RNA–Protein interactions for RNA: ENST00000377036.2

DFFA-201, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene DFFA, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-201ENST00000377036 NPC1L1Q9UHC9 1359 aa23.59■■□□□ 1.37
DFFA-201ENST00000377036 AKAP12Q02952 1782 aa23.58■■□□□ 1.37
DFFA-201ENST00000377036 PAK3O75914 559 aaPredicted RBP23.58■■□□□ 1.36
DFFA-201ENST00000377036 PXDNQ92626 1479 aa23.57■■□□□ 1.36
DFFA-201ENST00000377036 LRRC59Q96AG4 307 aaKnown RBP23.57■■□□□ 1.36
DFFA-201ENST00000377036 MON2Q7Z3U7 1717 aa23.56■■□□□ 1.36
DFFA-201ENST00000377036 ARHGEF10O15013 1369 aa23.56■■□□□ 1.36
DFFA-201ENST00000377036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.56■■□□□ 1.36
DFFA-201ENST00000377036 NHSL1Q5SYE7 1610 aa23.55■■□□□ 1.36
DFFA-201ENST00000377036 XPCQ01831 940 aaPredicted RBP23.55■■□□□ 1.36
DFFA-201ENST00000377036 TNS3Q68CZ2 1445 aa23.54■■□□□ 1.36
DFFA-201ENST00000377036 ABTB2Q8N961 1025 aa23.54■■□□□ 1.36
DFFA-201ENST00000377036 DDX17Q92841 729 aaKnown RBP23.54■■□□□ 1.36
DFFA-201ENST00000377036 SPATA31A3Q5VYP0 1347 aa23.54■■□□□ 1.36
DFFA-201ENST00000377036 AMER1Q5JTC6 1135 aaPredicted RBP23.53■■□□□ 1.36
DFFA-201ENST00000377036 NRKQ7Z2Y5 1582 aa23.52■■□□□ 1.36
DFFA-201ENST00000377036 FYB1O15117 783 aa23.51■■□□□ 1.35
DFFA-201ENST00000377036 NLRP13Q86W25 1043 aa23.51■■□□□ 1.35
DFFA-201ENST00000377036 USP31Q70CQ4 1352 aa23.51■■□□□ 1.35
DFFA-201ENST00000377036 FBXO41Q8TF61 875 aa23.5■■□□□ 1.35
DFFA-201ENST00000377036 COG3Q96JB2 828 aa23.5■■□□□ 1.35
DFFA-201ENST00000377036 NLRP6P59044 892 aa23.49■■□□□ 1.35
DFFA-201ENST00000377036 LMOD2Q6P5Q4 547 aa23.49■■□□□ 1.35
DFFA-201ENST00000377036 NME9Q86XW9 330 aa23.49■■□□□ 1.35
DFFA-201ENST00000377036 TRPM3Q9HCF6 1732 aaPredicted RBP23.48■■□□□ 1.35
DFFA-201ENST00000377036 DIEXFQ68CQ4 756 aaKnown RBP23.46■■□□□ 1.35
DFFA-201ENST00000377036 RALBP1Q15311 655 aa23.45■■□□□ 1.34
DFFA-201ENST00000377036 MORC1Q86VD1 984 aa23.45■■□□□ 1.34
DFFA-201ENST00000377036 GGNBP2Q9H3C7 697 aa23.45■■□□□ 1.34
DFFA-201ENST00000377036 PHLPP1O60346 1717 aa23.45■■□□□ 1.34
DFFA-201ENST00000377036 CC2D1BQ5T0F9 858 aaKnown RBP23.44■■□□□ 1.34
DFFA-201ENST00000377036 KCNH5Q8NCM2 988 aa23.44■■□□□ 1.34
DFFA-201ENST00000377036 COL16A1Q07092 1604 aaPredicted RBP23.43■■□□□ 1.34
DFFA-201ENST00000377036 ANP32CO43423 234 aa23.43■■□□□ 1.34
DFFA-201ENST00000377036 OVOS2A0A0J9YW53 1432 aa23.43■■□□□ 1.34
DFFA-201ENST00000377036 OVOS2Q6IE36 1432 aa23.43■■□□□ 1.34
DFFA-201ENST00000377036 JCADQ9P266 1359 aa23.42■■□□□ 1.34
DFFA-201ENST00000377036 USP19O94966 1318 aa23.42■■□□□ 1.34
DFFA-201ENST00000377036 ALS2Q96Q42 1657 aa23.42■■□□□ 1.34
DFFA-201ENST00000377036 HSPA1LP34931 641 aa23.41■■□□□ 1.34
DFFA-201ENST00000377036 PIK3C2AO00443 1686 aa23.4■■□□□ 1.34
DFFA-201ENST00000377036 NUTM2GQ5VZR2 741 aa23.4■■□□□ 1.34
DFFA-201ENST00000377036 PNPLA6Q8IY17 1366 aa23.4■■□□□ 1.34
DFFA-201ENST00000377036 MED1Q15648 1581 aaPredicted RBP23.4■■□□□ 1.34
DFFA-201ENST00000377036 PARD3Q8TEW0 1356 aa23.39■■□□□ 1.33
DFFA-201ENST00000377036 KIF20BQ96Q89 1820 aa23.38■■□□□ 1.33
DFFA-201ENST00000377036 USP54Q70EL1 1684 aa23.38■■□□□ 1.33
DFFA-201ENST00000377036 AATKQ6ZMQ8 1374 aa23.37■■□□□ 1.33
DFFA-201ENST00000377036 PRKRIP1Q9H875 184 aaPredicted RBP23.37■■□□□ 1.33
DFFA-201ENST00000377036 ZRANB1Q9UGI0 708 aa23.37■■□□□ 1.33
DFFA-201ENST00000377036 GCP02774 474 aa23.36■■□□□ 1.33
DFFA-201ENST00000377036 HAP1P54257 671 aaPredicted RBP23.36■■□□□ 1.33
DFFA-201ENST00000377036 SPATA31A6Q5VVP1 1343 aa23.35■■□□□ 1.33
DFFA-201ENST00000377036 SLIT3O75094 1523 aa23.35■■□□□ 1.33
DFFA-201ENST00000377036 COL22A1Q8NFW1 1626 aaPredicted RBP23.33■■□□□ 1.33
DFFA-201ENST00000377036 CNGB1Q14028 1251 aaPredicted RBP23.33■■□□□ 1.32
DFFA-201ENST00000377036 ANKRD26Q9UPS8 1709 aa23.33■■□□□ 1.32
DFFA-201ENST00000377036 MYBBP1AQ9BQG0 1328 aaKnown RBP23.32■■□□□ 1.32
DFFA-201ENST00000377036 KIF24Q5T7B8 1368 aa23.31■■□□□ 1.32
DFFA-201ENST00000377036 CPDO75976 1380 aa23.31■■□□□ 1.32
DFFA-201ENST00000377036 SHPRHQ149N8 1683 aa23.3■■□□□ 1.32
DFFA-201ENST00000377036 TNNT2P45379 298 aaPredicted RBP23.3■■□□□ 1.32
DFFA-201ENST00000377036 CABLES1Q8TDN4 633 aa23.29■■□□□ 1.32
DFFA-201ENST00000377036 SOX12O15370 315 aa23.27■■□□□ 1.32
DFFA-201ENST00000377036 NFAT5O94916 1531 aa23.27■■□□□ 1.32
DFFA-201ENST00000377036 PPP2R1AP30153 589 aa23.27■■□□□ 1.32
DFFA-201ENST00000377036 RTL1A6NKG5 1358 aa23.26■■□□□ 1.31
DFFA-201ENST00000377036 ARHGEF25Q86VW2 580 aa23.26■■□□□ 1.31
DFFA-201ENST00000377036 PLEKHG5O94827 1062 aa23.25■■□□□ 1.31
DFFA-201ENST00000377036 POLKQ9UBT6 870 aa23.25■■□□□ 1.31
DFFA-201ENST00000377036 MAP3K19Q56UN5 1328 aa23.25■■□□□ 1.31
DFFA-201ENST00000377036 AMPHP49418 695 aa23.25■■□□□ 1.31
DFFA-201ENST00000377036 CFAP53Q96M91 514 aa23.25■■□□□ 1.31
DFFA-201ENST00000377036 PRDM11Q9NQV5 511 aa23.25■■□□□ 1.31
DFFA-201ENST00000377036 SMG6Q86US8 1419 aaKnown RBP23.24■■□□□ 1.31
DFFA-201ENST00000377036 MARF1Q9Y4F3 1742 aaKnown RBP23.24■■□□□ 1.31
DFFA-201ENST00000377036 PHRF1Q9P1Y6 1649 aaKnown RBP23.23■■□□□ 1.31
DFFA-201ENST00000377036 MTHFSP49914 203 aa23.23■■□□□ 1.31
DFFA-201ENST00000377036 ZC3H6P61129 1189 aaKnown RBP23.23■■□□□ 1.31
DFFA-201ENST00000377036 RRS1Q15050 365 aaKnown RBP23.23■■□□□ 1.31
DFFA-201ENST00000377036 ABCC6O95255 1503 aa23.23■■□□□ 1.31
DFFA-201ENST00000377036 FLT4P35916 1363 aa23.22■■□□□ 1.31
DFFA-201ENST00000377036 KIAA0232Q92628 1395 aa23.22■■□□□ 1.31
DFFA-201ENST00000377036 CRYBG1Q9Y4K1 1723 aa23.21■■□□□ 1.31
DFFA-201ENST00000377036 NUTM2BA6NNL0 878 aaPredicted RBP23.21■■□□□ 1.31
DFFA-201ENST00000377036 NUTM2EB1AL46 878 aaPredicted RBP23.21■■□□□ 1.31
DFFA-201ENST00000377036 NUTM2AQ8IVF1 878 aaPredicted RBP23.21■■□□□ 1.31
DFFA-201ENST00000377036 IP6K1Q92551 441 aa23.21■■□□□ 1.31
DFFA-201ENST00000377036 PPM1GO15355 546 aaPredicted RBP23.2■■□□□ 1.3
DFFA-201ENST00000377036 EMILIN1Q9Y6C2 1016 aa23.2■■□□□ 1.3
DFFA-201ENST00000377036 INSRP06213 1382 aa23.2■■□□□ 1.3
DFFA-201ENST00000377036 CDK12Q9NYV4 1490 aaPredicted RBP23.19■■□□□ 1.3
DFFA-201ENST00000377036 BLMP54132 1417 aaPredicted RBP23.18■■□□□ 1.3
DFFA-201ENST00000377036 CCER2I3L3R5 266 aa23.18■■□□□ 1.3
DFFA-201ENST00000377036 FBLN1P23142 703 aa23.18■■□□□ 1.3
DFFA-201ENST00000377036 ABCA3Q99758 1704 aa23.18■■□□□ 1.3
DFFA-201ENST00000377036 HOXC9P31274 260 aa23.17■■□□□ 1.3
DFFA-201ENST00000377036 ZBTB7CA1YPR0 619 aa23.16■■□□□ 1.3
DFFA-201ENST00000377036 ADAMTS2O95450 1211 aa23.16■■□□□ 1.3
DFFA-201ENST00000377036 FAM83GA6ND36 823 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms