RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 RBM33Q96EV2 1170 aaKnown RBP13.01□□□□□ -0.33
USP11-203ENST00000377080 VIRMAQ69YN4 1812 aaKnown RBP13.01□□□□□ -0.33
USP11-203ENST00000377080 CFAP53Q96M91 514 aa13□□□□□ -0.33
USP11-203ENST00000377080 EID1Q9Y6B2 187 aa13□□□□□ -0.33
USP11-203ENST00000377080 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
USP11-203ENST00000377080 SPATA31A6Q5VVP1 1343 aa12.99□□□□□ -0.33
USP11-203ENST00000377080 EVC2Q86UK5 1308 aa12.99□□□□□ -0.33
USP11-203ENST00000377080 MAPK8IP3Q9UPT6 1336 aa12.99□□□□□ -0.33
USP11-203ENST00000377080 MORC1Q86VD1 984 aa12.99□□□□□ -0.33
USP11-203ENST00000377080 PROSER2Q86WR7 435 aaPredicted RBP12.99□□□□□ -0.33
USP11-203ENST00000377080 SLC52A1Q9NWF4 448 aa12.99□□□□□ -0.33
USP11-203ENST00000377080 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
USP11-203ENST00000377080 CDK12Q9NYV4 1490 aaPredicted RBP12.98□□□□□ -0.33
USP11-203ENST00000377080 NSD3Q9BZ95 1437 aa12.98□□□□□ -0.33
USP11-203ENST00000377080 MSH6P52701 1360 aa12.98□□□□□ -0.33
USP11-203ENST00000377080 KCNA6P17658 529 aa12.98□□□□□ -0.33
USP11-203ENST00000377080 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
USP11-203ENST00000377080 NEXMIFQ5QGS0 1516 aa12.98□□□□□ -0.33
USP11-203ENST00000377080 TMEM2Q9UHN6 1383 aa12.97□□□□□ -0.33
USP11-203ENST00000377080 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
USP11-203ENST00000377080 SLAIN2Q9P270 581 aa12.97□□□□□ -0.33
USP11-203ENST00000377080 PMFBP1Q8TBY8 1022 aa12.96□□□□□ -0.33
USP11-203ENST00000377080 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
USP11-203ENST00000377080 MYO5BQ9ULV0 1848 aa12.96□□□□□ -0.33
USP11-203ENST00000377080 ADGRB2O60241 1585 aa12.95□□□□□ -0.34
USP11-203ENST00000377080 NWD1Q149M9 1564 aa12.95□□□□□ -0.34
USP11-203ENST00000377080 IDI1Q13907 227 aa12.95□□□□□ -0.34
USP11-203ENST00000377080 CCDC146Q8IYE0 955 aa12.95□□□□□ -0.34
USP11-203ENST00000377080 ANKRD26Q9UPS8 1709 aa12.95□□□□□ -0.34
USP11-203ENST00000377080 CLUAP1Q96AJ1 413 aa12.94□□□□□ -0.34
USP11-203ENST00000377080 MYH16Q9H6N6 1097 aa12.94□□□□□ -0.34
USP11-203ENST00000377080 NBR1Q14596 966 aa12.93□□□□□ -0.34
USP11-203ENST00000377080 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
USP11-203ENST00000377080 SLC26A8Q96RN1 970 aa12.93□□□□□ -0.34
USP11-203ENST00000377080 SLC12A5Q9H2X9 1139 aa12.93□□□□□ -0.34
USP11-203ENST00000377080 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
USP11-203ENST00000377080 IL16Q14005 1332 aa12.92□□□□□ -0.34
USP11-203ENST00000377080 BCAR3O75815 825 aa12.92□□□□□ -0.34
USP11-203ENST00000377080 RARSP54136 660 aaKnown RBP12.92□□□□□ -0.34
USP11-203ENST00000377080 TCP11L2Q8N4U5 519 aa12.92□□□□□ -0.34
USP11-203ENST00000377080 PNNQ9H307 717 aaKnown RBP12.92□□□□□ -0.34
USP11-203ENST00000377080 DAXXQ9UER7 740 aaPredicted RBP12.92□□□□□ -0.34
USP11-203ENST00000377080 TRAK1Q9UPV9 953 aa12.92□□□□□ -0.34
USP11-203ENST00000377080 ABCC11Q96J66 1382 aa12.92□□□□□ -0.34
USP11-203ENST00000377080 MTHFSP49914 203 aa12.91□□□□□ -0.34
USP11-203ENST00000377080 ATAD2Q6PL18 1390 aa12.91□□□□□ -0.34
USP11-203ENST00000377080 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
USP11-203ENST00000377080 RGS12O14924 1447 aa12.9□□□□□ -0.34
USP11-203ENST00000377080 TMEM131LA2VDJ0 1609 aa12.9□□□□□ -0.34
USP11-203ENST00000377080 NUTM2BA6NNL0 878 aaPredicted RBP12.89□□□□□ -0.35
USP11-203ENST00000377080 NUTM2EB1AL46 878 aaPredicted RBP12.89□□□□□ -0.35
USP11-203ENST00000377080 NEFMP07197 916 aa12.89□□□□□ -0.35
USP11-203ENST00000377080 NUTM2DQ5VT03 806 aaPredicted RBP12.89□□□□□ -0.35
USP11-203ENST00000377080 NUTM2AQ8IVF1 878 aaPredicted RBP12.89□□□□□ -0.35
USP11-203ENST00000377080 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
USP11-203ENST00000377080 AFF2P51816 1311 aa12.88□□□□□ -0.35
USP11-203ENST00000377080 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
USP11-203ENST00000377080 CHGAP10645 457 aaKnown RBP12.88□□□□□ -0.35
USP11-203ENST00000377080 RWDD1Q9H446 243 aaPredicted RBP12.88□□□□□ -0.35
USP11-203ENST00000377080 IGHDP01880 384 aa12.87□□□□□ -0.35
USP11-203ENST00000377080 ZNF428Q96B54 188 aa12.87□□□□□ -0.35
USP11-203ENST00000377080 TERF2IPQ9NYB0 399 aa12.87□□□□□ -0.35
USP11-203ENST00000377080 DIP2AQ14689 1571 aa12.86□□□□□ -0.35
USP11-203ENST00000377080 CDC42BPGQ6DT37 1551 aa12.86□□□□□ -0.35
USP11-203ENST00000377080 COL3A1P02461 1466 aaPredicted RBP12.86□□□□□ -0.35
USP11-203ENST00000377080 PNPLA6Q8IY17 1366 aa12.86□□□□□ -0.35
USP11-203ENST00000377080 CANXP27824 592 aaKnown RBP12.86□□□□□ -0.35
USP11-203ENST00000377080 DLC1Q96QB1 1528 aa12.86□□□□□ -0.35
USP11-203ENST00000377080 RBM6P78332 1123 aaKnown RBP12.85□□□□□ -0.35
USP11-203ENST00000377080 TMEM132EQ6IEE7 984 aa12.85□□□□□ -0.35
USP11-203ENST00000377080 RIMS2Q9UQ26 1411 aa12.85□□□□□ -0.35
USP11-203ENST00000377080 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.85□□□□□ -0.35
USP11-203ENST00000377080 BRPF1P55201 1214 aaPredicted RBP12.84□□□□□ -0.35
USP11-203ENST00000377080 BECN1Q14457 450 aa12.84□□□□□ -0.35
USP11-203ENST00000377080 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
USP11-203ENST00000377080 C14orf37Q86TY3 774 aa12.84□□□□□ -0.35
USP11-203ENST00000377080 PLEKHF1Q96S99 279 aa12.84□□□□□ -0.35
USP11-203ENST00000377080 PLEKHG1Q9ULL1 1385 aa12.83□□□□□ -0.36
USP11-203ENST00000377080 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
USP11-203ENST00000377080 QTRT2Q9H974 415 aaKnown RBP12.83□□□□□ -0.36
USP11-203ENST00000377080 COG6Q9Y2V7 657 aa12.83□□□□□ -0.36
USP11-203ENST00000377080 YTHDC2Q9H6S0 1430 aaKnown RBP12.82□□□□□ -0.36
USP11-203ENST00000377080 GSE1Q14687 1217 aa12.82□□□□□ -0.36
USP11-203ENST00000377080 MVPQ14764 893 aaKnown RBP12.82□□□□□ -0.36
USP11-203ENST00000377080 NFKBIBQ15653 356 aa12.82□□□□□ -0.36
USP11-203ENST00000377080 PANK1Q8TE04 598 aa12.82□□□□□ -0.36
USP11-203ENST00000377080 CHMP4BQ9H444 224 aaKnown RBP12.82□□□□□ -0.36
USP11-203ENST00000377080 USP19O94966 1318 aa12.82□□□□□ -0.36
USP11-203ENST00000377080 A0A1W2PP64 1363 aa12.81□□□□□ -0.36
USP11-203ENST00000377080 KIF20BQ96Q89 1820 aa12.81□□□□□ -0.36
USP11-203ENST00000377080 PPIP5K1Q6PFW1 1433 aa12.81□□□□□ -0.36
USP11-203ENST00000377080 CD163L1Q9NR16 1453 aa12.81□□□□□ -0.36
USP11-203ENST00000377080 U2AF1L5P0DN76 240 aaPredicted RBP12.81□□□□□ -0.36
USP11-203ENST00000377080 RGS3P49796 1198 aa12.81□□□□□ -0.36
USP11-203ENST00000377080 U2AF1Q01081 240 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP11-203ENST00000377080 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
USP11-203ENST00000377080 C8orf37Q96NL8 207 aa12.81□□□□□ -0.36
USP11-203ENST00000377080 LAS1LQ9Y4W2 734 aaKnown RBP12.81□□□□□ -0.36
USP11-203ENST00000377080 NCOA3Q9Y6Q9 1424 aa12.8□□□□□ -0.36
USP11-203ENST00000377080 ATP7BP35670 1465 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms