RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 BRD4O60885 1362 aaPredicted RBP16.31■□□□□ 0.2
EXOSC9-202ENST00000379663 PIK3C2AO00443 1686 aa16.31■□□□□ 0.2
EXOSC9-202ENST00000379663 CCDC184Q52MB2 194 aa16.3■□□□□ 0.2
EXOSC9-202ENST00000379663 TRPM3Q9HCF6 1732 aaPredicted RBP16.3■□□□□ 0.2
EXOSC9-202ENST00000379663 ZNF335Q9H4Z2 1342 aaPredicted RBP16.29■□□□□ 0.2
EXOSC9-202ENST00000379663 NLRP13Q86W25 1043 aa16.29■□□□□ 0.2
EXOSC9-202ENST00000379663 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
EXOSC9-202ENST00000379663 C19orf44Q9H6X5 657 aa16.29■□□□□ 0.2
EXOSC9-202ENST00000379663 MST1RQ04912 1400 aa16.29■□□□□ 0.2
EXOSC9-202ENST00000379663 SHPRHQ149N8 1683 aa16.28■□□□□ 0.2
EXOSC9-202ENST00000379663 NUTM2FA1L443 756 aa16.28■□□□□ 0.2
EXOSC9-202ENST00000379663 CNGB1Q14028 1251 aaPredicted RBP16.28■□□□□ 0.2
EXOSC9-202ENST00000379663 ACEP12821 1306 aa16.28■□□□□ 0.2
EXOSC9-202ENST00000379663 LTBP4Q8N2S1 1624 aa16.28■□□□□ 0.2
EXOSC9-202ENST00000379663 C1orf167Q5SNV9 1468 aa16.27■□□□□ 0.19
EXOSC9-202ENST00000379663 FYB1O15117 783 aa16.25■□□□□ 0.19
EXOSC9-202ENST00000379663 PPP2R1AP30153 589 aa16.25■□□□□ 0.19
EXOSC9-202ENST00000379663 MRS2Q9HD23 443 aa16.25■□□□□ 0.19
EXOSC9-202ENST00000379663 C14orf37Q86TY3 774 aa16.24■□□□□ 0.19
EXOSC9-202ENST00000379663 MSH6P52701 1360 aa16.24■□□□□ 0.19
EXOSC9-202ENST00000379663 OVOS2A0A0J9YW53 1432 aa16.24■□□□□ 0.19
EXOSC9-202ENST00000379663 OVOS2Q6IE36 1432 aa16.24■□□□□ 0.19
EXOSC9-202ENST00000379663 ALS2Q96Q42 1657 aa16.23■□□□□ 0.19
EXOSC9-202ENST00000379663 PMFBP1Q8TBY8 1022 aa16.22■□□□□ 0.19
EXOSC9-202ENST00000379663 TTC21BQ7Z4L5 1316 aa16.22■□□□□ 0.19
EXOSC9-202ENST00000379663 MORC1Q86VD1 984 aa16.21■□□□□ 0.19
EXOSC9-202ENST00000379663 GGNBP2Q9H3C7 697 aa16.21■□□□□ 0.19
EXOSC9-202ENST00000379663 PHF8Q9UPP1 1060 aa16.21■□□□□ 0.19
EXOSC9-202ENST00000379663 TTC21AQ8NDW8 1320 aa16.21■□□□□ 0.19
EXOSC9-202ENST00000379663 SMG6Q86US8 1419 aaKnown RBP16.2■□□□□ 0.18
EXOSC9-202ENST00000379663 NHSL1Q5SYE7 1610 aa16.2■□□□□ 0.18
EXOSC9-202ENST00000379663 CADPS2Q86UW7 1296 aa16.19■□□□□ 0.18
EXOSC9-202ENST00000379663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.19■□□□□ 0.18
EXOSC9-202ENST00000379663 PNISRQ8TF01 805 aaKnown RBP16.19■□□□□ 0.18
EXOSC9-202ENST00000379663 ATF3P18847 181 aa16.19■□□□□ 0.18
EXOSC9-202ENST00000379663 NGDNQ8NEJ9 315 aaKnown RBP16.19■□□□□ 0.18
EXOSC9-202ENST00000379663 COL3A1P02461 1466 aaPredicted RBP16.18■□□□□ 0.18
EXOSC9-202ENST00000379663 USP31Q70CQ4 1352 aa16.18■□□□□ 0.18
EXOSC9-202ENST00000379663 LTN1O94822 1766 aa16.18■□□□□ 0.18
EXOSC9-202ENST00000379663 CRYBG1Q9Y4K1 1723 aa16.18■□□□□ 0.18
EXOSC9-202ENST00000379663 NME9Q86XW9 330 aa16.18■□□□□ 0.18
EXOSC9-202ENST00000379663 INSRP06213 1382 aa16.17■□□□□ 0.18
EXOSC9-202ENST00000379663 AATKQ6ZMQ8 1374 aa16.17■□□□□ 0.18
EXOSC9-202ENST00000379663 ESCO1Q5FWF5 840 aa16.17■□□□□ 0.18
EXOSC9-202ENST00000379663 ORAI2Q96SN7 254 aa16.17■□□□□ 0.18
EXOSC9-202ENST00000379663 PEAK1Q9H792 1746 aa16.17■□□□□ 0.18
EXOSC9-202ENST00000379663 PHRF1Q9P1Y6 1649 aaKnown RBP16.16■□□□□ 0.18
EXOSC9-202ENST00000379663 CDK12Q9NYV4 1490 aaPredicted RBP16.15■□□□□ 0.18
EXOSC9-202ENST00000379663 KCNA4P22459 653 aa16.14■□□□□ 0.18
EXOSC9-202ENST00000379663 YTHDC1Q96MU7 727 aaKnown RBP16.14■□□□□ 0.18
EXOSC9-202ENST00000379663 PXDNQ92626 1479 aa16.14■□□□□ 0.17
EXOSC9-202ENST00000379663 BLMP54132 1417 aaPredicted RBP16.14■□□□□ 0.17
EXOSC9-202ENST00000379663 PNPLA6Q8IY17 1366 aa16.13■□□□□ 0.17
EXOSC9-202ENST00000379663 COG3Q96JB2 828 aa16.13■□□□□ 0.17
EXOSC9-202ENST00000379663 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
EXOSC9-202ENST00000379663 SLIT3O75094 1523 aa16.13■□□□□ 0.17
EXOSC9-202ENST00000379663 TNNT2P45379 298 aaPredicted RBP16.12■□□□□ 0.17
EXOSC9-202ENST00000379663 FAM9BQ8IZU0 186 aa16.12■□□□□ 0.17
EXOSC9-202ENST00000379663 NFAT5O94916 1531 aa16.12■□□□□ 0.17
EXOSC9-202ENST00000379663 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
EXOSC9-202ENST00000379663 MTHFSP49914 203 aa16.11■□□□□ 0.17
EXOSC9-202ENST00000379663 ABCA3Q99758 1704 aa16.1■□□□□ 0.17
EXOSC9-202ENST00000379663 MED1Q15648 1581 aaPredicted RBP16.1■□□□□ 0.17
EXOSC9-202ENST00000379663 RGPD1P0DJD0 1748 aa16.1■□□□□ 0.17
EXOSC9-202ENST00000379663 FOXO3O43524 673 aa16.09■□□□□ 0.17
EXOSC9-202ENST00000379663 SBNO1A3KN83 1393 aa16.09■□□□□ 0.17
EXOSC9-202ENST00000379663 PSME1Q06323 249 aa16.09■□□□□ 0.17
EXOSC9-202ENST00000379663 POLKQ9UBT6 870 aa16.09■□□□□ 0.17
EXOSC9-202ENST00000379663 BRINP3Q76B58 766 aa16.08■□□□□ 0.16
EXOSC9-202ENST00000379663 NPHP3Q7Z494 1330 aa16.07■□□□□ 0.16
EXOSC9-202ENST00000379663 AHDC1Q5TGY3 1603 aaPredicted RBP16.07■□□□□ 0.16
EXOSC9-202ENST00000379663 SLAIN2Q9P270 581 aa16.07■□□□□ 0.16
EXOSC9-202ENST00000379663 TNS3Q68CZ2 1445 aa16.06■□□□□ 0.16
EXOSC9-202ENST00000379663 IQSEC2Q5JU85 1478 aa16.06■□□□□ 0.16
EXOSC9-202ENST00000379663 KRT28Q7Z3Y7 464 aa16.05■□□□□ 0.16
EXOSC9-202ENST00000379663 ABTB2Q8N961 1025 aa16.05■□□□□ 0.16
EXOSC9-202ENST00000379663 CFAP53Q96M91 514 aa16.05■□□□□ 0.16
EXOSC9-202ENST00000379663 KIF24Q5T7B8 1368 aa16.05■□□□□ 0.16
EXOSC9-202ENST00000379663 RGPD5Q99666 1765 aa16.05■□□□□ 0.16
EXOSC9-202ENST00000379663 FBLN1P23142 703 aa16.04■□□□□ 0.16
EXOSC9-202ENST00000379663 NLRP6P59044 892 aa16.04■□□□□ 0.16
EXOSC9-202ENST00000379663 USP19O94966 1318 aa16.04■□□□□ 0.16
EXOSC9-202ENST00000379663 PAK3O75914 559 aaPredicted RBP16.04■□□□□ 0.16
EXOSC9-202ENST00000379663 HNRNPUQ00839 825 aaKnown RBP eCLIP16.04■□□□□ 0.16
EXOSC9-202ENST00000379663 ADAMTS8Q9UP79 889 aa16.04■□□□□ 0.16
EXOSC9-202ENST00000379663 EMILIN1Q9Y6C2 1016 aa16.04■□□□□ 0.16
EXOSC9-202ENST00000379663 XPCQ01831 940 aaPredicted RBP16.03■□□□□ 0.16
EXOSC9-202ENST00000379663 WDR43Q15061 677 aaKnown RBP eCLIP16.03■□□□□ 0.16
EXOSC9-202ENST00000379663 SOS2Q07890 1332 aaPredicted RBP16.03■□□□□ 0.16
EXOSC9-202ENST00000379663 RRS1Q15050 365 aaKnown RBP16.02■□□□□ 0.15
EXOSC9-202ENST00000379663 ZBED9Q6R2W3 1325 aa16.02■□□□□ 0.15
EXOSC9-202ENST00000379663 COL18A1P39060 1754 aa16.02■□□□□ 0.15
EXOSC9-202ENST00000379663 DDX17Q92841 729 aaKnown RBP16.01■□□□□ 0.15
EXOSC9-202ENST00000379663 RTL1A6NKG5 1358 aa16.01■□□□□ 0.15
EXOSC9-202ENST00000379663 FLT4P35916 1363 aa16.01■□□□□ 0.15
EXOSC9-202ENST00000379663 COL22A1Q8NFW1 1626 aaPredicted RBP16.01■□□□□ 0.15
EXOSC9-202ENST00000379663 RGPD2P0DJD1 1756 aa16■□□□□ 0.15
EXOSC9-202ENST00000379663 CENPBP07199 599 aaPredicted RBP16■□□□□ 0.15
EXOSC9-202ENST00000379663 MAP3K19Q56UN5 1328 aa16■□□□□ 0.15
EXOSC9-202ENST00000379663 SPATA31A3Q5VYP0 1347 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms