RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 ADGRL2O95490 1459 aa25.74■■□□□ 1.71
NKX3-2-201ENST00000382438 CHD1LQ86WJ1 897 aa25.74■■□□□ 1.71
NKX3-2-201ENST00000382438 ADGBQ8N7X0 1667 aa25.74■■□□□ 1.71
NKX3-2-201ENST00000382438 ARHGAP31Q2M1Z3 1444 aa25.74■■□□□ 1.71
NKX3-2-201ENST00000382438 RIOK3O14730 519 aaKnown RBP25.73■■□□□ 1.71
NKX3-2-201ENST00000382438 SMC4Q9NTJ3 1288 aa25.73■■□□□ 1.71
NKX3-2-201ENST00000382438 ZDHHC9Q9Y397 364 aa25.73■■□□□ 1.71
NKX3-2-201ENST00000382438 A2MP01023 1474 aa25.73■■□□□ 1.71
NKX3-2-201ENST00000382438 BMP2KLQ5H9B9 411 aa25.72■■□□□ 1.71
NKX3-2-201ENST00000382438 EIF4G3O43432 1585 aaKnown RBP25.71■■□□□ 1.71
NKX3-2-201ENST00000382438 TSPY26PQ9H489 355 aa25.71■■□□□ 1.71
NKX3-2-201ENST00000382438 USP25Q9UHP3 1055 aa25.71■■□□□ 1.71
NKX3-2-201ENST00000382438 PRG4Q92954 1404 aaPredicted RBP25.71■■□□□ 1.71
NKX3-2-201ENST00000382438 FKBP5Q13451 457 aaPredicted RBP25.7■■□□□ 1.71
NKX3-2-201ENST00000382438 ANKRD45Q5TZF3 282 aa25.7■■□□□ 1.71
NKX3-2-201ENST00000382438 TSR2Q969E8 191 aaKnown RBP25.7■■□□□ 1.71
NKX3-2-201ENST00000382438 DDX19BQ9UMR2 479 aa25.7■■□□□ 1.71
NKX3-2-201ENST00000382438 TMEM57Q8N5G2 664 aa25.69■■□□□ 1.7
NKX3-2-201ENST00000382438 ANKRD7Q92527 254 aa25.68■■□□□ 1.7
NKX3-2-201ENST00000382438 CERS3Q8IU89 383 aa25.68■■□□□ 1.7
NKX3-2-201ENST00000382438 RUNDC1Q96C34 613 aa25.67■■□□□ 1.7
NKX3-2-201ENST00000382438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.67■■□□□ 1.7
NKX3-2-201ENST00000382438 FOXD4L6Q3SYB3 417 aaPredicted RBP25.65■■□□□ 1.7
NKX3-2-201ENST00000382438 TPRNQ4KMQ1 711 aa25.65■■□□□ 1.7
NKX3-2-201ENST00000382438 FOXD4L3Q6VB84 417 aaPredicted RBP25.65■■□□□ 1.7
NKX3-2-201ENST00000382438 WDR63Q8IWG1 891 aa25.65■■□□□ 1.7
NKX3-2-201ENST00000382438 OGFRQ9NZT2 677 aa25.65■■□□□ 1.7
NKX3-2-201ENST00000382438 SLFN14P0C7P3 912 aa25.64■■□□□ 1.7
NKX3-2-201ENST00000382438 NOB1Q9ULX3 412 aaKnown RBP25.64■■□□□ 1.7
NKX3-2-201ENST00000382438 ZBTB40Q9NUA8 1239 aa25.64■■□□□ 1.69
NKX3-2-201ENST00000382438 ADCY5O95622 1261 aa25.63■■□□□ 1.69
NKX3-2-201ENST00000382438 PLCB2Q00722 1185 aa25.63■■□□□ 1.69
NKX3-2-201ENST00000382438 SSH1Q8WYL5 1049 aa25.63■■□□□ 1.69
NKX3-2-201ENST00000382438 GPATCH8Q9UKJ3 1502 aaKnown RBP25.63■■□□□ 1.69
NKX3-2-201ENST00000382438 TSPY4P0CV99 314 aa25.63■■□□□ 1.69
NKX3-2-201ENST00000382438 TSPY10P0CW01 314 aa25.63■■□□□ 1.69
NKX3-2-201ENST00000382438 FEZ1Q99689 392 aa25.63■■□□□ 1.69
NKX3-2-201ENST00000382438 SPTLC3Q9NUV7 552 aa25.63■■□□□ 1.69
NKX3-2-201ENST00000382438 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
NKX3-2-201ENST00000382438 GRIN2AQ12879 1464 aa25.62■■□□□ 1.69
NKX3-2-201ENST00000382438 RABEP1Q15276 862 aa25.62■■□□□ 1.69
NKX3-2-201ENST00000382438 ATF7IPQ6VMQ6 1270 aa25.62■■□□□ 1.69
NKX3-2-201ENST00000382438 ABCC10Q5T3U5 1492 aa25.62■■□□□ 1.69
NKX3-2-201ENST00000382438 EXOSC9Q06265 439 aaKnown RBP25.61■■□□□ 1.69
NKX3-2-201ENST00000382438 CDCA8Q53HL2 280 aa25.61■■□□□ 1.69
NKX3-2-201ENST00000382438 CARD14Q9BXL6 1004 aa25.61■■□□□ 1.69
NKX3-2-201ENST00000382438 CHAF1AQ13111 956 aaPredicted RBP25.6■■□□□ 1.69
NKX3-2-201ENST00000382438 SHROOM2Q13796 1616 aa25.6■■□□□ 1.69
NKX3-2-201ENST00000382438 TRERF1Q96PN7 1200 aa25.6■■□□□ 1.69
NKX3-2-201ENST00000382438 DIAPH3Q9NSV4 1193 aa25.6■■□□□ 1.69
NKX3-2-201ENST00000382438 C9orf84Q5VXU9 1444 aa25.6■■□□□ 1.69
NKX3-2-201ENST00000382438 ERICH4A6NGS2 130 aa25.59■■□□□ 1.69
NKX3-2-201ENST00000382438 PHF23Q9BUL5 403 aaPredicted RBP25.59■■□□□ 1.69
NKX3-2-201ENST00000382438 C1orf115Q9H7X2 142 aa25.59■■□□□ 1.69
NKX3-2-201ENST00000382438 NAA30Q147X3 362 aaPredicted RBP25.58■■□□□ 1.69
NKX3-2-201ENST00000382438 CWC22Q9HCG8 908 aaKnown RBP25.58■■□□□ 1.69
NKX3-2-201ENST00000382438 PYCARDQ9ULZ3 195 aa25.58■■□□□ 1.69
NKX3-2-201ENST00000382438 MBD3O95983 291 aa25.58■■□□□ 1.68
NKX3-2-201ENST00000382438 GDPD2Q9HCC8 539 aa25.58■■□□□ 1.68
NKX3-2-201ENST00000382438 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.68
NKX3-2-201ENST00000382438 GABPB1Q06547 395 aaPredicted RBP25.57■■□□□ 1.68
NKX3-2-201ENST00000382438 NCBP1Q09161 790 aaKnown RBP25.57■■□□□ 1.68
NKX3-2-201ENST00000382438 RSPH4AQ5TD94 716 aa25.57■■□□□ 1.68
NKX3-2-201ENST00000382438 CTNNA3Q9UI47 895 aa25.57■■□□□ 1.68
NKX3-2-201ENST00000382438 ADCY10Q96PN6 1610 aa25.56■■□□□ 1.68
NKX3-2-201ENST00000382438 NPC1L1Q9UHC9 1359 aa25.56■■□□□ 1.68
NKX3-2-201ENST00000382438 PTPRGP23470 1445 aa25.56■■□□□ 1.68
NKX3-2-201ENST00000382438 NUP153P49790 1475 aaKnown RBP25.56■■□□□ 1.68
NKX3-2-201ENST00000382438 ITSN2Q9NZM3 1697 aa25.56■■□□□ 1.68
NKX3-2-201ENST00000382438 HNRNPMP52272 730 aaKnown RBP eCLIP25.55■■□□□ 1.68
NKX3-2-201ENST00000382438 PLA2R1Q13018 1463 aa25.55■■□□□ 1.68
NKX3-2-201ENST00000382438 CTIFO43310 598 aaKnown RBP25.55■■□□□ 1.68
NKX3-2-201ENST00000382438 CDC45O75419 566 aa25.55■■□□□ 1.68
NKX3-2-201ENST00000382438 AEBP1Q8IUX7 1158 aa25.55■■□□□ 1.68
NKX3-2-201ENST00000382438 TIGD1Q96MW7 591 aa25.55■■□□□ 1.68
NKX3-2-201ENST00000382438 CAPN2P17655 700 aa25.55■■□□□ 1.68
NKX3-2-201ENST00000382438 DNAJC2Q99543 621 aaKnown RBP25.55■■□□□ 1.68
NKX3-2-201ENST00000382438 GADD45BO75293 160 aaPredicted RBP25.54■■□□□ 1.68
NKX3-2-201ENST00000382438 CROCC2H7BZ55 1655 aa25.54■■□□□ 1.68
NKX3-2-201ENST00000382438 LAMC1P11047 1609 aa25.54■■□□□ 1.68
NKX3-2-201ENST00000382438 ZBTB9Q96C00 473 aa25.53■■□□□ 1.68
NKX3-2-201ENST00000382438 CCDC66A2RUB6 948 aa25.53■■□□□ 1.68
NKX3-2-201ENST00000382438 TERF2Q15554 542 aa25.52■■□□□ 1.68
NKX3-2-201ENST00000382438 KIAA1524Q8TCG1 905 aa25.52■■□□□ 1.68
NKX3-2-201ENST00000382438 TRIM6-TRIM34B2RNG4 842 aa25.52■■□□□ 1.68
NKX3-2-201ENST00000382438 HCLS1P14317 486 aaPredicted RBP25.52■■□□□ 1.68
NKX3-2-201ENST00000382438 TRIM34Q9BYJ4 488 aa25.52■■□□□ 1.68
NKX3-2-201ENST00000382438 KCNF1Q9H3M0 494 aa25.51■■□□□ 1.67
NKX3-2-201ENST00000382438 SYNMO15061 1565 aa25.51■■□□□ 1.67
NKX3-2-201ENST00000382438 SPC24Q8NBT2 197 aa25.51■■□□□ 1.67
NKX3-2-201ENST00000382438 ZFP91Q96JP5 570 aaPredicted RBP25.51■■□□□ 1.67
NKX3-2-201ENST00000382438 POLR3AO14802 1390 aaPredicted RBP25.5■■□□□ 1.67
NKX3-2-201ENST00000382438 DDX41Q9UJV9 622 aaKnown RBP25.5■■□□□ 1.67
NKX3-2-201ENST00000382438 SMARCA5O60264 1052 aaPredicted RBP25.5■■□□□ 1.67
NKX3-2-201ENST00000382438 GSPT1P15170 499 aaKnown RBP25.5■■□□□ 1.67
NKX3-2-201ENST00000382438 USP26Q9BXU7 913 aa25.5■■□□□ 1.67
NKX3-2-201ENST00000382438 TROQ12816 1431 aaPredicted RBP25.49■■□□□ 1.67
NKX3-2-201ENST00000382438 ST18O60284 1047 aa25.48■■□□□ 1.67
NKX3-2-201ENST00000382438 SYAP1Q96A49 352 aaPredicted RBP25.48■■□□□ 1.67
NKX3-2-201ENST00000382438 IRX3P78415 501 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms