RNA–Protein interactions for RNA: ENST00000381756.9

GGA1-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene GGA1, Length 2,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-204ENST00000381756 ITPRIPQ8IWB1 547 aa33.29■■■□□ 2.92
GGA1-204ENST00000381756 CFAP70Q5T0N1 1121 aa33.29■■■□□ 2.92
GGA1-204ENST00000381756 REREQ9P2R6 1566 aa33.29■■■□□ 2.92
GGA1-204ENST00000381756 NSD2O96028 1365 aa33.28■■■□□ 2.92
GGA1-204ENST00000381756 VWDEQ8N2E2 1590 aa33.28■■■□□ 2.92
GGA1-204ENST00000381756 IL16Q14005 1332 aa33.27■■■□□ 2.92
GGA1-204ENST00000381756 NOS1P29475 1434 aa33.27■■■□□ 2.92
GGA1-204ENST00000381756 MTHFSP49914 203 aa33.26■■■□□ 2.91
GGA1-204ENST00000381756 ZNF500O60304 480 aaPredicted RBP33.25■■■□□ 2.91
GGA1-204ENST00000381756 CHD1LQ86WJ1 897 aa33.25■■■□□ 2.91
GGA1-204ENST00000381756 IFT172Q9UG01 1749 aa33.25■■■□□ 2.91
GGA1-204ENST00000381756 IPO8O15397 1037 aaKnown RBP33.25■■■□□ 2.91
GGA1-204ENST00000381756 MTERF4Q7Z6M4 381 aaKnown RBP33.25■■■□□ 2.91
GGA1-204ENST00000381756 INO80Q9ULG1 1556 aaPredicted RBP33.24■■■□□ 2.91
GGA1-204ENST00000381756 SSH1Q8WYL5 1049 aa33.23■■■□□ 2.91
GGA1-204ENST00000381756 EFCAB2Q5VUJ9 269 aa33.22■■■□□ 2.91
GGA1-204ENST00000381756 NOL7Q9UMY1 257 aaKnown RBP33.22■■■□□ 2.91
GGA1-204ENST00000381756 DDX49Q9Y6V7 483 aaKnown RBP33.22■■■□□ 2.91
GGA1-204ENST00000381756 RIPK4P57078 832 aa33.22■■■□□ 2.91
GGA1-204ENST00000381756 ZC3H13Q5T200 1668 aaKnown RBP33.21■■■□□ 2.91
GGA1-204ENST00000381756 BAG4O95429 457 aaKnown RBP33.2■■■□□ 2.9
GGA1-204ENST00000381756 EXOSC9Q06265 439 aaKnown RBP33.2■■■□□ 2.9
GGA1-204ENST00000381756 PDLIM2Q96JY6 352 aa33.19■■■□□ 2.9
GGA1-204ENST00000381756 PUS7Q96PZ0 661 aaKnown RBP33.19■■■□□ 2.9
GGA1-204ENST00000381756 CHMP4BQ9H444 224 aaKnown RBP33.19■■■□□ 2.9
GGA1-204ENST00000381756 MCM5P33992 734 aa33.19■■■□□ 2.9
GGA1-204ENST00000381756 TMEM57Q8N5G2 664 aa33.18■■■□□ 2.9
GGA1-204ENST00000381756 GCC1Q96CN9 775 aa33.18■■■□□ 2.9
GGA1-204ENST00000381756 CFAP44Q96MT7 982 aa33.18■■■□□ 2.9
GGA1-204ENST00000381756 ADGRF5Q8IZF2 1346 aa33.18■■■□□ 2.9
GGA1-204ENST00000381756 SSFA2P28290 1259 aa33.17■■■□□ 2.9
GGA1-204ENST00000381756 NOB1Q9ULX3 412 aaKnown RBP33.17■■■□□ 2.9
GGA1-204ENST00000381756 ZFYVE16Q7Z3T8 1539 aa33.17■■■□□ 2.9
GGA1-204ENST00000381756 TRAPPC8Q9Y2L5 1435 aa33.17■■■□□ 2.9
GGA1-204ENST00000381756 NUCB2P80303 420 aa33.16■■■□□ 2.9
GGA1-204ENST00000381756 KIF1BO60333 1816 aa33.16■■■□□ 2.9
GGA1-204ENST00000381756 U2AF1L5P0DN76 240 aaPredicted RBP33.16■■■□□ 2.9
GGA1-204ENST00000381756 U2AF1Q01081 240 aaKnown RBP eCLIP33.16■■■□□ 2.9
GGA1-204ENST00000381756 CSPP1Q1MSJ5 1256 aa33.16■■■□□ 2.9
GGA1-204ENST00000381756 ALDH1L2Q3SY69 923 aa33.15■■■□□ 2.9
GGA1-204ENST00000381756 LNPKQ9C0E8 428 aa33.15■■■□□ 2.9
GGA1-204ENST00000381756 TNNT2P45379 298 aaPredicted RBP33.14■■■□□ 2.9
GGA1-204ENST00000381756 TSR2Q969E8 191 aaKnown RBP33.14■■■□□ 2.9
GGA1-204ENST00000381756 MED14O60244 1454 aa33.14■■■□□ 2.9
GGA1-204ENST00000381756 CD2BP2O95400 341 aaKnown RBP33.13■■■□□ 2.89
GGA1-204ENST00000381756 SPAG9O60271 1321 aaKnown RBP33.13■■■□□ 2.89
GGA1-204ENST00000381756 BRPF1P55201 1214 aaPredicted RBP33.12■■■□□ 2.89
GGA1-204ENST00000381756 GAS2L2Q8NHY3 880 aa33.12■■■□□ 2.89
GGA1-204ENST00000381756 ZNF428Q96B54 188 aa33.12■■■□□ 2.89
GGA1-204ENST00000381756 SLC12A5Q9H2X9 1139 aa33.11■■■□□ 2.89
GGA1-204ENST00000381756 QRICH2Q9H0J4 1663 aa33.1■■■□□ 2.89
GGA1-204ENST00000381756 CD109Q6YHK3 1445 aa33.1■■■□□ 2.89
GGA1-204ENST00000381756 TMPOP42166 694 aaKnown RBP33.09■■■□□ 2.89
GGA1-204ENST00000381756 TBC1D9Q6ZT07 1266 aa33.09■■■□□ 2.89
GGA1-204ENST00000381756 PLEKHF1Q96S99 279 aa33.09■■■□□ 2.89
GGA1-204ENST00000381756 DYNC1I1O14576 645 aa33.08■■■□□ 2.89
GGA1-204ENST00000381756 PRDM4Q9UKN5 801 aa33.08■■■□□ 2.89
GGA1-204ENST00000381756 ARAP3Q8WWN8 1544 aa33.08■■■□□ 2.89
GGA1-204ENST00000381756 RABEP1Q15276 862 aa33.08■■■□□ 2.89
GGA1-204ENST00000381756 ZSCAN23Q3MJ62 389 aa33.07■■■□□ 2.88
GGA1-204ENST00000381756 TRIM35Q9UPQ4 493 aa33.07■■■□□ 2.88
GGA1-204ENST00000381756 CYP2E1P05181 493 aaPredicted RBP33.07■■■□□ 2.88
GGA1-204ENST00000381756 R3HCC1Q9Y3T6 440 aaKnown RBP33.06■■■□□ 2.88
GGA1-204ENST00000381756 ANKRD36BQ8N2N9 1353 aa33.06■■■□□ 2.88
GGA1-204ENST00000381756 ZKSCAN5Q9Y2L8 839 aa33.05■■■□□ 2.88
GGA1-204ENST00000381756 CWC22Q9HCG8 908 aaKnown RBP33.04■■■□□ 2.88
GGA1-204ENST00000381756 CDC45O75419 566 aa33.04■■■□□ 2.88
GGA1-204ENST00000381756 SMAP1Q8IYB5 467 aaPredicted RBP33.04■■■□□ 2.88
GGA1-204ENST00000381756 LMBRD1Q9NUN5 540 aa33.04■■■□□ 2.88
GGA1-204ENST00000381756 FANCAO15360 1455 aa33.03■■■□□ 2.88
GGA1-204ENST00000381756 FOXD4L1Q9NU39 408 aa33.03■■■□□ 2.88
GGA1-204ENST00000381756 PPRC1Q5VV67 1664 aaKnown RBP33.03■■■□□ 2.88
GGA1-204ENST00000381756 EIF2AK3Q9NZJ5 1116 aaKnown RBP33.02■■■□□ 2.88
GGA1-204ENST00000381756 PIK3R4Q99570 1358 aa33.01■■■□□ 2.88
GGA1-204ENST00000381756 PPIP5K1Q6PFW1 1433 aa33.01■■■□□ 2.87
GGA1-204ENST00000381756 UQCRHLA0A096LP55 91 aa33■■■□□ 2.87
GGA1-204ENST00000381756 UQCRHP07919 91 aa33■■■□□ 2.87
GGA1-204ENST00000381756 RBM10P98175 930 aaKnown RBP33■■■□□ 2.87
GGA1-204ENST00000381756 ANKRD45Q5TZF3 282 aa33■■■□□ 2.87
GGA1-204ENST00000381756 FAM13BQ9NYF5 915 aa33■■■□□ 2.87
GGA1-204ENST00000381756 CAVIN1Q6NZI2 390 aaKnown RBP32.99■■■□□ 2.87
GGA1-204ENST00000381756 MCTP1Q6DN14 999 aa32.99■■■□□ 2.87
GGA1-204ENST00000381756 ARHGAP45Q92619 1136 aa32.99■■■□□ 2.87
GGA1-204ENST00000381756 ADGRB1O14514 1584 aa32.98■■■□□ 2.87
GGA1-204ENST00000381756 ADGRB3O60242 1522 aa32.98■■■□□ 2.87
GGA1-204ENST00000381756 RBSNQ9H1K0 784 aa32.98■■■□□ 2.87
GGA1-204ENST00000381756 COL3A1P02461 1466 aaPredicted RBP32.98■■■□□ 2.87
GGA1-204ENST00000381756 RBM42Q9BTD8 480 aaKnown RBP32.98■■■□□ 2.87
GGA1-204ENST00000381756 CCDC39Q9UFE4 941 aa32.98■■■□□ 2.87
GGA1-204ENST00000381756 MROH2AA6NES4 1674 aa32.97■■■□□ 2.87
GGA1-204ENST00000381756 EFCAB6Q5THR3 1501 aa32.97■■■□□ 2.87
GGA1-204ENST00000381756 UGGT1Q9NYU2 1555 aa32.97■■■□□ 2.87
GGA1-204ENST00000381756 ZBTB7BO15156 539 aaPredicted RBP32.96■■■□□ 2.87
GGA1-204ENST00000381756 C14orf93Q9H972 538 aaKnown RBP32.96■■■□□ 2.87
GGA1-204ENST00000381756 SASS6Q6UVJ0 657 aa32.95■■■□□ 2.87
GGA1-204ENST00000381756 MROH1Q8NDA8 1641 aa32.94■■■□□ 2.86
GGA1-204ENST00000381756 PTCH1Q13635 1447 aa32.93■■■□□ 2.86
GGA1-204ENST00000381756 ATP7AQ04656 1500 aa32.92■■■□□ 2.86
GGA1-204ENST00000381756 LRSAM1Q6UWE0 723 aa32.92■■■□□ 2.86
GGA1-204ENST00000381756 PRIM1P49642 420 aaKnown RBP32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms