RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 CC2D1BQ5T0F9 858 aaKnown RBP31.22■■■□□ 2.59
HLA-C-202ENST00000376237 KRT28Q7Z3Y7 464 aa31.22■■■□□ 2.59
HLA-C-202ENST00000376237 PRKRIP1Q9H875 184 aaPredicted RBP31.22■■■□□ 2.59
HLA-C-202ENST00000376237 RALBP1Q15311 655 aa31.21■■■□□ 2.59
HLA-C-202ENST00000376237 NRKQ7Z2Y5 1582 aa31.21■■■□□ 2.59
HLA-C-202ENST00000376237 UBAP1LF5GYI3 381 aa31.19■■■□□ 2.58
HLA-C-202ENST00000376237 PAK3O75914 559 aaPredicted RBP31.16■■■□□ 2.58
HLA-C-202ENST00000376237 CNGB1Q14028 1251 aaPredicted RBP31.16■■■□□ 2.58
HLA-C-202ENST00000376237 PARD3Q8TEW0 1356 aa31.16■■■□□ 2.58
HLA-C-202ENST00000376237 NME9Q86XW9 330 aa31.15■■■□□ 2.58
HLA-C-202ENST00000376237 GGNBP2Q9H3C7 697 aa31.15■■■□□ 2.58
HLA-C-202ENST00000376237 MORC1Q86VD1 984 aa31.14■■■□□ 2.58
HLA-C-202ENST00000376237 SBNO1A3KN83 1393 aa31.14■■■□□ 2.58
HLA-C-202ENST00000376237 XPCQ01831 940 aaPredicted RBP31.14■■■□□ 2.57
HLA-C-202ENST00000376237 SOS2Q07890 1332 aaPredicted RBP31.13■■■□□ 2.57
HLA-C-202ENST00000376237 DDX17Q92841 729 aaKnown RBP31.13■■■□□ 2.57
HLA-C-202ENST00000376237 COG3Q96JB2 828 aa31.13■■■□□ 2.57
HLA-C-202ENST00000376237 ROBO1Q9Y6N7 1651 aa31.12■■■□□ 2.57
HLA-C-202ENST00000376237 PXDNQ92626 1479 aa31.12■■■□□ 2.57
HLA-C-202ENST00000376237 ABTB2Q8N961 1025 aa31.12■■■□□ 2.57
HLA-C-202ENST00000376237 USP31Q70CQ4 1352 aa31.11■■■□□ 2.57
HLA-C-202ENST00000376237 MIER1Q8N108 512 aa31.1■■■□□ 2.57
HLA-C-202ENST00000376237 KIF20BQ96Q89 1820 aa31.1■■■□□ 2.57
HLA-C-202ENST00000376237 NHSL1Q5SYE7 1610 aa31.09■■■□□ 2.57
HLA-C-202ENST00000376237 PIP4K2BP78356 416 aa31.08■■■□□ 2.57
HLA-C-202ENST00000376237 NLRP6P59044 892 aa31.08■■■□□ 2.57
HLA-C-202ENST00000376237 TRPM3Q9HCF6 1732 aaPredicted RBP31.07■■■□□ 2.56
HLA-C-202ENST00000376237 SCAF1Q9H7N4 1312 aaKnown RBP31.06■■■□□ 2.56
HLA-C-202ENST00000376237 ILDR1Q86SU0 546 aaPredicted RBP31.06■■■□□ 2.56
HLA-C-202ENST00000376237 NLRP13Q86W25 1043 aa31.06■■■□□ 2.56
HLA-C-202ENST00000376237 OVOS2A0A0J9YW53 1432 aa31.06■■■□□ 2.56
HLA-C-202ENST00000376237 OVOS2Q6IE36 1432 aa31.06■■■□□ 2.56
HLA-C-202ENST00000376237 AHDC1Q5TGY3 1603 aaPredicted RBP31.05■■■□□ 2.56
HLA-C-202ENST00000376237 SPATA31A3Q5VYP0 1347 aa31.05■■■□□ 2.56
HLA-C-202ENST00000376237 MYBBP1AQ9BQG0 1328 aaKnown RBP31.05■■■□□ 2.56
HLA-C-202ENST00000376237 ANKRD26Q9UPS8 1709 aa31.05■■■□□ 2.56
HLA-C-202ENST00000376237 TNS3Q68CZ2 1445 aa31.04■■■□□ 2.56
HLA-C-202ENST00000376237 ZRANB1Q9UGI0 708 aa31.04■■■□□ 2.56
HLA-C-202ENST00000376237 PIK3C2AO00443 1686 aa31.04■■■□□ 2.56
HLA-C-202ENST00000376237 ARHGEF10O15013 1369 aa31.03■■■□□ 2.56
HLA-C-202ENST00000376237 LMOD2Q6P5Q4 547 aa31.03■■■□□ 2.56
HLA-C-202ENST00000376237 CCER2I3L3R5 266 aa31■■■□□ 2.55
HLA-C-202ENST00000376237 LRRC59Q96AG4 307 aaKnown RBP31■■■□□ 2.55
HLA-C-202ENST00000376237 PPP2R1AP30153 589 aa30.99■■■□□ 2.55
HLA-C-202ENST00000376237 USP54Q70EL1 1684 aa30.99■■■□□ 2.55
HLA-C-202ENST00000376237 ALS2Q96Q42 1657 aa30.99■■■□□ 2.55
HLA-C-202ENST00000376237 NUTM2GQ5VZR2 741 aa30.98■■■□□ 2.55
HLA-C-202ENST00000376237 AATKQ6ZMQ8 1374 aa30.98■■■□□ 2.55
HLA-C-202ENST00000376237 TNNT2P45379 298 aaPredicted RBP30.98■■■□□ 2.55
HLA-C-202ENST00000376237 KCNH5Q8NCM2 988 aa30.96■■■□□ 2.55
HLA-C-202ENST00000376237 USP19O94966 1318 aa30.94■■■□□ 2.54
HLA-C-202ENST00000376237 PHLPP1O60346 1717 aa30.9■■■□□ 2.54
HLA-C-202ENST00000376237 GCP02774 474 aa30.88■■■□□ 2.53
HLA-C-202ENST00000376237 SLIT3O75094 1523 aa30.88■■■□□ 2.53
HLA-C-202ENST00000376237 MARF1Q9Y4F3 1742 aaKnown RBP30.88■■■□□ 2.53
HLA-C-202ENST00000376237 MTHFSP49914 203 aa30.88■■■□□ 2.53
HLA-C-202ENST00000376237 POLKQ9UBT6 870 aa30.88■■■□□ 2.53
HLA-C-202ENST00000376237 COL16A1Q07092 1604 aaPredicted RBP30.87■■■□□ 2.53
HLA-C-202ENST00000376237 MED1Q15648 1581 aaPredicted RBP30.87■■■□□ 2.53
HLA-C-202ENST00000376237 MRS2Q9HD23 443 aa30.85■■■□□ 2.53
HLA-C-202ENST00000376237 SOX12O15370 315 aa30.84■■■□□ 2.53
HLA-C-202ENST00000376237 FBLN1P23142 703 aa30.84■■■□□ 2.53
HLA-C-202ENST00000376237 CFAP53Q96M91 514 aa30.83■■■□□ 2.53
HLA-C-202ENST00000376237 SMG6Q86US8 1419 aaKnown RBP30.83■■■□□ 2.53
HLA-C-202ENST00000376237 RRS1Q15050 365 aaKnown RBP30.83■■■□□ 2.53
HLA-C-202ENST00000376237 FBXO41Q8TF61 875 aa30.83■■■□□ 2.53
HLA-C-202ENST00000376237 KIF24Q5T7B8 1368 aa30.82■■■□□ 2.53
HLA-C-202ENST00000376237 PNPLA6Q8IY17 1366 aa30.81■■■□□ 2.52
HLA-C-202ENST00000376237 NFAT5O94916 1531 aa30.81■■■□□ 2.52
HLA-C-202ENST00000376237 CCDC184Q52MB2 194 aa30.8■■■□□ 2.52
HLA-C-202ENST00000376237 EMILIN1Q9Y6C2 1016 aa30.8■■■□□ 2.52
HLA-C-202ENST00000376237 MAP3K19Q56UN5 1328 aa30.8■■■□□ 2.52
HLA-C-202ENST00000376237 CABLES1Q8TDN4 633 aa30.79■■■□□ 2.52
HLA-C-202ENST00000376237 INSRP06213 1382 aa30.79■■■□□ 2.52
HLA-C-202ENST00000376237 PPM1GO15355 546 aaPredicted RBP30.78■■■□□ 2.52
HLA-C-202ENST00000376237 PLEKHG5O94827 1062 aa30.78■■■□□ 2.52
HLA-C-202ENST00000376237 HAP1P54257 671 aaPredicted RBP30.78■■■□□ 2.52
HLA-C-202ENST00000376237 MAP2P11137 1827 aaKnown RBP30.77■■■□□ 2.52
HLA-C-202ENST00000376237 AMPHP49418 695 aa30.77■■■□□ 2.52
HLA-C-202ENST00000376237 ARHGEF25Q86VW2 580 aa30.77■■■□□ 2.52
HLA-C-202ENST00000376237 COL22A1Q8NFW1 1626 aaPredicted RBP30.76■■■□□ 2.51
HLA-C-202ENST00000376237 PHRF1Q9P1Y6 1649 aaKnown RBP30.76■■■□□ 2.51
HLA-C-202ENST00000376237 CDK12Q9NYV4 1490 aaPredicted RBP30.76■■■□□ 2.51
HLA-C-202ENST00000376237 CRYBG1Q9Y4K1 1723 aa30.75■■■□□ 2.51
HLA-C-202ENST00000376237 RTL1A6NKG5 1358 aa30.75■■■□□ 2.51
HLA-C-202ENST00000376237 FLT4P35916 1363 aa30.75■■■□□ 2.51
HLA-C-202ENST00000376237 JCADQ9P266 1359 aa30.75■■■□□ 2.51
HLA-C-202ENST00000376237 CPDO75976 1380 aa30.74■■■□□ 2.51
HLA-C-202ENST00000376237 HSPA1LP34931 641 aa30.73■■■□□ 2.51
HLA-C-202ENST00000376237 ZC3H6P61129 1189 aaKnown RBP30.73■■■□□ 2.51
HLA-C-202ENST00000376237 PNISRQ8TF01 805 aaKnown RBP30.71■■■□□ 2.51
HLA-C-202ENST00000376237 IP6K1Q92551 441 aa30.71■■■□□ 2.51
HLA-C-202ENST00000376237 HOXC9P31274 260 aa30.69■■■□□ 2.5
HLA-C-202ENST00000376237 DIAPH1O60610 1272 aaKnown RBP30.68■■■□□ 2.5
HLA-C-202ENST00000376237 NUDCQ9Y266 331 aa30.68■■■□□ 2.5
HLA-C-202ENST00000376237 SHPRHQ149N8 1683 aa30.67■■■□□ 2.5
HLA-C-202ENST00000376237 KIAA0232Q92628 1395 aa30.67■■■□□ 2.5
HLA-C-202ENST00000376237 HSP90AB2PQ58FF8 381 aa30.67■■■□□ 2.5
HLA-C-202ENST00000376237 COL3A1P02461 1466 aaPredicted RBP30.66■■■□□ 2.5
HLA-C-202ENST00000376237 ABCA3Q99758 1704 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms