RNA–Protein interactions for RNA: ENST00000381124.9

H2AFV-205, Transcript of H2A histone family member V, humanhuman

TSL 3 BASIC

Gene H2AFV, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-205ENST00000381124 SLIT2O94813 1529 aa38.36■■■■□ 3.73
H2AFV-205ENST00000381124 ALS2Q96Q42 1657 aa38.36■■■■□ 3.73
H2AFV-205ENST00000381124 PPIP5K1Q6PFW1 1433 aa38.35■■■■□ 3.73
H2AFV-205ENST00000381124 CARD11Q9BXL7 1154 aa38.34■■■■□ 3.73
H2AFV-205ENST00000381124 ABCA3Q99758 1704 aa38.34■■■■□ 3.73
H2AFV-205ENST00000381124 EVC2Q86UK5 1308 aa38.34■■■■□ 3.73
H2AFV-205ENST00000381124 GJD4Q96KN9 370 aaPredicted RBP38.31■■■■□ 3.72
H2AFV-205ENST00000381124 FAM83GA6ND36 823 aa38.28■■■■□ 3.72
H2AFV-205ENST00000381124 NUTM2GQ5VZR2 741 aa38.28■■■■□ 3.72
H2AFV-205ENST00000381124 UPF1Q92900 1129 aaKnown RBP eCLIP38.27■■■■□ 3.72
H2AFV-205ENST00000381124 CABP1Q9NZU7 370 aa38.27■■■■□ 3.72
H2AFV-205ENST00000381124 RALGAPBQ86X10 1494 aa38.26■■■■□ 3.72
H2AFV-205ENST00000381124 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.25■■■■□ 3.71
H2AFV-205ENST00000381124 CCDC9Q9Y3X0 531 aaKnown RBP38.23■■■■□ 3.71
H2AFV-205ENST00000381124 ABTB2Q8N961 1025 aa38.22■■■■□ 3.71
H2AFV-205ENST00000381124 PLCH1Q4KWH8 1693 aa38.21■■■■□ 3.71
H2AFV-205ENST00000381124 VPS72Q15906 364 aa38.2■■■■□ 3.71
H2AFV-205ENST00000381124 PRDM11Q9NQV5 511 aa38.19■■■■□ 3.7
H2AFV-205ENST00000381124 BTG4Q9NY30 223 aa38.19■■■■□ 3.7
H2AFV-205ENST00000381124 NWD2Q9ULI1 1742 aa38.17■■■■□ 3.7
H2AFV-205ENST00000381124 CRYBG1Q9Y4K1 1723 aa38.15■■■■□ 3.7
H2AFV-205ENST00000381124 GLI3P10071 1580 aa38.14■■■■□ 3.7
H2AFV-205ENST00000381124 ZC3H6P61129 1189 aaKnown RBP38.13■■■■□ 3.69
H2AFV-205ENST00000381124 ATAD2Q6PL18 1390 aa38.13■■■■□ 3.69
H2AFV-205ENST00000381124 COL14A1Q05707 1796 aaKnown RBP38.13■■■■□ 3.69
H2AFV-205ENST00000381124 USP6P35125 1406 aa38.12■■■■□ 3.69
H2AFV-205ENST00000381124 BRD4O60885 1362 aaPredicted RBP38.12■■■■□ 3.69
H2AFV-205ENST00000381124 KIAA0232Q92628 1395 aa38.12■■■■□ 3.69
H2AFV-205ENST00000381124 SBNO2Q9Y2G9 1366 aa38.12■■■■□ 3.69
H2AFV-205ENST00000381124 NLRP13Q86W25 1043 aa38.11■■■■□ 3.69
H2AFV-205ENST00000381124 CHRNA2Q15822 529 aa38.09■■■■□ 3.69
H2AFV-205ENST00000381124 PHRF1Q9P1Y6 1649 aaKnown RBP38.09■■■■□ 3.69
H2AFV-205ENST00000381124 CLSPNQ9HAW4 1339 aa38.08■■■■□ 3.69
H2AFV-205ENST00000381124 CCER1Q8TC90 406 aaPredicted RBP38.06■■■■□ 3.68
H2AFV-205ENST00000381124 USP19O94966 1318 aa38.05■■■■□ 3.68
H2AFV-205ENST00000381124 NRAPQ86VF7 1730 aa38.04■■■■□ 3.68
H2AFV-205ENST00000381124 SEPT12Q8IYM1 358 aa38.04■■■■□ 3.68
H2AFV-205ENST00000381124 ZNF692Q9BU19 519 aaPredicted RBP38.04■■■■□ 3.68
H2AFV-205ENST00000381124 A0A0G2JS52 829 aa38.03■■■■□ 3.68
H2AFV-205ENST00000381124 NLRP6P59044 892 aa38.03■■■■□ 3.68
H2AFV-205ENST00000381124 MYT1Q01538 1121 aa38.03■■■■□ 3.68
H2AFV-205ENST00000381124 GCP02774 474 aa38■■■■□ 3.67
H2AFV-205ENST00000381124 STRN4Q9NRL3 753 aa38■■■■□ 3.67
H2AFV-205ENST00000381124 NRKQ7Z2Y5 1582 aa38■■■■□ 3.67
H2AFV-205ENST00000381124 SSH2Q76I76 1423 aa37.98■■■■□ 3.67
H2AFV-205ENST00000381124 FAM98CQ17RN3 349 aaKnown RBP37.98■■■■□ 3.67
H2AFV-205ENST00000381124 TMC1Q8TDI8 760 aa37.98■■■■□ 3.67
H2AFV-205ENST00000381124 TTC21BQ7Z4L5 1316 aa37.97■■■■□ 3.67
H2AFV-205ENST00000381124 ST20-MTHFSA0A0A6YYL1 179 aa37.97■■■■□ 3.67
H2AFV-205ENST00000381124 ONECUT3O60422 494 aaPredicted RBP37.96■■■■□ 3.67
H2AFV-205ENST00000381124 KTN1Q86UP2 1357 aaKnown RBP37.95■■■■□ 3.67
H2AFV-205ENST00000381124 SPATA31A5Q5VU36 1347 aa37.95■■■■□ 3.67
H2AFV-205ENST00000381124 SPATA31A7Q8IWB4 1347 aa37.95■■■■□ 3.67
H2AFV-205ENST00000381124 ZBTB7CA1YPR0 619 aa37.95■■■■□ 3.67
H2AFV-205ENST00000381124 CPDO75976 1380 aa37.94■■■■□ 3.66
H2AFV-205ENST00000381124 EVA1CP58658 441 aa37.94■■■■□ 3.66
H2AFV-205ENST00000381124 CPSF1Q10570 1443 aaKnown RBP37.94■■■■□ 3.66
H2AFV-205ENST00000381124 TIMELESSQ9UNS1 1208 aa37.93■■■■□ 3.66
H2AFV-205ENST00000381124 AKAP12Q02952 1782 aa37.91■■■■□ 3.66
H2AFV-205ENST00000381124 TTC21AQ8NDW8 1320 aa37.9■■■■□ 3.66
H2AFV-205ENST00000381124 TESK2Q96S53 571 aa37.9■■■■□ 3.66
H2AFV-205ENST00000381124 KRT27Q7Z3Y8 459 aa37.89■■■■□ 3.66
H2AFV-205ENST00000381124 PIK3C2AO00443 1686 aa37.88■■■■□ 3.66
H2AFV-205ENST00000381124 SLC12A5Q9H2X9 1139 aa37.88■■■■□ 3.65
H2AFV-205ENST00000381124 HDGFL2Q7Z4V5 671 aaPredicted RBP37.87■■■■□ 3.65
H2AFV-205ENST00000381124 BRWD3Q6RI45 1802 aa37.87■■■■□ 3.65
H2AFV-205ENST00000381124 USP47Q96K76 1375 aa37.86■■■■□ 3.65
H2AFV-205ENST00000381124 SLC24A1O60721 1099 aa37.86■■■■□ 3.65
H2AFV-205ENST00000381124 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.86■■■■□ 3.65
H2AFV-205ENST00000381124 SLIT3O75094 1523 aa37.86■■■■□ 3.65
H2AFV-205ENST00000381124 SPATA31A1Q5TZJ5 1347 aa37.86■■■■□ 3.65
H2AFV-205ENST00000381124 PUS7Q96PZ0 661 aaKnown RBP37.85■■■■□ 3.65
H2AFV-205ENST00000381124 USP35Q9P2H5 1018 aa37.85■■■■□ 3.65
H2AFV-205ENST00000381124 CAMTA1Q9Y6Y1 1673 aa37.85■■■■□ 3.65
H2AFV-205ENST00000381124 SOX12O15370 315 aa37.84■■■■□ 3.65
H2AFV-205ENST00000381124 CCDC125Q86Z20 511 aa37.83■■■■□ 3.65
H2AFV-205ENST00000381124 TERF2IPQ9NYB0 399 aa37.82■■■■□ 3.64
H2AFV-205ENST00000381124 CD163L1Q9NR16 1453 aa37.82■■■■□ 3.64
H2AFV-205ENST00000381124 LARP1Q6PKG0 1096 aaKnown RBP37.81■■■■□ 3.64
H2AFV-205ENST00000381124 KCNH5Q8NCM2 988 aa37.81■■■■□ 3.64
H2AFV-205ENST00000381124 LMO7Q8WWI1 1683 aa37.79■■■■□ 3.64
H2AFV-205ENST00000381124 MON2Q7Z3U7 1717 aa37.79■■■■□ 3.64
H2AFV-205ENST00000381124 AATKQ6ZMQ8 1374 aa37.77■■■■□ 3.64
H2AFV-205ENST00000381124 TMF1P82094 1093 aa37.76■■■■□ 3.64
H2AFV-205ENST00000381124 NME9Q86XW9 330 aa37.76■■■■□ 3.64
H2AFV-205ENST00000381124 ZRANB1Q9UGI0 708 aa37.76■■■■□ 3.64
H2AFV-205ENST00000381124 A0A1W2PP64 1363 aa37.75■■■■□ 3.63
H2AFV-205ENST00000381124 BLMP54132 1417 aaPredicted RBP37.75■■■■□ 3.63
H2AFV-205ENST00000381124 COL5A2P05997 1499 aaPredicted RBP37.74■■■■□ 3.63
H2AFV-205ENST00000381124 SF3B2Q13435 895 aaKnown RBP37.73■■■■□ 3.63
H2AFV-205ENST00000381124 EDC4Q6P2E9 1401 aaKnown RBP37.72■■■■□ 3.63
H2AFV-205ENST00000381124 NINLQ9Y2I6 1382 aa37.72■■■■□ 3.63
H2AFV-205ENST00000381124 ARHGEF25Q86VW2 580 aa37.72■■■■□ 3.63
H2AFV-205ENST00000381124 TCP11L2Q8N4U5 519 aa37.72■■■■□ 3.63
H2AFV-205ENST00000381124 THSD7AQ9UPZ6 1657 aa37.72■■■■□ 3.63
H2AFV-205ENST00000381124 FAM182BQ5T319 152 aa37.7■■■■□ 3.63
H2AFV-205ENST00000381124 BARGINQ6ZT62 677 aa37.7■■■■□ 3.63
H2AFV-205ENST00000381124 USP31Q70CQ4 1352 aa37.69■■■■□ 3.62
H2AFV-205ENST00000381124 EP400Q96L91 3159 aa37.68■■■■□ 3.62
H2AFV-205ENST00000381124 AXIN2Q9Y2T1 843 aa37.66■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms