RNA–Protein interactions for RNA: ENST00000389735.7

HMCES-202, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCES, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-202ENST00000389735 C1orf167Q5SNV9 1468 aa34.44■■■■□ 3.1
HMCES-202ENST00000389735 PNISRQ8TF01 805 aaKnown RBP34.44■■■■□ 3.1
HMCES-202ENST00000389735 ZNF692Q9BU19 519 aaPredicted RBP34.43■■■■□ 3.1
HMCES-202ENST00000389735 EDC4Q6P2E9 1401 aaKnown RBP34.42■■■■□ 3.1
HMCES-202ENST00000389735 PLEKHG3A1L390 1219 aa34.42■■■■□ 3.1
HMCES-202ENST00000389735 SLAIN2Q9P270 581 aa34.41■■■■□ 3.1
HMCES-202ENST00000389735 FYB1O15117 783 aa34.37■■■■□ 3.09
HMCES-202ENST00000389735 ORAI2Q96SN7 254 aa34.35■■■■□ 3.09
HMCES-202ENST00000389735 ACEP12821 1306 aa34.35■■■■□ 3.09
HMCES-202ENST00000389735 ESCO1Q5FWF5 840 aa34.34■■■■□ 3.09
HMCES-202ENST00000389735 HNRNPUQ00839 825 aaKnown RBP eCLIP34.33■■■■□ 3.09
HMCES-202ENST00000389735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.33■■■■□ 3.09
HMCES-202ENST00000389735 GGNBP2Q9H3C7 697 aa34.33■■■■□ 3.09
HMCES-202ENST00000389735 NRKQ7Z2Y5 1582 aa34.3■■■■□ 3.08
HMCES-202ENST00000389735 TNNT2P45379 298 aaPredicted RBP34.29■■■■□ 3.08
HMCES-202ENST00000389735 BRINP3Q76B58 766 aa34.29■■■■□ 3.08
HMCES-202ENST00000389735 POLR3AO14802 1390 aaPredicted RBP34.29■■■■□ 3.08
HMCES-202ENST00000389735 PHF8Q9UPP1 1060 aa34.28■■■■□ 3.08
HMCES-202ENST00000389735 HSPA1LP34931 641 aa34.28■■■■□ 3.08
HMCES-202ENST00000389735 PMFBP1Q8TBY8 1022 aa34.28■■■■□ 3.08
HMCES-202ENST00000389735 USP6P35125 1406 aa34.28■■■■□ 3.08
HMCES-202ENST00000389735 KIF1AQ12756 1690 aa34.27■■■■□ 3.08
HMCES-202ENST00000389735 ROBO1Q9Y6N7 1651 aa34.26■■■■□ 3.08
HMCES-202ENST00000389735 NGDNQ8NEJ9 315 aaKnown RBP34.25■■■■□ 3.07
HMCES-202ENST00000389735 INSRP06213 1382 aa34.21■■■■□ 3.07
HMCES-202ENST00000389735 TTC21BQ7Z4L5 1316 aa34.21■■■■□ 3.07
HMCES-202ENST00000389735 NME9Q86XW9 330 aa34.2■■■■□ 3.07
HMCES-202ENST00000389735 WDR43Q15061 677 aaKnown RBP eCLIP34.19■■■■□ 3.06
HMCES-202ENST00000389735 FOXO3O43524 673 aa34.18■■■■□ 3.06
HMCES-202ENST00000389735 MTHFSP49914 203 aa34.18■■■■□ 3.06
HMCES-202ENST00000389735 SSH2Q76I76 1423 aa34.18■■■■□ 3.06
HMCES-202ENST00000389735 TTC21AQ8NDW8 1320 aa34.17■■■■□ 3.06
HMCES-202ENST00000389735 COG3Q96JB2 828 aa34.16■■■■□ 3.06
HMCES-202ENST00000389735 CFAP53Q96M91 514 aa34.16■■■■□ 3.06
HMCES-202ENST00000389735 NHSL1Q5SYE7 1610 aa34.16■■■■□ 3.06
HMCES-202ENST00000389735 DDX17Q92841 729 aaKnown RBP34.16■■■■□ 3.06
HMCES-202ENST00000389735 ZBED9Q6R2W3 1325 aa34.12■■■■□ 3.05
HMCES-202ENST00000389735 NPHP3Q7Z494 1330 aa34.12■■■■□ 3.05
HMCES-202ENST00000389735 MAP2P11137 1827 aaKnown RBP34.11■■■■□ 3.05
HMCES-202ENST00000389735 BLMP54132 1417 aaPredicted RBP34.11■■■■□ 3.05
HMCES-202ENST00000389735 ADAMTS8Q9UP79 889 aa34.11■■■■□ 3.05
HMCES-202ENST00000389735 AHDC1Q5TGY3 1603 aaPredicted RBP34.1■■■■□ 3.05
HMCES-202ENST00000389735 PXDNQ92626 1479 aa34.09■■■■□ 3.05
HMCES-202ENST00000389735 PSME1Q06323 249 aa34.09■■■■□ 3.05
HMCES-202ENST00000389735 ZRANB1Q9UGI0 708 aa34.09■■■■□ 3.05
HMCES-202ENST00000389735 SHPRHQ149N8 1683 aa34.09■■■■□ 3.05
HMCES-202ENST00000389735 XPCQ01831 940 aaPredicted RBP34.08■■■■□ 3.05
HMCES-202ENST00000389735 OVOS2A0A0J9YW53 1432 aa34.07■■■■□ 3.04
HMCES-202ENST00000389735 OVOS2Q6IE36 1432 aa34.07■■■■□ 3.04
HMCES-202ENST00000389735 AATKQ6ZMQ8 1374 aa34.07■■■■□ 3.04
HMCES-202ENST00000389735 KRT28Q7Z3Y7 464 aa34.06■■■■□ 3.04
HMCES-202ENST00000389735 SOS2Q07890 1332 aaPredicted RBP34.06■■■■□ 3.04
HMCES-202ENST00000389735 TRPM3Q9HCF6 1732 aaPredicted RBP34.05■■■■□ 3.04
HMCES-202ENST00000389735 PIK3C2AO00443 1686 aa34.04■■■■□ 3.04
HMCES-202ENST00000389735 PHLPP1O60346 1717 aa34.02■■■■□ 3.04
HMCES-202ENST00000389735 USP31Q70CQ4 1352 aa34.02■■■■□ 3.04
HMCES-202ENST00000389735 POLKQ9UBT6 870 aa34.01■■■■□ 3.04
HMCES-202ENST00000389735 USP54Q70EL1 1684 aa33.99■■■■□ 3.03
HMCES-202ENST00000389735 PNPLA6Q8IY17 1366 aa33.99■■■■□ 3.03
HMCES-202ENST00000389735 SMG6Q86US8 1419 aaKnown RBP33.99■■■■□ 3.03
HMCES-202ENST00000389735 COL16A1Q07092 1604 aaPredicted RBP33.98■■■■□ 3.03
HMCES-202ENST00000389735 COL3A1P02461 1466 aaPredicted RBP33.98■■■■□ 3.03
HMCES-202ENST00000389735 SBNO1A3KN83 1393 aa33.98■■■■□ 3.03
HMCES-202ENST00000389735 PAK3O75914 559 aaPredicted RBP33.96■■■■□ 3.03
HMCES-202ENST00000389735 FBLN1P23142 703 aa33.95■■■■□ 3.03
HMCES-202ENST00000389735 NUDCQ9Y266 331 aa33.95■■■■□ 3.03
HMCES-202ENST00000389735 CDK12Q9NYV4 1490 aaPredicted RBP33.95■■■■□ 3.02
HMCES-202ENST00000389735 ALS2Q96Q42 1657 aa33.94■■■■□ 3.02
HMCES-202ENST00000389735 TNS3Q68CZ2 1445 aa33.93■■■■□ 3.02
HMCES-202ENST00000389735 PPM1GO15355 546 aaPredicted RBP33.93■■■■□ 3.02
HMCES-202ENST00000389735 ABTB2Q8N961 1025 aa33.93■■■■□ 3.02
HMCES-202ENST00000389735 SPATA31A3Q5VYP0 1347 aa33.93■■■■□ 3.02
HMCES-202ENST00000389735 NLRP6P59044 892 aa33.93■■■■□ 3.02
HMCES-202ENST00000389735 EMILIN1Q9Y6C2 1016 aa33.92■■■■□ 3.02
HMCES-202ENST00000389735 MARF1Q9Y4F3 1742 aaKnown RBP33.92■■■■□ 3.02
HMCES-202ENST00000389735 DIAPH1O60610 1272 aaKnown RBP33.9■■■■□ 3.02
HMCES-202ENST00000389735 RRS1Q15050 365 aaKnown RBP33.89■■■■□ 3.02
HMCES-202ENST00000389735 LRRC59Q96AG4 307 aaKnown RBP33.89■■■■□ 3.02
HMCES-202ENST00000389735 SENP3-EIF4A1A0A087X0R7 540 aa33.88■■■■□ 3.01
HMCES-202ENST00000389735 U2AF1L5P0DN76 240 aaPredicted RBP33.86■■■■□ 3.01
HMCES-202ENST00000389735 U2AF1Q01081 240 aaKnown RBP eCLIP33.86■■■■□ 3.01
HMCES-202ENST00000389735 CCDC146Q8IYE0 955 aa33.85■■■■□ 3.01
HMCES-202ENST00000389735 JCADQ9P266 1359 aa33.85■■■■□ 3.01
HMCES-202ENST00000389735 LMOD2Q6P5Q4 547 aa33.85■■■■□ 3.01
HMCES-202ENST00000389735 ARHGEF10O15013 1369 aa33.84■■■■□ 3.01
HMCES-202ENST00000389735 U2SURPO15042 1029 aaKnown RBP33.83■■■■□ 3.01
HMCES-202ENST00000389735 NUTM2GQ5VZR2 741 aa33.83■■■■□ 3.01
HMCES-202ENST00000389735 SALL2Q9Y467 1007 aaPredicted RBP33.83■■■■□ 3.01
HMCES-202ENST00000389735 RUNDC1Q96C34 613 aa33.82■■■■□ 3
HMCES-202ENST00000389735 SOX12O15370 315 aa33.8■■■■□ 3
HMCES-202ENST00000389735 NGEFQ8N5V2 710 aa33.79■■■■□ 3
HMCES-202ENST00000389735 PEAK1Q9H792 1746 aa33.79■■■■□ 3
HMCES-202ENST00000389735 PDE3BQ13370 1112 aa33.77■■■■□ 3
HMCES-202ENST00000389735 COL22A1Q8NFW1 1626 aaPredicted RBP33.77■■■■□ 3
HMCES-202ENST00000389735 APAF1O14727 1248 aa33.77■■■■□ 3
HMCES-202ENST00000389735 MED1Q15648 1581 aaPredicted RBP33.77■■■■□ 3
HMCES-202ENST00000389735 MAP3K19Q56UN5 1328 aa33.77■■■■□ 3
HMCES-202ENST00000389735 CRYBG1Q9Y4K1 1723 aa33.76■■■□□ 2.99
HMCES-202ENST00000389735 IL13P35225 146 aa33.75■■■□□ 2.99
HMCES-202ENST00000389735 PNNQ9H307 717 aaKnown RBP33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms