RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 C20orf194Q5TEA3 1177 aa17.32■□□□□ 0.36
LCMT1-201ENST00000380962 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
LCMT1-201ENST00000380962 IL16Q14005 1332 aa17.31■□□□□ 0.36
LCMT1-201ENST00000380962 WAPLQ7Z5K2 1190 aa17.31■□□□□ 0.36
LCMT1-201ENST00000380962 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
LCMT1-201ENST00000380962 AATKQ6ZMQ8 1374 aa17.3■□□□□ 0.36
LCMT1-201ENST00000380962 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
LCMT1-201ENST00000380962 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
LCMT1-201ENST00000380962 MON2Q7Z3U7 1717 aa17.29■□□□□ 0.36
LCMT1-201ENST00000380962 DIAPH1O60610 1272 aaKnown RBP17.29■□□□□ 0.36
LCMT1-201ENST00000380962 SLIT1O75093 1534 aa17.29■□□□□ 0.36
LCMT1-201ENST00000380962 MSH5O43196 834 aa17.28■□□□□ 0.36
LCMT1-201ENST00000380962 CCDC61Q9Y6R9 512 aa17.28■□□□□ 0.36
LCMT1-201ENST00000380962 ARHGAP23Q9P227 1491 aa17.28■□□□□ 0.36
LCMT1-201ENST00000380962 RARSP54136 660 aaKnown RBP17.27■□□□□ 0.36
LCMT1-201ENST00000380962 ZNF692Q9BU19 519 aaPredicted RBP17.27■□□□□ 0.36
LCMT1-201ENST00000380962 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
LCMT1-201ENST00000380962 AKAP12Q02952 1782 aa17.27■□□□□ 0.35
LCMT1-201ENST00000380962 CDK12Q9NYV4 1490 aaPredicted RBP17.27■□□□□ 0.35
LCMT1-201ENST00000380962 BCAR3O75815 825 aa17.26■□□□□ 0.35
LCMT1-201ENST00000380962 FCHSD2O94868 740 aa17.26■□□□□ 0.35
LCMT1-201ENST00000380962 DIP2AQ14689 1571 aa17.26■□□□□ 0.35
LCMT1-201ENST00000380962 ANP32AP39687 249 aaKnown RBP17.26■□□□□ 0.35
LCMT1-201ENST00000380962 TMPOP42166 694 aaKnown RBP17.26■□□□□ 0.35
LCMT1-201ENST00000380962 NUDT16Q96DE0 195 aaKnown RBP17.25■□□□□ 0.35
LCMT1-201ENST00000380962 BACH2Q9BYV9 841 aa17.25■□□□□ 0.35
LCMT1-201ENST00000380962 RRP7AQ9Y3A4 280 aaKnown RBP17.25■□□□□ 0.35
LCMT1-201ENST00000380962 ITSN1Q15811 1721 aa17.24■□□□□ 0.35
LCMT1-201ENST00000380962 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
LCMT1-201ENST00000380962 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
LCMT1-201ENST00000380962 TXNDC2Q86VQ3 553 aa17.24■□□□□ 0.35
LCMT1-201ENST00000380962 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
LCMT1-201ENST00000380962 C3P01024 1663 aa17.23■□□□□ 0.35
LCMT1-201ENST00000380962 PDE4AP27815 886 aa17.23■□□□□ 0.35
LCMT1-201ENST00000380962 POLKQ9UBT6 870 aa17.23■□□□□ 0.35
LCMT1-201ENST00000380962 TOPAZ1Q8N9V7 1692 aa17.23■□□□□ 0.35
LCMT1-201ENST00000380962 EID1Q9Y6B2 187 aa17.22■□□□□ 0.35
LCMT1-201ENST00000380962 PTCH1Q13635 1447 aa17.22■□□□□ 0.35
LCMT1-201ENST00000380962 ROBO2Q9HCK4 1378 aa17.22■□□□□ 0.35
LCMT1-201ENST00000380962 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
LCMT1-201ENST00000380962 ERICH6Q7L0X2 663 aa17.21■□□□□ 0.35
LCMT1-201ENST00000380962 TRIM35Q9UPQ4 493 aa17.21■□□□□ 0.34
LCMT1-201ENST00000380962 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
LCMT1-201ENST00000380962 PLEKHG3A1L390 1219 aa17.2■□□□□ 0.34
LCMT1-201ENST00000380962 NEFMP07197 916 aa17.2■□□□□ 0.34
LCMT1-201ENST00000380962 IPO9Q96P70 1041 aaKnown RBP17.2■□□□□ 0.34
LCMT1-201ENST00000380962 TBX22Q9Y458 520 aa17.2■□□□□ 0.34
LCMT1-201ENST00000380962 FER1L4A9Z1Z3 1794 aa17.19■□□□□ 0.34
LCMT1-201ENST00000380962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.19■□□□□ 0.347e-7■■□□□ 13.6
LCMT1-201ENST00000380962 CLUAP1Q96AJ1 413 aa17.19■□□□□ 0.34
LCMT1-201ENST00000380962 COG3Q96JB2 828 aa17.19■□□□□ 0.34
LCMT1-201ENST00000380962 RSPH6AQ9H0K4 717 aa17.19■□□□□ 0.34
LCMT1-201ENST00000380962 NRKQ7Z2Y5 1582 aa17.18■□□□□ 0.34
LCMT1-201ENST00000380962 MAP2P11137 1827 aaKnown RBP17.18■□□□□ 0.34
LCMT1-201ENST00000380962 CALD1Q05682 793 aaKnown RBP17.18■□□□□ 0.34
LCMT1-201ENST00000380962 ZNF428Q96B54 188 aa17.18■□□□□ 0.34
LCMT1-201ENST00000380962 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.18■□□□□ 0.34
LCMT1-201ENST00000380962 LTKP29376 864 aa17.17■□□□□ 0.34
LCMT1-201ENST00000380962 RIPK4P57078 832 aa17.16■□□□□ 0.34
LCMT1-201ENST00000380962 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
LCMT1-201ENST00000380962 IL13P35225 146 aa17.16■□□□□ 0.34
LCMT1-201ENST00000380962 THEMISQ8N1K5 641 aaPredicted RBP17.16■□□□□ 0.34
LCMT1-201ENST00000380962 PMFBP1Q8TBY8 1022 aa17.16■□□□□ 0.34
LCMT1-201ENST00000380962 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
LCMT1-201ENST00000380962 PIK3R4Q99570 1358 aa17.15■□□□□ 0.34
LCMT1-201ENST00000380962 NME9Q86XW9 330 aa17.15■□□□□ 0.34
LCMT1-201ENST00000380962 PTPRUQ92729 1446 aa17.15■□□□□ 0.34
LCMT1-201ENST00000380962 NFE2L2Q16236 605 aa17.14■□□□□ 0.33
LCMT1-201ENST00000380962 ZKSCAN2Q63HK3 967 aa17.14■□□□□ 0.33
LCMT1-201ENST00000380962 LMOD3Q0VAK6 560 aa17.13■□□□□ 0.33
LCMT1-201ENST00000380962 ALDH1L2Q3SY69 923 aa17.13■□□□□ 0.33
LCMT1-201ENST00000380962 OVOS2A0A0J9YW53 1432 aa17.13■□□□□ 0.33
LCMT1-201ENST00000380962 OVOS2Q6IE36 1432 aa17.13■□□□□ 0.33
LCMT1-201ENST00000380962 RIMS1Q86UR5 1692 aaKnown RBP17.13■□□□□ 0.33
LCMT1-201ENST00000380962 USP6P35125 1406 aa17.12■□□□□ 0.33
LCMT1-201ENST00000380962 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
LCMT1-201ENST00000380962 BRPF1P55201 1214 aaPredicted RBP17.12■□□□□ 0.33
LCMT1-201ENST00000380962 PANK1Q8TE04 598 aa17.12■□□□□ 0.33
LCMT1-201ENST00000380962 FBXO41Q8TF61 875 aa17.12■□□□□ 0.33
LCMT1-201ENST00000380962 FRAT1Q92837 279 aaPredicted RBP17.12■□□□□ 0.33
LCMT1-201ENST00000380962 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
LCMT1-201ENST00000380962 TTC21BQ7Z4L5 1316 aa17.12■□□□□ 0.33
LCMT1-201ENST00000380962 NALCNQ8IZF0 1738 aa17.12■□□□□ 0.33
LCMT1-201ENST00000380962 XRN1Q8IZH2 1706 aaKnown RBP17.12■□□□□ 0.33
LCMT1-201ENST00000380962 SSH2Q76I76 1423 aa17.12■□□□□ 0.33
LCMT1-201ENST00000380962 FAM161AQ3B820 660 aa17.11■□□□□ 0.33
LCMT1-201ENST00000380962 TTC21AQ8NDW8 1320 aa17.11■□□□□ 0.33
LCMT1-201ENST00000380962 USP31Q70CQ4 1352 aa17.11■□□□□ 0.33
LCMT1-201ENST00000380962 EXOSC9Q06265 439 aaKnown RBP17.11■□□□□ 0.33
LCMT1-201ENST00000380962 MVPQ14764 893 aaKnown RBP17.11■□□□□ 0.33
LCMT1-201ENST00000380962 KIF16BQ96L93 1317 aa17.1■□□□□ 0.33
LCMT1-201ENST00000380962 ANKARQ7Z5J8 1434 aa17.1■□□□□ 0.33
LCMT1-201ENST00000380962 DZIP1LQ8IYY4 767 aaKnown RBP17.1■□□□□ 0.33
LCMT1-201ENST00000380962 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
LCMT1-201ENST00000380962 TSR2Q969E8 191 aaKnown RBP17.09■□□□□ 0.33
LCMT1-201ENST00000380962 AMOTL2Q9Y2J4 779 aa17.09■□□□□ 0.33
LCMT1-201ENST00000380962 ACEP12821 1306 aa17.09■□□□□ 0.33
LCMT1-201ENST00000380962 IPO8O15397 1037 aaKnown RBP17.08■□□□□ 0.32
LCMT1-201ENST00000380962 CEBPAP49715 358 aaPredicted RBP17.08■□□□□ 0.32
LCMT1-201ENST00000380962 DDRGK1Q96HY6 314 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms