00000390497 RANGAP1P46060 587 aaPredicted RBP5.15□□□□□ -1.59
TRAJ40-201ENST00000390497 RNF20Q5VTR2 975 aa5.15□□□□□ -1.59
TRAJ40-201ENST00000390497 LARP1Q6PKG0 1096 aaKnown RBP5.15□□□□□ -1.59
TRAJ40-201ENST00000390497 BPHLQ86WA6 291 aaPredicted RBP5.15□□□□□ -1.59
TRAJ40-201ENST00000390497 RNF135Q8IUD6 432 aa5.15□□□□□ -1.59
TRAJ40-201ENST00000390497 PHTF2Q8N3S3 785 aa5.15□□□□□ -1.59
TRAJ40-201ENST00000390497 CCDC24Q8N4L8 307 aa5.15□□□□□ -1.59
TRAJ40-201ENST00000390497 TRIM52Q96A61 297 aa5.15□□□□□ -1.59
TRAJ40-201ENST00000390497 MTRQ99707 1265 aa5.15□□□□□ -1.59
TRAJ40-201ENST00000390497 UNC93B1Q9H1C4 597 aa5.15□□□□□ -1.59
TRAJ40-201ENST00000390497 USP17L3A6NCW0 530 aa5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 USP17L4A6NCW7 530 aa5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 CDCA8Q53HL2 280 aa5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 TJAP1Q5JTD0 557 aa5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 USP17L2Q6R6M4 530 aa5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 USP17L1Q7RTZ2 530 aa5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 DZIP3Q86Y13 1208 aaKnown RBP5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 ADAM32Q8TC27 787 aa5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 GZF1Q9H116 711 aaPredicted RBP5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 MKRN1Q9UHC7 482 aaKnown RBP5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 CHIC2Q9UKJ5 165 aa5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 CDV3Q9UKY7 258 aaKnown RBP5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 PCDHB9Q9Y5E1 797 aa5.14□□□□□ -1.59
TRAJ40-201ENST00000390497 FAM196BA6NMK8 535 aa5.13□□□□□ -1.59
TRAJ40-201ENST00000390497 USP17L5A8MUK1 530 aa5.13□□□□□ -1.59
TRAJ40-201ENST00000390497 ATP1A2P50993 1020 aa5.13□□□□□ -1.59
TRAJ40-201ENST00000390497 EML3Q32P44 896 aa5.13□□□□□ -1.59
TRAJ40-201ENST00000390497 TMCO4Q5TGY1 634 aa5.13□□□□□ -1.59
TRAJ40-201ENST00000390497 SH3BP5LQ7L8J4 393 aa5.13□□□□□ -1.59
TRAJ40-201ENST00000390497 TRIM50Q86XT4 487 aa5.13□□□□□ -1.59
TRAJ40-201ENST00000390497 SIRT1Q96EB6 747 aa5.13□□□□□ -1.59
TRAJ40-201ENST00000390497 CDCA7Q9BWT1 371 aaPredicted RBP5.13□□□□□ -1.59
TRAJ40-201ENST00000390497 KRTAP3-3Q9BYR6 98 aa5.13□□□□□ -1.59
TRAJ40-201ENST00000390497 KRTAP3-2Q9BYR7 98 aa5.13□□□□□ -1.59
TRAJ40-201ENST00000390497 TMEM88BA6NKF7 163 aa5.12□□□□□ -1.59
TRAJ40-201ENST00000390497 PIK3CDO00329 1044 aa5.12□□□□□ -1.59
TRAJ40-201ENST00000390497 RASA1P20936 1047 aa5.12□□□□□ -1.59
TRAJ40-201ENST00000390497 AGERQ15109 404 aa5.12□□□□□ -1.59
TRAJ40-201ENST00000390497 PTCRAQ6ISU1 281 aaPredicted RBP5.12□□□□□ -1.59
TRAJ40-201ENST00000390497 SH3RF1Q7Z6J0 888 aa5.12□□□□□ -1.59
TRAJ40-201ENST00000390497 NPM2Q86SE8 214 aaKnown RBP5.12□□□□□ -1.59
TRAJ40-201ENST00000390497 PLPP7Q8NBV4 271 aa5.12□□□□□ -1.59
TRAJ40-201ENST00000390497 FAM200AQ8TCP9 573 aa5.12□□□□□ -1.59
TRAJ40-201ENST00000390497 OCSTAMPQ9BR26 566 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms