RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 TCP11L2Q8N4U5 519 aa20.36■□□□□ 0.85
COL4A3BP-203ENST00000380494 PRM3Q9NNZ6 103 aa20.36■□□□□ 0.85
COL4A3BP-203ENST00000380494 DHX16O60231 1041 aaKnown RBP20.36■□□□□ 0.85
COL4A3BP-203ENST00000380494 WDR63Q8IWG1 891 aa20.36■□□□□ 0.85
COL4A3BP-203ENST00000380494 CASKIN1Q8WXD9 1431 aa20.35■□□□□ 0.85
COL4A3BP-203ENST00000380494 FOSBP53539 338 aa20.35■□□□□ 0.85
COL4A3BP-203ENST00000380494 KRT85P78386 507 aa20.35■□□□□ 0.85
COL4A3BP-203ENST00000380494 TTC5Q8N0Z6 440 aa20.35■□□□□ 0.85
COL4A3BP-203ENST00000380494 DEF6Q9H4E7 631 aa20.35■□□□□ 0.85
COL4A3BP-203ENST00000380494 TXLNBQ8N3L3 684 aa20.34■□□□□ 0.85
COL4A3BP-203ENST00000380494 NOL10Q9BSC4 688 aaKnown RBP20.34■□□□□ 0.85
COL4A3BP-203ENST00000380494 PLEKHH2Q8IVE3 1493 aa20.34■□□□□ 0.85
COL4A3BP-203ENST00000380494 MVPQ14764 893 aaKnown RBP20.34■□□□□ 0.85
COL4A3BP-203ENST00000380494 JMYQ8N9B5 988 aa20.34■□□□□ 0.85
COL4A3BP-203ENST00000380494 ERICH3Q5RHP9 1530 aa20.33■□□□□ 0.85
COL4A3BP-203ENST00000380494 GOLGA6L10A6NI86 522 aa20.33■□□□□ 0.85
COL4A3BP-203ENST00000380494 MCM5P33992 734 aa20.33■□□□□ 0.85
COL4A3BP-203ENST00000380494 WWC1Q8IX03 1113 aa20.33■□□□□ 0.85
COL4A3BP-203ENST00000380494 GOLGA6L7A0A1B0GV03 622 aa20.33■□□□□ 0.84
COL4A3BP-203ENST00000380494 ERC1Q8IUD2 1116 aa20.33■□□□□ 0.84
COL4A3BP-203ENST00000380494 NCOA2Q15596 1464 aa20.32■□□□□ 0.84
COL4A3BP-203ENST00000380494 IQCEQ6IPM2 695 aa20.32■□□□□ 0.84
COL4A3BP-203ENST00000380494 CYP46A1Q9Y6A2 500 aa20.32■□□□□ 0.84
COL4A3BP-203ENST00000380494 SERPINC1P01008 464 aa20.32■□□□□ 0.84
COL4A3BP-203ENST00000380494 FSD1Q9BTV5 496 aa20.32■□□□□ 0.84
COL4A3BP-203ENST00000380494 CHD1LQ86WJ1 897 aa20.31■□□□□ 0.84
COL4A3BP-203ENST00000380494 CGNQ9P2M7 1197 aaKnown RBP20.31■□□□□ 0.84
COL4A3BP-203ENST00000380494 CLASRPQ8N2M8 674 aaKnown RBP20.31■□□□□ 0.84
COL4A3BP-203ENST00000380494 MAGEC2Q9UBF1 373 aaPredicted RBP20.31■□□□□ 0.84
COL4A3BP-203ENST00000380494 ZRSR2Q15696 482 aaKnown RBP20.31■□□□□ 0.84
COL4A3BP-203ENST00000380494 ZSCAN31Q96LW9 406 aaPredicted RBP20.31■□□□□ 0.84
COL4A3BP-203ENST00000380494 NOB1Q9ULX3 412 aaKnown RBP20.31■□□□□ 0.84
COL4A3BP-203ENST00000380494 MINK1Q8N4C8 1332 aaPredicted RBP20.31■□□□□ 0.84
COL4A3BP-203ENST00000380494 STK38Q15208 465 aa20.31■□□□□ 0.84
COL4A3BP-203ENST00000380494 ERLIN2O94905 339 aa20.3■□□□□ 0.84
COL4A3BP-203ENST00000380494 EXOSC9Q06265 439 aaKnown RBP20.3■□□□□ 0.84
COL4A3BP-203ENST00000380494 ANKRD50Q9ULJ7 1429 aa20.3■□□□□ 0.84
COL4A3BP-203ENST00000380494 CALCOCO1Q9P1Z2 691 aa20.3■□□□□ 0.84
COL4A3BP-203ENST00000380494 BCAR3O75815 825 aa20.3■□□□□ 0.84
COL4A3BP-203ENST00000380494 EPS15P42566 896 aa20.3■□□□□ 0.84
COL4A3BP-203ENST00000380494 G3V3G9 751 aa20.3■□□□□ 0.84
COL4A3BP-203ENST00000380494 OFD1O75665 1012 aa20.3■□□□□ 0.84
COL4A3BP-203ENST00000380494 DCAF8Q5TAQ9 597 aa20.3■□□□□ 0.84
COL4A3BP-203ENST00000380494 PPFIBP1Q86W92 1011 aa20.3■□□□□ 0.84
COL4A3BP-203ENST00000380494 SRCIN1Q9C0H9 1055 aa20.29■□□□□ 0.84
COL4A3BP-203ENST00000380494 NUP62CLQ9H1M0 184 aa20.29■□□□□ 0.84
COL4A3BP-203ENST00000380494 TTLL5Q6EMB2 1281 aa20.29■□□□□ 0.84
COL4A3BP-203ENST00000380494 ZNHIT6Q9NWK9 470 aaKnown RBP20.29■□□□□ 0.84
COL4A3BP-203ENST00000380494 CCDC30Q5VVM6 783 aa20.28■□□□□ 0.84
COL4A3BP-203ENST00000380494 GNAI2P04899 355 aa20.28■□□□□ 0.84
COL4A3BP-203ENST00000380494 GBP3Q9H0R5 595 aa20.28■□□□□ 0.84
COL4A3BP-203ENST00000380494 CEP57L1Q8IYX8 460 aa20.27■□□□□ 0.84
COL4A3BP-203ENST00000380494 HSP90AB3PQ58FF7 597 aa20.27■□□□□ 0.84
COL4A3BP-203ENST00000380494 CT47A1Q5JQC4 288 aaPredicted RBP20.27■□□□□ 0.84
COL4A3BP-203ENST00000380494 TMCO3Q6UWJ1 677 aa20.27■□□□□ 0.83
COL4A3BP-203ENST00000380494 NECTIN2Q92692 538 aa20.27■□□□□ 0.83
COL4A3BP-203ENST00000380494 GTF2E1P29083 439 aaPredicted RBP20.26■□□□□ 0.83
COL4A3BP-203ENST00000380494 LUC7LQ9NQ29 371 aaKnown RBP20.26■□□□□ 0.83
COL4A3BP-203ENST00000380494 HSP90AB2PQ58FF8 381 aa20.26■□□□□ 0.83
COL4A3BP-203ENST00000380494 PLEKHH1Q9ULM0 1364 aa20.26■□□□□ 0.83
COL4A3BP-203ENST00000380494 SMTNL1A8MU46 457 aa20.26■□□□□ 0.83
COL4A3BP-203ENST00000380494 MTHFSP49914 203 aa20.25■□□□□ 0.83
COL4A3BP-203ENST00000380494 SART3Q15020 963 aaKnown RBP20.25■□□□□ 0.83
COL4A3BP-203ENST00000380494 ATF7IPQ6VMQ6 1270 aa20.25■□□□□ 0.83
COL4A3BP-203ENST00000380494 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
COL4A3BP-203ENST00000380494 CFAP45Q9UL16 551 aa20.25■□□□□ 0.83
COL4A3BP-203ENST00000380494 TCEAL9Q9UHQ7 104 aa20.25■□□□□ 0.83
COL4A3BP-203ENST00000380494 TXLNAP40222 546 aa20.25■□□□□ 0.83
COL4A3BP-203ENST00000380494 UBXN4Q92575 508 aa20.25■□□□□ 0.83
COL4A3BP-203ENST00000380494 HFM1A2PYH4 1435 aa20.24■□□□□ 0.83
COL4A3BP-203ENST00000380494 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
COL4A3BP-203ENST00000380494 CCT4P50991 539 aaKnown RBP20.24■□□□□ 0.83
COL4A3BP-203ENST00000380494 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
COL4A3BP-203ENST00000380494 ERICH4A6NGS2 130 aa20.24■□□□□ 0.83
COL4A3BP-203ENST00000380494 TWISTNBQ3B726 338 aaPredicted RBP20.24■□□□□ 0.83
COL4A3BP-203ENST00000380494 DYNC1I1O14576 645 aa20.24■□□□□ 0.83
COL4A3BP-203ENST00000380494 SURF6O75683 361 aaKnown RBP20.24■□□□□ 0.83
COL4A3BP-203ENST00000380494 WASHC4Q2M389 1173 aa20.24■□□□□ 0.83
COL4A3BP-203ENST00000380494 LRRCC1Q9C099 1032 aa20.24■□□□□ 0.83
COL4A3BP-203ENST00000380494 PPP6R1Q9UPN7 881 aa20.24■□□□□ 0.83
COL4A3BP-203ENST00000380494 SPATA32Q96LK8 384 aa20.24■□□□□ 0.83
COL4A3BP-203ENST00000380494 SYCE3A1L190 88 aa20.23■□□□□ 0.83
COL4A3BP-203ENST00000380494 HMOX1P09601 288 aa20.23■□□□□ 0.83
COL4A3BP-203ENST00000380494 MAP3K11Q16584 847 aa20.23■□□□□ 0.83
COL4A3BP-203ENST00000380494 ZNF428Q96B54 188 aa20.23■□□□□ 0.83
COL4A3BP-203ENST00000380494 LARP1BQ659C4 914 aaKnown RBP20.22■□□□□ 0.83
COL4A3BP-203ENST00000380494 CCDC181Q5TID7 509 aa20.22■□□□□ 0.83
COL4A3BP-203ENST00000380494 JPH4Q96JJ6 628 aa20.22■□□□□ 0.83
COL4A3BP-203ENST00000380494 CCDC183Q5T5S1 534 aa20.22■□□□□ 0.83
COL4A3BP-203ENST00000380494 CBX1P83916 185 aa20.22■□□□□ 0.83
COL4A3BP-203ENST00000380494 ODF2Q5BJF6 829 aa20.22■□□□□ 0.83
COL4A3BP-203ENST00000380494 IGF1RP08069 1367 aa20.21■□□□□ 0.83
COL4A3BP-203ENST00000380494 FILIP1Q7Z7B0 1213 aa20.21■□□□□ 0.83
COL4A3BP-203ENST00000380494 KIAA1107Q9UPP5 1409 aa20.21■□□□□ 0.83
COL4A3BP-203ENST00000380494 PTPN14Q15678 1187 aa20.2■□□□□ 0.82
COL4A3BP-203ENST00000380494 FAM107BQ9H098 131 aa20.2■□□□□ 0.82
COL4A3BP-203ENST00000380494 ME1P48163 572 aa20.2■□□□□ 0.82
COL4A3BP-203ENST00000380494 RIC3Q7Z5B4 369 aa20.2■□□□□ 0.82
COL4A3BP-203ENST00000380494 UPF3BQ9BZI7 483 aaKnown RBP20.2■□□□□ 0.82
COL4A3BP-203ENST00000380494 C1orf115Q9H7X2 142 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms