RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 CEP170BQ9Y4F5 1589 aaPredicted RBP15.75■□□□□ 0.11
USP3-202ENST00000380324 EDC4Q6P2E9 1401 aaKnown RBP15.75■□□□□ 0.11
USP3-202ENST00000380324 SIRT1Q96EB6 747 aa15.74■□□□□ 0.11
USP3-202ENST00000380324 MAP2P11137 1827 aaKnown RBP15.74■□□□□ 0.11
USP3-202ENST00000380324 PRR36Q9H6K5 1346 aa15.74■□□□□ 0.11
USP3-202ENST00000380324 E9PSI1 815 aa15.74■□□□□ 0.11
USP3-202ENST00000380324 FBLN1P23142 703 aa15.74■□□□□ 0.11
USP3-202ENST00000380324 CCDC61Q9Y6R9 512 aa15.74■□□□□ 0.11
USP3-202ENST00000380324 PPM1GO15355 546 aaPredicted RBP15.73■□□□□ 0.11
USP3-202ENST00000380324 THEMISQ8N1K5 641 aaPredicted RBP15.73■□□□□ 0.11
USP3-202ENST00000380324 NME9Q86XW9 330 aa15.73■□□□□ 0.11
USP3-202ENST00000380324 NGEFQ8N5V2 710 aa15.73■□□□□ 0.11
USP3-202ENST00000380324 TRMT2AQ8IZ69 625 aaKnown RBP15.72■□□□□ 0.11
USP3-202ENST00000380324 TOPAZ1Q8N9V7 1692 aa15.72■□□□□ 0.11
USP3-202ENST00000380324 C20orf194Q5TEA3 1177 aa15.71■□□□□ 0.11
USP3-202ENST00000380324 ZRANB1Q9UGI0 708 aa15.71■□□□□ 0.1
USP3-202ENST00000380324 AMOTL2Q9Y2J4 779 aa15.71■□□□□ 0.1
USP3-202ENST00000380324 CRBNQ96SW2 442 aa15.7■□□□□ 0.1
USP3-202ENST00000380324 DIP2AQ14689 1571 aa15.7■□□□□ 0.1
USP3-202ENST00000380324 RBM19Q9Y4C8 960 aaKnown RBP15.69■□□□□ 0.1
USP3-202ENST00000380324 DIAPH1O60610 1272 aaKnown RBP15.69■□□□□ 0.1
USP3-202ENST00000380324 PTCH1Q13635 1447 aa15.68■□□□□ 0.1
USP3-202ENST00000380324 NRKQ7Z2Y5 1582 aa15.68■□□□□ 0.1
USP3-202ENST00000380324 XRN1Q8IZH2 1706 aaKnown RBP15.67■□□□□ 0.1
USP3-202ENST00000380324 POLKQ9UBT6 870 aa15.67■□□□□ 0.1
USP3-202ENST00000380324 TBX22Q9Y458 520 aa15.67■□□□□ 0.1
USP3-202ENST00000380324 EMILIN1Q9Y6C2 1016 aa15.67■□□□□ 0.1
USP3-202ENST00000380324 MAPK8IP3Q9UPT6 1336 aa15.67■□□□□ 0.1
USP3-202ENST00000380324 PNPLA6Q8IY17 1366 aa15.67■□□□□ 0.1
USP3-202ENST00000380324 LRRC7Q96NW7 1537 aa15.67■□□□□ 0.1
USP3-202ENST00000380324 RGPD8O14715 1765 aaPredicted RBP15.67■□□□□ 0.1
USP3-202ENST00000380324 COG3Q96JB2 828 aa15.66■□□□□ 0.1
USP3-202ENST00000380324 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
USP3-202ENST00000380324 BCAR3O75815 825 aa15.66■□□□□ 0.1
USP3-202ENST00000380324 ACEP12821 1306 aa15.65■□□□□ 0.1
USP3-202ENST00000380324 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.65■□□□□ 0.1
USP3-202ENST00000380324 PLEKHF1Q96S99 279 aa15.65■□□□□ 0.1
USP3-202ENST00000380324 ZNF142P52746 1687 aaPredicted RBP15.65■□□□□ 0.1
USP3-202ENST00000380324 ADAMTSL3P82987 1691 aa15.65■□□□□ 0.1
USP3-202ENST00000380324 RRS1Q15050 365 aaKnown RBP15.64■□□□□ 0.09
USP3-202ENST00000380324 CCDC27Q2M243 656 aa15.64■□□□□ 0.09
USP3-202ENST00000380324 WDR63Q8IWG1 891 aa15.63■□□□□ 0.09
USP3-202ENST00000380324 CDK12Q9NYV4 1490 aaPredicted RBP15.63■□□□□ 0.09
USP3-202ENST00000380324 ZNF692Q9BU19 519 aaPredicted RBP15.63■□□□□ 0.09
USP3-202ENST00000380324 KCNA6P17658 529 aa15.62■□□□□ 0.09
USP3-202ENST00000380324 TMPOP42166 694 aaKnown RBP15.62■□□□□ 0.09
USP3-202ENST00000380324 USP6P35125 1406 aa15.62■□□□□ 0.09
USP3-202ENST00000380324 PMFBP1Q8TBY8 1022 aa15.62■□□□□ 0.09
USP3-202ENST00000380324 TTC21BQ7Z4L5 1316 aa15.61■□□□□ 0.09
USP3-202ENST00000380324 HMOX1P09601 288 aa15.61■□□□□ 0.09
USP3-202ENST00000380324 AATKQ6ZMQ8 1374 aa15.61■□□□□ 0.09
USP3-202ENST00000380324 PRKAR2BP31323 418 aa15.6■□□□□ 0.09
USP3-202ENST00000380324 CANXP27824 592 aaKnown RBP15.6■□□□□ 0.09
USP3-202ENST00000380324 SETD1BQ9UPS6 1966 aaKnown RBP15.59■□□□□ 0.09
USP3-202ENST00000380324 PLEKHG3A1L390 1219 aa15.59■□□□□ 0.09
USP3-202ENST00000380324 TSR2Q969E8 191 aaKnown RBP15.59■□□□□ 0.09
USP3-202ENST00000380324 MYH16Q9H6N6 1097 aa15.59■□□□□ 0.09
USP3-202ENST00000380324 SOX12O15370 315 aa15.59■□□□□ 0.09
USP3-202ENST00000380324 RIPK4P57078 832 aa15.59■□□□□ 0.09
USP3-202ENST00000380324 BCL2L13Q9BXK5 485 aa15.59■□□□□ 0.09
USP3-202ENST00000380324 RSPH6AQ9H0K4 717 aa15.59■□□□□ 0.09
USP3-202ENST00000380324 TRIM35Q9UPQ4 493 aa15.59■□□□□ 0.09
USP3-202ENST00000380324 OVOS2A0A0J9YW53 1432 aa15.58■□□□□ 0.09
USP3-202ENST00000380324 OVOS2Q6IE36 1432 aa15.58■□□□□ 0.09
USP3-202ENST00000380324 NALCNQ8IZF0 1738 aa15.58■□□□□ 0.08
USP3-202ENST00000380324 FCHSD2O94868 740 aa15.57■□□□□ 0.08
USP3-202ENST00000380324 ANKLE2Q86XL3 938 aa15.57■□□□□ 0.08
USP3-202ENST00000380324 FRAT1Q92837 279 aaPredicted RBP15.57■□□□□ 0.08
USP3-202ENST00000380324 PNNQ9H307 717 aaKnown RBP15.57■□□□□ 0.08
USP3-202ENST00000380324 FANCIQ9NVI1 1328 aa15.57■□□□□ 0.08
USP3-202ENST00000380324 CHD2O14647 1828 aaKnown RBP15.57■□□□□ 0.08
USP3-202ENST00000380324 FMN2Q9NZ56 1722 aa15.56■□□□□ 0.08
USP3-202ENST00000380324 NEFMP07197 916 aa15.56■□□□□ 0.08
USP3-202ENST00000380324 IL13P35225 146 aa15.56■□□□□ 0.08
USP3-202ENST00000380324 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
USP3-202ENST00000380324 NGDNQ8NEJ9 315 aaKnown RBP15.56■□□□□ 0.08
USP3-202ENST00000380324 PIK3R4Q99570 1358 aa15.56■□□□□ 0.08
USP3-202ENST00000380324 RARSP54136 660 aaKnown RBP15.55■□□□□ 0.08
USP3-202ENST00000380324 RBM33Q96EV2 1170 aaKnown RBP15.55■□□□□ 0.08
USP3-202ENST00000380324 DNAJC5Q9H3Z4 198 aa15.55■□□□□ 0.08
USP3-202ENST00000380324 PEAK1Q9H792 1746 aa15.54■□□□□ 0.08
USP3-202ENST00000380324 PHACTR3Q96KR7 559 aa15.54■□□□□ 0.08
USP3-202ENST00000380324 DLG5Q8TDM6 1919 aa15.54■□□□□ 0.08
USP3-202ENST00000380324 PIK3C2AO00443 1686 aa15.54■□□□□ 0.08
USP3-202ENST00000380324 SSH2Q76I76 1423 aa15.53■□□□□ 0.08
USP3-202ENST00000380324 PANK1Q8TE04 598 aa15.53■□□□□ 0.08
USP3-202ENST00000380324 SKAP1Q86WV1 359 aa15.52■□□□□ 0.08
USP3-202ENST00000380324 ANKARQ7Z5J8 1434 aa15.51■□□□□ 0.07
USP3-202ENST00000380324 EXOSC9Q06265 439 aaKnown RBP15.51■□□□□ 0.07
USP3-202ENST00000380324 TTC21AQ8NDW8 1320 aa15.51■□□□□ 0.07
USP3-202ENST00000380324 COG6Q9Y2V7 657 aa15.51■□□□□ 0.07
USP3-202ENST00000380324 PDE3AQ14432 1141 aa15.5■□□□□ 0.07
USP3-202ENST00000380324 NFE2L2Q16236 605 aa15.5■□□□□ 0.07
USP3-202ENST00000380324 THUMPD2Q9BTF0 503 aaKnown RBP15.5■□□□□ 0.07
USP3-202ENST00000380324 TNNQ9UQP3 1299 aa15.5■□□□□ 0.07
USP3-202ENST00000380324 EIF4A2Q14240 407 aaKnown RBP15.5■□□□□ 0.07
USP3-202ENST00000380324 LAS1LQ9Y4W2 734 aaKnown RBP15.5■□□□□ 0.07
USP3-202ENST00000380324 USP31Q70CQ4 1352 aa15.49■□□□□ 0.07
USP3-202ENST00000380324 IL16Q14005 1332 aa15.49■□□□□ 0.07
USP3-202ENST00000380324 KDM2BQ8NHM5 1336 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms