RNA–Protein interactions for RNA: ENST00000382041.7

NIN-203, Transcript of ninein, humanhuman

TSL 1 (best) BASIC

Gene NIN, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-203ENST00000382041 RTEL1-TNFRSF6BF6WH68 1400 aa18.78■□□□□ 0.6
NIN-203ENST00000382041 TATP17735 454 aaPredicted RBP18.78■□□□□ 0.6
NIN-203ENST00000382041 SIL1Q9H173 461 aa18.78■□□□□ 0.6
NIN-203ENST00000382041 MYL6BP14649 208 aa18.78■□□□□ 0.6
NIN-203ENST00000382041 TIAM1Q13009 1591 aa18.78■□□□□ 0.6
NIN-203ENST00000382041 ZNF530Q6P9A1 599 aaPredicted RBP18.77■□□□□ 0.6
NIN-203ENST00000382041 SLC52A1Q9NWF4 448 aa18.77■□□□□ 0.6
NIN-203ENST00000382041 HECW1Q76N89 1606 aa18.77■□□□□ 0.6
NIN-203ENST00000382041 CNTROBQ8N137 903 aa18.77■□□□□ 0.6
NIN-203ENST00000382041 FANCIQ9NVI1 1328 aa18.77■□□□□ 0.6
NIN-203ENST00000382041 MAP4K4O95819 1239 aaPredicted RBP18.76■□□□□ 0.59
NIN-203ENST00000382041 KIF6Q6ZMV9 814 aa18.76■□□□□ 0.59
NIN-203ENST00000382041 PNISRQ8TF01 805 aaKnown RBP18.75■□□□□ 0.59
NIN-203ENST00000382041 SMG6Q86US8 1419 aaKnown RBP18.75■□□□□ 0.59
NIN-203ENST00000382041 CABP4P57796 275 aa18.75■□□□□ 0.59
NIN-203ENST00000382041 PLEKHH2Q8IVE3 1493 aa18.75■□□□□ 0.59
NIN-203ENST00000382041 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
NIN-203ENST00000382041 WAPLQ7Z5K2 1190 aa18.74■□□□□ 0.59
NIN-203ENST00000382041 GNAI2P04899 355 aa18.74■□□□□ 0.59
NIN-203ENST00000382041 ZNF692Q9BU19 519 aaPredicted RBP18.74■□□□□ 0.59
NIN-203ENST00000382041 TPM2P07951 284 aa18.74■□□□□ 0.59
NIN-203ENST00000382041 STK11IPQ8N1F8 1099 aa18.74■□□□□ 0.59
NIN-203ENST00000382041 NINLQ9Y2I6 1382 aa18.73■□□□□ 0.59
NIN-203ENST00000382041 TPM1P09493 284 aa18.73■□□□□ 0.59
NIN-203ENST00000382041 ZC3H6P61129 1189 aaKnown RBP18.73■□□□□ 0.59
NIN-203ENST00000382041 NUCB2P80303 420 aa18.72■□□□□ 0.59
NIN-203ENST00000382041 GOLGA6L1Q8N7Z2 621 aa18.72■□□□□ 0.59
NIN-203ENST00000382041 NEK4P51957 841 aa18.72■□□□□ 0.59
NIN-203ENST00000382041 ANKLE2Q86XL3 938 aa18.72■□□□□ 0.59
NIN-203ENST00000382041 MIS18AQ9NYP9 233 aa18.72■□□□□ 0.59
NIN-203ENST00000382041 SAFBQ15424 915 aaKnown RBP eCLIP18.71■□□□□ 0.59
NIN-203ENST00000382041 WDR97A6NE52 1622 aa18.71■□□□□ 0.59
NIN-203ENST00000382041 RRP12Q5JTH9 1297 aaKnown RBP18.71■□□□□ 0.59
NIN-203ENST00000382041 CNNM1Q9NRU3 951 aa18.71■□□□□ 0.59
NIN-203ENST00000382041 ATP2B1P20020 1258 aa18.71■□□□□ 0.59
NIN-203ENST00000382041 EPRSP07814 1512 aaKnown RBP18.71■□□□□ 0.59
NIN-203ENST00000382041 THUMPD2Q9BTF0 503 aaKnown RBP18.7■□□□□ 0.58
NIN-203ENST00000382041 BCL11BQ9C0K0 894 aaPredicted RBP18.7■□□□□ 0.58
NIN-203ENST00000382041 SUPT6HQ7KZ85 1726 aaKnown RBP18.7■□□□□ 0.58
NIN-203ENST00000382041 PIP4K2BP78356 416 aa18.7■□□□□ 0.58
NIN-203ENST00000382041 SASS6Q6UVJ0 657 aa18.7■□□□□ 0.58
NIN-203ENST00000382041 AAMPQ13685 434 aa18.7■□□□□ 0.58
NIN-203ENST00000382041 NFKBIBQ15653 356 aa18.69■□□□□ 0.58
NIN-203ENST00000382041 CCDC73Q6ZRK6 1079 aa18.69■□□□□ 0.58
NIN-203ENST00000382041 PRDM11Q9NQV5 511 aa18.69■□□□□ 0.58
NIN-203ENST00000382041 TBC1D2BQ9UPU7 963 aa18.69■□□□□ 0.58
NIN-203ENST00000382041 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
NIN-203ENST00000382041 NUDT16Q96DE0 195 aaKnown RBP18.68■□□□□ 0.58
NIN-203ENST00000382041 RNF214Q8ND24 703 aa18.68■□□□□ 0.58
NIN-203ENST00000382041 NSD3Q9BZ95 1437 aa18.68■□□□□ 0.58
NIN-203ENST00000382041 CCDC47Q96A33 483 aaKnown RBP18.68■□□□□ 0.58
NIN-203ENST00000382041 PDE3AQ14432 1141 aa18.67■□□□□ 0.58
NIN-203ENST00000382041 PPP1R1BQ9UD71 204 aaPredicted RBP18.67■□□□□ 0.58
NIN-203ENST00000382041 HMGXB3Q12766 1538 aa18.67■□□□□ 0.58
NIN-203ENST00000382041 PSMA5P28066 241 aa18.67■□□□□ 0.58
NIN-203ENST00000382041 IKQ13123 557 aaPredicted RBP18.67■□□□□ 0.58
NIN-203ENST00000382041 TTC39AQ5SRH9 613 aa18.67■□□□□ 0.58
NIN-203ENST00000382041 ATF7IPQ6VMQ6 1270 aa18.67■□□□□ 0.58
NIN-203ENST00000382041 SRCIN1Q9C0H9 1055 aa18.67■□□□□ 0.58
NIN-203ENST00000382041 PLB1Q6P1J6 1458 aa18.66■□□□□ 0.58
NIN-203ENST00000382041 CCDC85AQ96PX6 553 aaPredicted RBP18.66■□□□□ 0.58
NIN-203ENST00000382041 NAIPQ13075 1403 aa18.66■□□□□ 0.58
NIN-203ENST00000382041 DCTN1Q14203 1278 aa18.66■□□□□ 0.58
NIN-203ENST00000382041 CCDC43Q96MW1 224 aaKnown RBP18.66■□□□□ 0.58
NIN-203ENST00000382041 BTBD11A6QL63 1104 aa18.65■□□□□ 0.58
NIN-203ENST00000382041 HOOK1Q9UJC3 728 aaKnown RBP18.65■□□□□ 0.58
NIN-203ENST00000382041 GCC1Q96CN9 775 aa18.65■□□□□ 0.58
NIN-203ENST00000382041 CEBPZQ03701 1054 aaKnown RBP18.65■□□□□ 0.58
NIN-203ENST00000382041 SPG7Q9UQ90 795 aa18.65■□□□□ 0.58
NIN-203ENST00000382041 HOMER1Q86YM7 354 aa18.65■□□□□ 0.58
NIN-203ENST00000382041 ANKRD20A12PQ8NF67 263 aa18.65■□□□□ 0.58
NIN-203ENST00000382041 STK3Q13188 491 aa18.65■□□□□ 0.58
NIN-203ENST00000382041 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.64■□□□□ 0.58
NIN-203ENST00000382041 MCM10Q7L590 875 aa18.64■□□□□ 0.57
NIN-203ENST00000382041 WDR63Q8IWG1 891 aa18.64■□□□□ 0.57
NIN-203ENST00000382041 LRRCC1Q9C099 1032 aa18.64■□□□□ 0.57
NIN-203ENST00000382041 KIAA0586Q9BVV6 1533 aa18.64■□□□□ 0.57
NIN-203ENST00000382041 CCT4P50991 539 aaKnown RBP18.63■□□□□ 0.57
NIN-203ENST00000382041 IL1RAPL2Q9NP60 686 aa18.63■□□□□ 0.57
NIN-203ENST00000382041 USHBP1Q8N6Y0 703 aa18.63■□□□□ 0.57
NIN-203ENST00000382041 CWC22Q9HCG8 908 aaKnown RBP18.63■□□□□ 0.57
NIN-203ENST00000382041 MVPQ14764 893 aaKnown RBP18.63■□□□□ 0.57
NIN-203ENST00000382041 ANKRD30BQ9BXX2 1392 aa18.63■□□□□ 0.57
NIN-203ENST00000382041 CCDC158Q5M9N0 1113 aa18.63■□□□□ 0.57
NIN-203ENST00000382041 SPINK5Q9NQ38 1064 aaPredicted RBP18.63■□□□□ 0.57
NIN-203ENST00000382041 C11orf95C9JLR9 678 aaPredicted RBP18.63■□□□□ 0.57
NIN-203ENST00000382041 IPO7O95373 1038 aaKnown RBP18.63■□□□□ 0.57
NIN-203ENST00000382041 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
NIN-203ENST00000382041 PCF11O94913 1555 aaKnown RBP18.62■□□□□ 0.57
NIN-203ENST00000382041 RPGRIP1LQ68CZ1 1315 aa18.62■□□□□ 0.57
NIN-203ENST00000382041 SDF4Q9BRK5 362 aa18.62■□□□□ 0.57
NIN-203ENST00000382041 SRGAP3O43295 1099 aa18.62■□□□□ 0.57
NIN-203ENST00000382041 CCDC61Q9Y6R9 512 aa18.62■□□□□ 0.57
NIN-203ENST00000382041 ATAD2Q6PL18 1390 aa18.62■□□□□ 0.57
NIN-203ENST00000382041 ERC1Q8IUD2 1116 aa18.61■□□□□ 0.57
NIN-203ENST00000382041 CAVIN1Q6NZI2 390 aaKnown RBP18.61■□□□□ 0.57
NIN-203ENST00000382041 TMPOP42166 694 aaKnown RBP18.61■□□□□ 0.57
NIN-203ENST00000382041 MAGI1Q96QZ7 1491 aaPredicted RBP18.61■□□□□ 0.57
NIN-203ENST00000382041 CEBPAP49715 358 aaPredicted RBP18.6■□□□□ 0.57
NIN-203ENST00000382041 FKBP4Q02790 459 aaKnown RBP eCLIP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms