RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 BRPF3Q9ULD4 1205 aa17.81■□□□□ 0.44
EXT1-201ENST00000378204 KINO60870 393 aaKnown RBP17.81■□□□□ 0.44
EXT1-201ENST00000378204 MTHFSP49914 203 aa17.81■□□□□ 0.44
EXT1-201ENST00000378204 GGNBP2Q9H3C7 697 aa17.8■□□□□ 0.44
EXT1-201ENST00000378204 TBC1D2BQ9UPU7 963 aa17.8■□□□□ 0.44
EXT1-201ENST00000378204 GOLGA6L7A0A1B0GV03 622 aa17.8■□□□□ 0.44
EXT1-201ENST00000378204 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
EXT1-201ENST00000378204 FYCO1Q9BQS8 1478 aa17.8■□□□□ 0.44
EXT1-201ENST00000378204 ANKRD50Q9ULJ7 1429 aa17.79■□□□□ 0.44
EXT1-201ENST00000378204 FSD1Q9BTV5 496 aa17.79■□□□□ 0.44
EXT1-201ENST00000378204 GAS2L2Q8NHY3 880 aa17.79■□□□□ 0.44
EXT1-201ENST00000378204 PDILTQ8N807 584 aa17.79■□□□□ 0.44
EXT1-201ENST00000378204 CWC22Q9HCG8 908 aaKnown RBP17.79■□□□□ 0.44
EXT1-201ENST00000378204 NLRP2Q9NX02 1062 aa17.78■□□□□ 0.44
EXT1-201ENST00000378204 MYO6Q9UM54 1294 aa17.78■□□□□ 0.44
EXT1-201ENST00000378204 FYB1O15117 783 aa17.78■□□□□ 0.44
EXT1-201ENST00000378204 SURF6O75683 361 aaKnown RBP17.78■□□□□ 0.44
EXT1-201ENST00000378204 FGD5Q6ZNL6 1462 aa17.77■□□□□ 0.44
EXT1-201ENST00000378204 PDCL2Q8N4E4 241 aa17.77■□□□□ 0.44
EXT1-201ENST00000378204 CABP2Q9NPB3 220 aa17.77■□□□□ 0.44
EXT1-201ENST00000378204 ADAMTS8Q9UP79 889 aa17.77■□□□□ 0.44
EXT1-201ENST00000378204 SSR1P43307 286 aaKnown RBP17.77■□□□□ 0.44
EXT1-201ENST00000378204 NLRP6P59044 892 aa17.77■□□□□ 0.44
EXT1-201ENST00000378204 TRIM5Q9C035 493 aa17.77■□□□□ 0.44
EXT1-201ENST00000378204 OSCARQ8IYS5 282 aa17.77■□□□□ 0.44
EXT1-201ENST00000378204 LRRC9Q6ZRR7 1453 aa17.77■□□□□ 0.43
EXT1-201ENST00000378204 TRAK2O60296 914 aa17.77■□□□□ 0.43
EXT1-201ENST00000378204 TXLNAP40222 546 aa17.76■□□□□ 0.43
EXT1-201ENST00000378204 ERC1Q8IUD2 1116 aa17.76■□□□□ 0.43
EXT1-201ENST00000378204 CAGE1Q8TC20 777 aa17.76■□□□□ 0.43
EXT1-201ENST00000378204 ARHGAP5Q13017 1502 aa17.76■□□□□ 0.43
EXT1-201ENST00000378204 NEK4P51957 841 aa17.76■□□□□ 0.43
EXT1-201ENST00000378204 SLC3A2P08195 630 aaKnown RBP17.76■□□□□ 0.43
EXT1-201ENST00000378204 WASHC2AQ641Q2 1341 aa17.75■□□□□ 0.43
EXT1-201ENST00000378204 FILIP1LQ4L180 1135 aa17.75■□□□□ 0.43
EXT1-201ENST00000378204 ZFYVE27Q5T4F4 411 aa17.75■□□□□ 0.43
EXT1-201ENST00000378204 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
EXT1-201ENST00000378204 TCP11L2Q8N4U5 519 aa17.75■□□□□ 0.43
EXT1-201ENST00000378204 RABEP1Q15276 862 aa17.75■□□□□ 0.43
EXT1-201ENST00000378204 CAVIN1Q6NZI2 390 aaKnown RBP17.75■□□□□ 0.43
EXT1-201ENST00000378204 SMARCE1Q969G3 411 aa17.75■□□□□ 0.43
EXT1-201ENST00000378204 KIF21BO75037 1637 aa17.74■□□□□ 0.43
EXT1-201ENST00000378204 CCP110O43303 1012 aa17.74■□□□□ 0.43
EXT1-201ENST00000378204 SCAPERQ9BY12 1400 aa17.74■□□□□ 0.43
EXT1-201ENST00000378204 HSP90AB2PQ58FF8 381 aa17.74■□□□□ 0.43
EXT1-201ENST00000378204 RNF214Q8ND24 703 aa17.74■□□□□ 0.43
EXT1-201ENST00000378204 GNAI2P04899 355 aa17.74■□□□□ 0.43
EXT1-201ENST00000378204 IKQ13123 557 aaPredicted RBP17.74■□□□□ 0.43
EXT1-201ENST00000378204 KIF6Q6ZMV9 814 aa17.74■□□□□ 0.43
EXT1-201ENST00000378204 GCC1Q96CN9 775 aa17.74■□□□□ 0.43
EXT1-201ENST00000378204 GPRASP1Q5JY77 1395 aa17.73■□□□□ 0.43
EXT1-201ENST00000378204 ABTB2Q8N961 1025 aa17.73■□□□□ 0.43
EXT1-201ENST00000378204 DNAJC2Q99543 621 aaKnown RBP17.73■□□□□ 0.43
EXT1-201ENST00000378204 PDE3AQ14432 1141 aa17.73■□□□□ 0.43
EXT1-201ENST00000378204 ZNF396Q96N95 335 aaPredicted RBP17.73■□□□□ 0.43
EXT1-201ENST00000378204 SMG6Q86US8 1419 aaKnown RBP17.73■□□□□ 0.43
EXT1-201ENST00000378204 GPATCH11Q8N954 259 aa17.73■□□□□ 0.43
EXT1-201ENST00000378204 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.73■□□□□ 0.437e-6■■■■■ 74.5
EXT1-201ENST00000378204 ZNF644Q9H582 1327 aaPredicted RBP17.73■□□□□ 0.43
EXT1-201ENST00000378204 UQCRHLA0A096LP55 91 aa17.72■□□□□ 0.43
EXT1-201ENST00000378204 UQCRHP07919 91 aa17.72■□□□□ 0.43
EXT1-201ENST00000378204 TMEM132EQ6IEE7 984 aa17.72■□□□□ 0.43
EXT1-201ENST00000378204 MAGEC2Q9UBF1 373 aaPredicted RBP17.72■□□□□ 0.43
EXT1-201ENST00000378204 JMYQ8N9B5 988 aa17.71■□□□□ 0.43
EXT1-201ENST00000378204 FBXO3Q9UK99 471 aa17.71■□□□□ 0.43
EXT1-201ENST00000378204 PLEKHO1Q53GL0 409 aaPredicted RBP17.71■□□□□ 0.43
EXT1-201ENST00000378204 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
EXT1-201ENST00000378204 CDK5RAP3Q96JB5 506 aa17.71■□□□□ 0.43
EXT1-201ENST00000378204 SMC2O95347 1197 aa17.71■□□□□ 0.43
EXT1-201ENST00000378204 TSPY26PQ9H489 355 aa17.71■□□□□ 0.43
EXT1-201ENST00000378204 FAM69CQ0P6D2 419 aa17.71■□□□□ 0.42
EXT1-201ENST00000378204 DHX8Q14562 1220 aaKnown RBP17.7■□□□□ 0.42
EXT1-201ENST00000378204 PIP4K2AP48426 406 aaPredicted RBP17.7■□□□□ 0.42
EXT1-201ENST00000378204 ANKRD1Q15327 319 aa17.7■□□□□ 0.42
EXT1-201ENST00000378204 KRI1Q8N9T8 703 aaKnown RBP17.7■□□□□ 0.42
EXT1-201ENST00000378204 TWISTNBQ3B726 338 aaPredicted RBP17.69■□□□□ 0.42
EXT1-201ENST00000378204 PRKAR2BP31323 418 aa17.69■□□□□ 0.42
EXT1-201ENST00000378204 TTLL5Q6EMB2 1281 aa17.69■□□□□ 0.42
EXT1-201ENST00000378204 CCAR1Q8IX12 1150 aaKnown RBP17.69■□□□□ 0.42
EXT1-201ENST00000378204 MTMR7Q9Y216 660 aa17.69■□□□□ 0.42
EXT1-201ENST00000378204 NCOA2Q15596 1464 aa17.68■□□□□ 0.42
EXT1-201ENST00000378204 IGF1RP08069 1367 aa17.68■□□□□ 0.42
EXT1-201ENST00000378204 CGNQ9P2M7 1197 aaKnown RBP17.68■□□□□ 0.42
EXT1-201ENST00000378204 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.68■□□□□ 0.42
EXT1-201ENST00000378204 PRPF40AO75400 957 aaKnown RBP17.67■□□□□ 0.42
EXT1-201ENST00000378204 PPP2R1AP30153 589 aa17.67■□□□□ 0.42
EXT1-201ENST00000378204 FMNL2Q96PY5 1086 aa17.67■□□□□ 0.42
EXT1-201ENST00000378204 EIF3JO75822 258 aaKnown RBP17.67■□□□□ 0.42
EXT1-201ENST00000378204 CCT4P50991 539 aaKnown RBP17.67■□□□□ 0.42
EXT1-201ENST00000378204 CCDC158Q5M9N0 1113 aa17.67■□□□□ 0.42
EXT1-201ENST00000378204 CT47B1P0C2W7 299 aaPredicted RBP17.67■□□□□ 0.42
EXT1-201ENST00000378204 ATP2B1P20020 1258 aa17.67■□□□□ 0.42
EXT1-201ENST00000378204 CASKIN1Q8WXD9 1431 aa17.67■□□□□ 0.42
EXT1-201ENST00000378204 FIBPO43427 364 aa17.67■□□□□ 0.42
EXT1-201ENST00000378204 PDZRN3Q9UPQ7 1066 aa17.67■□□□□ 0.42
EXT1-201ENST00000378204 STK38Q15208 465 aa17.67■□□□□ 0.42
EXT1-201ENST00000378204 GNL3LQ9NVN8 582 aaKnown RBP17.67■□□□□ 0.42
EXT1-201ENST00000378204 ZNHIT6Q9NWK9 470 aaKnown RBP17.66■□□□□ 0.42
EXT1-201ENST00000378204 DDX11Q96FC9 970 aa17.66■□□□□ 0.42
EXT1-201ENST00000378204 SYCP1Q15431 976 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms