RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 HRCP23327 699 aa19.39■□□□□ 0.69
CLCN6-205ENST00000376492 TULP4Q9NRJ4 1543 aa19.39■□□□□ 0.69
CLCN6-205ENST00000376492 EN1Q05925 392 aaPredicted RBP19.38■□□□□ 0.69
CLCN6-205ENST00000376492 SPATA31A5Q5VU36 1347 aa19.38■□□□□ 0.69
CLCN6-205ENST00000376492 SPATA31A7Q8IWB4 1347 aa19.38■□□□□ 0.69
CLCN6-205ENST00000376492 CRYBG1Q9Y4K1 1723 aa19.36■□□□□ 0.69
CLCN6-205ENST00000376492 THSD7AQ9UPZ6 1657 aa19.36■□□□□ 0.69
CLCN6-205ENST00000376492 EIF3AQ14152 1382 aaKnown RBP19.35■□□□□ 0.69
CLCN6-205ENST00000376492 WASLO00401 505 aaPredicted RBP19.34■□□□□ 0.69
CLCN6-205ENST00000376492 PAK3O75914 559 aaPredicted RBP19.34■□□□□ 0.69
CLCN6-205ENST00000376492 NGDNQ8NEJ9 315 aaKnown RBP19.34■□□□□ 0.69
CLCN6-205ENST00000376492 PRDM11Q9NQV5 511 aa19.34■□□□□ 0.69
CLCN6-205ENST00000376492 RGPD1P0DJD0 1748 aa19.34■□□□□ 0.69
CLCN6-205ENST00000376492 R3HDM1Q15032 1099 aaKnown RBP19.33■□□□□ 0.68
CLCN6-205ENST00000376492 KDM2AQ9Y2K7 1162 aa19.33■□□□□ 0.68
CLCN6-205ENST00000376492 DISP2A7MBM2 1401 aa19.32■□□□□ 0.68
CLCN6-205ENST00000376492 KIAA0232Q92628 1395 aa19.32■□□□□ 0.68
CLCN6-205ENST00000376492 RAB3GAP2Q9H2M9 1393 aa19.32■□□□□ 0.68
CLCN6-205ENST00000376492 TNS1Q9HBL0 1735 aaKnown RBP19.31■□□□□ 0.68
CLCN6-205ENST00000376492 ATP7BP35670 1465 aa19.3■□□□□ 0.68
CLCN6-205ENST00000376492 CHRNA2Q15822 529 aa19.3■□□□□ 0.68
CLCN6-205ENST00000376492 EZH2Q15910 746 aaKnown RBP19.3■□□□□ 0.68
CLCN6-205ENST00000376492 DCAF11Q8TEB1 546 aa19.3■□□□□ 0.68
CLCN6-205ENST00000376492 SPATA31A1Q5TZJ5 1347 aa19.29■□□□□ 0.68
CLCN6-205ENST00000376492 NUTM2GQ5VZR2 741 aa19.28■□□□□ 0.68
CLCN6-205ENST00000376492 STRN4Q9NRL3 753 aa19.28■□□□□ 0.68
CLCN6-205ENST00000376492 TRIM37O94972 964 aa19.27■□□□□ 0.68
CLCN6-205ENST00000376492 PHRF1Q9P1Y6 1649 aaKnown RBP19.26■□□□□ 0.67
CLCN6-205ENST00000376492 ZC3H6P61129 1189 aaKnown RBP19.26■□□□□ 0.67
CLCN6-205ENST00000376492 NUDT16Q96DE0 195 aaKnown RBP19.26■□□□□ 0.67
CLCN6-205ENST00000376492 CAMKK2Q96RR4 588 aa19.25■□□□□ 0.67
CLCN6-205ENST00000376492 USP35Q9P2H5 1018 aa19.25■□□□□ 0.67
CLCN6-205ENST00000376492 ARHGEF28Q8N1W1 1705 aaKnown RBP19.25■□□□□ 0.67
CLCN6-205ENST00000376492 FAM196AQ6ZSG2 479 aa19.23■□□□□ 0.67
CLCN6-205ENST00000376492 ITSN1Q15811 1721 aa19.22■□□□□ 0.67
CLCN6-205ENST00000376492 SSH2Q76I76 1423 aa19.22■□□□□ 0.67
CLCN6-205ENST00000376492 APBA3O96018 575 aa19.21■□□□□ 0.67
CLCN6-205ENST00000376492 CDK19Q9BWU1 502 aa19.21■□□□□ 0.67
CLCN6-205ENST00000376492 POLR3AO14802 1390 aaPredicted RBP19.2■□□□□ 0.66
CLCN6-205ENST00000376492 NRKQ7Z2Y5 1582 aa19.2■□□□□ 0.66
CLCN6-205ENST00000376492 ACEP12821 1306 aa19.2■□□□□ 0.66
CLCN6-205ENST00000376492 LARP1Q6PKG0 1096 aaKnown RBP19.19■□□□□ 0.66
CLCN6-205ENST00000376492 TOPAZ1Q8N9V7 1692 aa19.19■□□□□ 0.66
CLCN6-205ENST00000376492 CAMTA1Q9Y6Y1 1673 aa19.18■□□□□ 0.66
CLCN6-205ENST00000376492 EVA1CP58658 441 aa19.18■□□□□ 0.66
CLCN6-205ENST00000376492 NBPF8Q3BBV2 869 aa19.18■□□□□ 0.66
CLCN6-205ENST00000376492 BARGINQ6ZT62 677 aa19.18■□□□□ 0.66
CLCN6-205ENST00000376492 PARD3Q8TEW0 1356 aa19.18■□□□□ 0.66
CLCN6-205ENST00000376492 PDE3BQ13370 1112 aa19.17■□□□□ 0.66
CLCN6-205ENST00000376492 STAC3Q96MF2 364 aa19.17■□□□□ 0.66
CLCN6-205ENST00000376492 RREB1Q92766 1687 aa19.16■□□□□ 0.66
CLCN6-205ENST00000376492 LMO7Q8WWI1 1683 aa19.15■□□□□ 0.66
CLCN6-205ENST00000376492 TCP11L2Q8N4U5 519 aa19.15■□□□□ 0.66
CLCN6-205ENST00000376492 ABTB2Q8N961 1025 aa19.15■□□□□ 0.66
CLCN6-205ENST00000376492 CCDC61Q9Y6R9 512 aa19.15■□□□□ 0.66
CLCN6-205ENST00000376492 USP19O94966 1318 aa19.15■□□□□ 0.66
CLCN6-205ENST00000376492 CPDO75976 1380 aa19.15■□□□□ 0.66
CLCN6-205ENST00000376492 NUP188Q5SRE5 1749 aa19.14■□□□□ 0.66
CLCN6-205ENST00000376492 PLEKHG3A1L390 1219 aa19.14■□□□□ 0.65
CLCN6-205ENST00000376492 COL5A2P05997 1499 aaPredicted RBP19.11■□□□□ 0.65
CLCN6-205ENST00000376492 PPIP5K1Q6PFW1 1433 aa19.09■□□□□ 0.65
CLCN6-205ENST00000376492 GCP02774 474 aa19.09■□□□□ 0.65
CLCN6-205ENST00000376492 NBPF1Q3BBV0 1214 aa19.09■□□□□ 0.65
CLCN6-205ENST00000376492 NBPF14Q5TI25 921 aa19.09■□□□□ 0.65
CLCN6-205ENST00000376492 THRAP3Q9Y2W1 955 aaKnown RBP19.08■□□□□ 0.64
CLCN6-205ENST00000376492 ZBTB7CA1YPR0 619 aa19.07■□□□□ 0.64
CLCN6-205ENST00000376492 SRPK2P78362 688 aaKnown RBP19.07■□□□□ 0.64
CLCN6-205ENST00000376492 NLRP13Q86W25 1043 aa19.07■□□□□ 0.64
CLCN6-205ENST00000376492 CABP2Q9NPB3 220 aa19.07■□□□□ 0.64
CLCN6-205ENST00000376492 PARP4Q9UKK3 1724 aaKnown RBP19.07■□□□□ 0.64
CLCN6-205ENST00000376492 CRB1P82279 1406 aa19.06■□□□□ 0.64
CLCN6-205ENST00000376492 KIAA1210Q9ULL0 1709 aa19.05■□□□□ 0.64
CLCN6-205ENST00000376492 OVOS2A0A0G2JMS6 1433 aa19.04■□□□□ 0.64
CLCN6-205ENST00000376492 OVOS2A0A0J9YW53 1432 aa19.04■□□□□ 0.64
CLCN6-205ENST00000376492 YY1P25490 414 aa19.04■□□□□ 0.64
CLCN6-205ENST00000376492 OVOS2Q6IE36 1432 aa19.04■□□□□ 0.64
CLCN6-205ENST00000376492 PEAK1Q9H792 1746 aa19.04■□□□□ 0.64
CLCN6-205ENST00000376492 LRRC37A3O60309 1634 aa19.03■□□□□ 0.64
CLCN6-205ENST00000376492 SPON1Q9HCB6 807 aa19.03■□□□□ 0.64
CLCN6-205ENST00000376492 PPP1R1BQ9UD71 204 aaPredicted RBP19.03■□□□□ 0.64
CLCN6-205ENST00000376492 CENPJQ9HC77 1338 aaPredicted RBP19.02■□□□□ 0.64
CLCN6-205ENST00000376492 USP6P35125 1406 aa19.02■□□□□ 0.64
CLCN6-205ENST00000376492 SLIT3O75094 1523 aa19.02■□□□□ 0.64
CLCN6-205ENST00000376492 KCNQ2O43526 872 aa19.02■□□□□ 0.64
CLCN6-205ENST00000376492 PTF1AQ7RTS3 328 aa19.02■□□□□ 0.64
CLCN6-205ENST00000376492 ANO8Q9HCE9 1232 aaPredicted RBP19.02■□□□□ 0.64
CLCN6-205ENST00000376492 AATKQ6ZMQ8 1374 aa19.01■□□□□ 0.63
CLCN6-205ENST00000376492 NLRP6P59044 892 aa19■□□□□ 0.63
CLCN6-205ENST00000376492 CABP1Q9NZU7 370 aa19■□□□□ 0.63
CLCN6-205ENST00000376492 BRD4O60885 1362 aaPredicted RBP18.99■□□□□ 0.63
CLCN6-205ENST00000376492 DDB1Q16531 1140 aa18.99■□□□□ 0.63
CLCN6-205ENST00000376492 TOM1L2Q6ZVM7 507 aa18.99■□□□□ 0.63
CLCN6-205ENST00000376492 QRICH2Q9H0J4 1663 aa18.98■□□□□ 0.63
CLCN6-205ENST00000376492 NINLQ9Y2I6 1382 aa18.98■□□□□ 0.63
CLCN6-205ENST00000376492 C11orf95C9JLR9 678 aaPredicted RBP18.98■□□□□ 0.63
CLCN6-205ENST00000376492 AXIN2Q9Y2T1 843 aa18.98■□□□□ 0.63
CLCN6-205ENST00000376492 PIK3C2AO00443 1686 aa18.98■□□□□ 0.63
CLCN6-205ENST00000376492 PDGFDQ9GZP0 370 aaPredicted RBP18.97■□□□□ 0.63
CLCN6-205ENST00000376492 RGPD3A6NKT7 1758 aaPredicted RBP18.96■□□□□ 0.63
CLCN6-205ENST00000376492 RGPD4Q7Z3J3 1758 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 866.7 ms