RNA–Protein interactions for RNA: ENST00000376809.9

HLA-A-203, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,611 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-203ENST00000376809 NPHP3Q7Z494 1330 aa24.4■■□□□ 1.5
HLA-A-203ENST00000376809 SSH2Q76I76 1423 aa24.4■■□□□ 1.5
HLA-A-203ENST00000376809 CGNL1Q0VF96 1302 aa24.39■■□□□ 1.5
HLA-A-203ENST00000376809 TTC21BQ7Z4L5 1316 aa24.39■■□□□ 1.5
HLA-A-203ENST00000376809 TRPM3Q9HCF6 1732 aaPredicted RBP24.39■■□□□ 1.49
HLA-A-203ENST00000376809 AMER1Q5JTC6 1135 aaPredicted RBP24.39■■□□□ 1.49
HLA-A-203ENST00000376809 KRT28Q7Z3Y7 464 aa24.39■■□□□ 1.49
HLA-A-203ENST00000376809 FBXO41Q8TF61 875 aa24.39■■□□□ 1.49
HLA-A-203ENST00000376809 PAK3O75914 559 aaPredicted RBP24.38■■□□□ 1.49
HLA-A-203ENST00000376809 CC2D1BQ5T0F9 858 aaKnown RBP24.38■■□□□ 1.49
HLA-A-203ENST00000376809 PXDNQ92626 1479 aa24.36■■□□□ 1.49
HLA-A-203ENST00000376809 ANKRD26Q9UPS8 1709 aa24.35■■□□□ 1.49
HLA-A-203ENST00000376809 PIK3C2AO00443 1686 aa24.35■■□□□ 1.49
HLA-A-203ENST00000376809 NME9Q86XW9 330 aa24.35■■□□□ 1.49
HLA-A-203ENST00000376809 BRD4O60885 1362 aaPredicted RBP24.34■■□□□ 1.49
HLA-A-203ENST00000376809 TTC21AQ8NDW8 1320 aa24.34■■□□□ 1.49
HLA-A-203ENST00000376809 FYB1O15117 783 aa24.34■■□□□ 1.49
HLA-A-203ENST00000376809 GGNBP2Q9H3C7 697 aa24.34■■□□□ 1.49
HLA-A-203ENST00000376809 NPC1L1Q9UHC9 1359 aa24.33■■□□□ 1.49
HLA-A-203ENST00000376809 AHDC1Q5TGY3 1603 aaPredicted RBP24.32■■□□□ 1.48
HLA-A-203ENST00000376809 ANP32CO43423 234 aa24.32■■□□□ 1.48
HLA-A-203ENST00000376809 ZRANB1Q9UGI0 708 aa24.32■■□□□ 1.48
HLA-A-203ENST00000376809 ALS2Q96Q42 1657 aa24.31■■□□□ 1.48
HLA-A-203ENST00000376809 NSD2O96028 1365 aa24.31■■□□□ 1.48
HLA-A-203ENST00000376809 PHLPP1O60346 1717 aa24.31■■□□□ 1.48
HLA-A-203ENST00000376809 SOS2Q07890 1332 aaPredicted RBP24.3■■□□□ 1.48
HLA-A-203ENST00000376809 ABTB2Q8N961 1025 aa24.3■■□□□ 1.48
HLA-A-203ENST00000376809 SBNO1A3KN83 1393 aa24.29■■□□□ 1.48
HLA-A-203ENST00000376809 LMOD2Q6P5Q4 547 aa24.29■■□□□ 1.48
HLA-A-203ENST00000376809 NUTM2GQ5VZR2 741 aa24.28■■□□□ 1.48
HLA-A-203ENST00000376809 TNS3Q68CZ2 1445 aa24.28■■□□□ 1.48
HLA-A-203ENST00000376809 PRKRIP1Q9H875 184 aaPredicted RBP24.28■■□□□ 1.48
HLA-A-203ENST00000376809 MARF1Q9Y4F3 1742 aaKnown RBP24.28■■□□□ 1.48
HLA-A-203ENST00000376809 NLRP6P59044 892 aa24.26■■□□□ 1.47
HLA-A-203ENST00000376809 MORC1Q86VD1 984 aa24.26■■□□□ 1.47
HLA-A-203ENST00000376809 PARD3Q8TEW0 1356 aa24.26■■□□□ 1.47
HLA-A-203ENST00000376809 OVOS2A0A0J9YW53 1432 aa24.25■■□□□ 1.47
HLA-A-203ENST00000376809 OVOS2Q6IE36 1432 aa24.25■■□□□ 1.47
HLA-A-203ENST00000376809 USP54Q70EL1 1684 aa24.25■■□□□ 1.47
HLA-A-203ENST00000376809 COG3Q96JB2 828 aa24.25■■□□□ 1.47
HLA-A-203ENST00000376809 SPATA31A3Q5VYP0 1347 aa24.25■■□□□ 1.47
HLA-A-203ENST00000376809 COL16A1Q07092 1604 aaPredicted RBP24.24■■□□□ 1.47
HLA-A-203ENST00000376809 USP31Q70CQ4 1352 aa24.23■■□□□ 1.47
HLA-A-203ENST00000376809 PLEKHG5O94827 1062 aa24.23■■□□□ 1.47
HLA-A-203ENST00000376809 TNNT2P45379 298 aaPredicted RBP24.23■■□□□ 1.47
HLA-A-203ENST00000376809 RALBP1Q15311 655 aa24.23■■□□□ 1.47
HLA-A-203ENST00000376809 MIER1Q8N108 512 aa24.21■■□□□ 1.47
HLA-A-203ENST00000376809 ARHGEF10O15013 1369 aa24.21■■□□□ 1.47
HLA-A-203ENST00000376809 NLRP13Q86W25 1043 aa24.21■■□□□ 1.47
HLA-A-203ENST00000376809 MAP2P11137 1827 aaKnown RBP24.19■■□□□ 1.46
HLA-A-203ENST00000376809 LRRC59Q96AG4 307 aaKnown RBP24.19■■□□□ 1.46
HLA-A-203ENST00000376809 SOX12O15370 315 aa24.18■■□□□ 1.46
HLA-A-203ENST00000376809 MED1Q15648 1581 aaPredicted RBP24.17■■□□□ 1.46
HLA-A-203ENST00000376809 FBLN1P23142 703 aa24.17■■□□□ 1.46
HLA-A-203ENST00000376809 HSPA1LP34931 641 aa24.17■■□□□ 1.46
HLA-A-203ENST00000376809 CRYBG1Q9Y4K1 1723 aa24.17■■□□□ 1.46
HLA-A-203ENST00000376809 PHRF1Q9P1Y6 1649 aaKnown RBP24.16■■□□□ 1.46
HLA-A-203ENST00000376809 MYBBP1AQ9BQG0 1328 aaKnown RBP24.16■■□□□ 1.46
HLA-A-203ENST00000376809 SLIT3O75094 1523 aa24.15■■□□□ 1.46
HLA-A-203ENST00000376809 USP19O94966 1318 aa24.15■■□□□ 1.46
HLA-A-203ENST00000376809 PPP2R1AP30153 589 aa24.14■■□□□ 1.46
HLA-A-203ENST00000376809 ABCA3Q99758 1704 aa24.14■■□□□ 1.45
HLA-A-203ENST00000376809 CABLES1Q8TDN4 633 aa24.13■■□□□ 1.45
HLA-A-203ENST00000376809 PNPLA6Q8IY17 1366 aa24.11■■□□□ 1.45
HLA-A-203ENST00000376809 LTN1O94822 1766 aa24.11■■□□□ 1.45
HLA-A-203ENST00000376809 COL22A1Q8NFW1 1626 aaPredicted RBP24.11■■□□□ 1.45
HLA-A-203ENST00000376809 NFAT5O94916 1531 aa24.11■■□□□ 1.45
HLA-A-203ENST00000376809 AATKQ6ZMQ8 1374 aa24.1■■□□□ 1.45
HLA-A-203ENST00000376809 RRS1Q15050 365 aaKnown RBP24.1■■□□□ 1.45
HLA-A-203ENST00000376809 GCP02774 474 aa24.1■■□□□ 1.45
HLA-A-203ENST00000376809 KCNH5Q8NCM2 988 aa24.1■■□□□ 1.45
HLA-A-203ENST00000376809 SHPRHQ149N8 1683 aa24.09■■□□□ 1.45
HLA-A-203ENST00000376809 JCADQ9P266 1359 aa24.08■■□□□ 1.45
HLA-A-203ENST00000376809 MTHFSP49914 203 aa24.07■■□□□ 1.44
HLA-A-203ENST00000376809 HAP1P54257 671 aaPredicted RBP24.07■■□□□ 1.44
HLA-A-203ENST00000376809 POLKQ9UBT6 870 aa24.07■■□□□ 1.44
HLA-A-203ENST00000376809 EMILIN1Q9Y6C2 1016 aa24.07■■□□□ 1.44
HLA-A-203ENST00000376809 PPM1GO15355 546 aaPredicted RBP24.06■■□□□ 1.44
HLA-A-203ENST00000376809 PEAK1Q9H792 1746 aa24.05■■□□□ 1.44
HLA-A-203ENST00000376809 ZBTB7CA1YPR0 619 aa24.05■■□□□ 1.44
HLA-A-203ENST00000376809 CCDC184Q52MB2 194 aa24.05■■□□□ 1.44
HLA-A-203ENST00000376809 MAP3K19Q56UN5 1328 aa24.05■■□□□ 1.44
HLA-A-203ENST00000376809 ZC3H6P61129 1189 aaKnown RBP24.04■■□□□ 1.44
HLA-A-203ENST00000376809 SMG6Q86US8 1419 aaKnown RBP24.03■■□□□ 1.44
HLA-A-203ENST00000376809 CCER2I3L3R5 266 aa24.02■■□□□ 1.44
HLA-A-203ENST00000376809 MRS2Q9HD23 443 aa24.02■■□□□ 1.44
HLA-A-203ENST00000376809 AMPHP49418 695 aa24■■□□□ 1.43
HLA-A-203ENST00000376809 ARHGEF25Q86VW2 580 aa24■■□□□ 1.43
HLA-A-203ENST00000376809 CDK12Q9NYV4 1490 aaPredicted RBP24■■□□□ 1.43
HLA-A-203ENST00000376809 KIAA0232Q92628 1395 aa23.99■■□□□ 1.43
HLA-A-203ENST00000376809 SPATA31A6Q5VVP1 1343 aa23.99■■□□□ 1.43
HLA-A-203ENST00000376809 RGPD5Q99666 1765 aa23.99■■□□□ 1.43
HLA-A-203ENST00000376809 NUTM2BA6NNL0 878 aaPredicted RBP23.98■■□□□ 1.43
HLA-A-203ENST00000376809 NUTM2EB1AL46 878 aaPredicted RBP23.98■■□□□ 1.43
HLA-A-203ENST00000376809 NUTM2AQ8IVF1 878 aaPredicted RBP23.98■■□□□ 1.43
HLA-A-203ENST00000376809 FLT4P35916 1363 aa23.97■■□□□ 1.43
HLA-A-203ENST00000376809 CFAP53Q96M91 514 aa23.97■■□□□ 1.43
HLA-A-203ENST00000376809 CPDO75976 1380 aa23.97■■□□□ 1.43
HLA-A-203ENST00000376809 HOXC9P31274 260 aa23.95■■□□□ 1.43
HLA-A-203ENST00000376809 CHRNA2Q15822 529 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms