RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 TTC21AQ8NDW8 1320 aa17.88■□□□□ 0.45
SEC13-203ENST00000383801 ACEP12821 1306 aa17.88■□□□□ 0.45
SEC13-203ENST00000383801 COL3A1P02461 1466 aaPredicted RBP17.87■□□□□ 0.45
SEC13-203ENST00000383801 APAF1O14727 1248 aa17.87■□□□□ 0.45
SEC13-203ENST00000383801 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.87■□□□□ 0.45
SEC13-203ENST00000383801 TRMT2AQ8IZ69 625 aaKnown RBP17.87■□□□□ 0.45
SEC13-203ENST00000383801 USP6P35125 1406 aa17.87■□□□□ 0.45
SEC13-203ENST00000383801 DIAPH1O60610 1272 aaKnown RBP17.86■□□□□ 0.45
SEC13-203ENST00000383801 RCAN3Q9UKA8 241 aa17.86■□□□□ 0.45
SEC13-203ENST00000383801 NRKQ7Z2Y5 1582 aa17.86■□□□□ 0.45
SEC13-203ENST00000383801 SSH2Q76I76 1423 aa17.85■□□□□ 0.45
SEC13-203ENST00000383801 TTC21BQ7Z4L5 1316 aa17.85■□□□□ 0.45
SEC13-203ENST00000383801 E9PSI1 815 aa17.85■□□□□ 0.45
SEC13-203ENST00000383801 POLKQ9UBT6 870 aa17.85■□□□□ 0.45
SEC13-203ENST00000383801 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
SEC13-203ENST00000383801 FMN2Q9NZ56 1722 aa17.84■□□□□ 0.45
SEC13-203ENST00000383801 SLFN5Q08AF3 891 aa17.84■□□□□ 0.45
SEC13-203ENST00000383801 WDR63Q8IWG1 891 aa17.84■□□□□ 0.45
SEC13-203ENST00000383801 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
SEC13-203ENST00000383801 PPP4R2Q9NY27 417 aa17.84■□□□□ 0.45
SEC13-203ENST00000383801 MAP2P11137 1827 aaKnown RBP17.84■□□□□ 0.45
SEC13-203ENST00000383801 CDK12Q9NYV4 1490 aaPredicted RBP17.83■□□□□ 0.44
SEC13-203ENST00000383801 FCHSD2O94868 740 aa17.82■□□□□ 0.44
SEC13-203ENST00000383801 U2AF1L5P0DN76 240 aaPredicted RBP17.82■□□□□ 0.44
SEC13-203ENST00000383801 U2AF1Q01081 240 aaKnown RBP eCLIP17.82■□□□□ 0.44
SEC13-203ENST00000383801 CCDC146Q8IYE0 955 aa17.82■□□□□ 0.44
SEC13-203ENST00000383801 CDCA7LQ96GN5 454 aa17.82■□□□□ 0.44
SEC13-203ENST00000383801 NWD1Q149M9 1564 aa17.82■□□□□ 0.44
SEC13-203ENST00000383801 IQSEC2Q5JU85 1478 aa17.82■□□□□ 0.44
SEC13-203ENST00000383801 DUSP27Q5VZP5 1158 aa17.82■□□□□ 0.44
SEC13-203ENST00000383801 NME9Q86XW9 330 aa17.82■□□□□ 0.44
SEC13-203ENST00000383801 USP31Q70CQ4 1352 aa17.81■□□□□ 0.44
SEC13-203ENST00000383801 NCKAP5LQ9HCH0 1330 aa17.81■□□□□ 0.44
SEC13-203ENST00000383801 WWC1Q8IX03 1113 aa17.81■□□□□ 0.44
SEC13-203ENST00000383801 TCP11L2Q8N4U5 519 aa17.81■□□□□ 0.44
SEC13-203ENST00000383801 NKTRP30414 1462 aaKnown RBP17.81■□□□□ 0.44
SEC13-203ENST00000383801 ADGRL3Q9HAR2 1447 aa17.8■□□□□ 0.44
SEC13-203ENST00000383801 OVOS2A0A0J9YW53 1432 aa17.8■□□□□ 0.44
SEC13-203ENST00000383801 OVOS2Q6IE36 1432 aa17.8■□□□□ 0.44
SEC13-203ENST00000383801 NGDNQ8NEJ9 315 aaKnown RBP17.79■□□□□ 0.44
SEC13-203ENST00000383801 PLEKHF1Q96S99 279 aa17.79■□□□□ 0.44
SEC13-203ENST00000383801 NCOA3Q9Y6Q9 1424 aa17.79■□□□□ 0.44
SEC13-203ENST00000383801 RRP1P56182 461 aaKnown RBP17.78■□□□□ 0.44
SEC13-203ENST00000383801 NALCNQ8IZF0 1738 aa17.78■□□□□ 0.44
SEC13-203ENST00000383801 LRRC7Q96NW7 1537 aa17.78■□□□□ 0.44
SEC13-203ENST00000383801 NEFMP07197 916 aa17.77■□□□□ 0.44
SEC13-203ENST00000383801 RGPD8O14715 1765 aaPredicted RBP17.76■□□□□ 0.43
SEC13-203ENST00000383801 U2SURPO15042 1029 aaKnown RBP17.76■□□□□ 0.43
SEC13-203ENST00000383801 USP54Q70EL1 1684 aa17.76■□□□□ 0.43
SEC13-203ENST00000383801 MAPK8IP3Q9UPT6 1336 aa17.76■□□□□ 0.43
SEC13-203ENST00000383801 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.75■□□□□ 0.43
SEC13-203ENST00000383801 KIF24Q5T7B8 1368 aa17.75■□□□□ 0.43
SEC13-203ENST00000383801 SENP3-EIF4A1A0A087X0R7 540 aa17.75■□□□□ 0.43
SEC13-203ENST00000383801 IL13P35225 146 aa17.74■□□□□ 0.43
SEC13-203ENST00000383801 IL16Q14005 1332 aa17.73■□□□□ 0.43
SEC13-203ENST00000383801 NUTM2FA1L443 756 aa17.73■□□□□ 0.43
SEC13-203ENST00000383801 PMFBP1Q8TBY8 1022 aa17.73■□□□□ 0.43
SEC13-203ENST00000383801 MYH16Q9H6N6 1097 aa17.72■□□□□ 0.43
SEC13-203ENST00000383801 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
SEC13-203ENST00000383801 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
SEC13-203ENST00000383801 TMPOP42166 694 aaKnown RBP17.71■□□□□ 0.43
SEC13-203ENST00000383801 EMILIN1Q9Y6C2 1016 aa17.71■□□□□ 0.43
SEC13-203ENST00000383801 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
SEC13-203ENST00000383801 PPM1GO15355 546 aaPredicted RBP17.69■□□□□ 0.42
SEC13-203ENST00000383801 IRX6P78412 446 aaPredicted RBP17.69■□□□□ 0.42
SEC13-203ENST00000383801 RSPH6AQ9H0K4 717 aa17.69■□□□□ 0.42
SEC13-203ENST00000383801 C19orf44Q9H6X5 657 aa17.69■□□□□ 0.42
SEC13-203ENST00000383801 PROSER2Q86WR7 435 aaPredicted RBP17.69■□□□□ 0.42
SEC13-203ENST00000383801 DCCP43146 1447 aa17.68■□□□□ 0.42
SEC13-203ENST00000383801 CALD1Q05682 793 aaKnown RBP17.68■□□□□ 0.42
SEC13-203ENST00000383801 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
SEC13-203ENST00000383801 PIK3C2AO00443 1686 aa17.67■□□□□ 0.42
SEC13-203ENST00000383801 SBNO1A3KN83 1393 aa17.67■□□□□ 0.42
SEC13-203ENST00000383801 RRS1Q15050 365 aaKnown RBP17.66■□□□□ 0.42
SEC13-203ENST00000383801 NEUROD2Q15784 382 aa17.66■□□□□ 0.42
SEC13-203ENST00000383801 RIPK4P57078 832 aa17.65■□□□□ 0.42
SEC13-203ENST00000383801 LMOD3Q0VAK6 560 aa17.65■□□□□ 0.42
SEC13-203ENST00000383801 C14orf37Q86TY3 774 aa17.65■□□□□ 0.42
SEC13-203ENST00000383801 FLT4P35916 1363 aa17.65■□□□□ 0.42
SEC13-203ENST00000383801 FBLN1P23142 703 aa17.64■□□□□ 0.41
SEC13-203ENST00000383801 PRKAR2BP31323 418 aa17.64■□□□□ 0.41
SEC13-203ENST00000383801 NLRP6P59044 892 aa17.64■□□□□ 0.41
SEC13-203ENST00000383801 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
SEC13-203ENST00000383801 TRIM35Q9UPQ4 493 aa17.64■□□□□ 0.41
SEC13-203ENST00000383801 RRP7AQ9Y3A4 280 aaKnown RBP17.64■□□□□ 0.41
SEC13-203ENST00000383801 KIF1AQ12756 1690 aa17.64■□□□□ 0.41
SEC13-203ENST00000383801 PSME1Q06323 249 aa17.63■□□□□ 0.41
SEC13-203ENST00000383801 ESCO1Q5FWF5 840 aa17.63■□□□□ 0.41
SEC13-203ENST00000383801 ABTB2Q8N961 1025 aa17.63■□□□□ 0.41
SEC13-203ENST00000383801 KCNH5Q8NCM2 988 aa17.63■□□□□ 0.41
SEC13-203ENST00000383801 EIF4A2Q14240 407 aaKnown RBP17.62■□□□□ 0.41
SEC13-203ENST00000383801 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
SEC13-203ENST00000383801 MST1RQ04912 1400 aa17.61■□□□□ 0.41
SEC13-203ENST00000383801 RTL1A6NKG5 1358 aa17.61■□□□□ 0.41
SEC13-203ENST00000383801 MAP3K19Q56UN5 1328 aa17.61■□□□□ 0.41
SEC13-203ENST00000383801 KDM4FA0A1W2PPD8 638 aa17.61■□□□□ 0.41
SEC13-203ENST00000383801 ZNF428Q96B54 188 aa17.61■□□□□ 0.41
SEC13-203ENST00000383801 CCDC136Q96JN2 1154 aa17.61■□□□□ 0.41
SEC13-203ENST00000383801 RGPD1P0DJD0 1748 aa17.6■□□□□ 0.41
SEC13-203ENST00000383801 ARHGEF10O15013 1369 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms