RNA–Protein interactions for RNA: ENST00000376048.9

PRDM2-204, Transcript of PR/SET domain 2, humanhuman

TSL 2 BASIC

Gene PRDM2, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-204ENST00000376048 PMFBP1Q8TBY8 1022 aa15.17■□□□□ 0.02
PRDM2-204ENST00000376048 UPF2Q9HAU5 1272 aaKnown RBP15.17■□□□□ 0.02
PRDM2-204ENST00000376048 POLR3AO14802 1390 aaPredicted RBP15.16■□□□□ 0.02
PRDM2-204ENST00000376048 PPLO60437 1756 aa15.16■□□□□ 0.02
PRDM2-204ENST00000376048 KIAA1210Q9ULL0 1709 aa15.16■□□□□ 0.02
PRDM2-204ENST00000376048 RUNDC1Q96C34 613 aa15.16■□□□□ 0.02
PRDM2-204ENST00000376048 CAMSAP1Q5T5Y3 1602 aa15.16■□□□□ 0.02
PRDM2-204ENST00000376048 TSPOAP1O95153 1857 aa15.15■□□□□ 0.02
PRDM2-204ENST00000376048 SHPRHQ149N8 1683 aa15.15■□□□□ 0.02
PRDM2-204ENST00000376048 QRICH2Q9H0J4 1663 aa15.15■□□□□ 0.02
PRDM2-204ENST00000376048 XRCC6P12956 609 aaKnown RBP eCLIP15.15■□□□□ 0.02
PRDM2-204ENST00000376048 MFAP1P55081 439 aaKnown RBP15.15■□□□□ 0.02
PRDM2-204ENST00000376048 EVC2Q86UK5 1308 aa15.14■□□□□ 0.01
PRDM2-204ENST00000376048 U2AF1L5P0DN76 240 aaPredicted RBP15.14■□□□□ 0.01
PRDM2-204ENST00000376048 U2AF1Q01081 240 aaKnown RBP eCLIP15.14■□□□□ 0.01
PRDM2-204ENST00000376048 TSR2Q969E8 191 aaKnown RBP15.14■□□□□ 0.01
PRDM2-204ENST00000376048 NEO1Q92859 1461 aa15.14■□□□□ 0.01
PRDM2-204ENST00000376048 TULP4Q9NRJ4 1543 aa15.14■□□□□ 0.01
PRDM2-204ENST00000376048 NINLQ9Y2I6 1382 aa15.14■□□□□ 0.01
PRDM2-204ENST00000376048 NEXMIFQ5QGS0 1516 aa15.14■□□□□ 0.01
PRDM2-204ENST00000376048 U2SURPO15042 1029 aaKnown RBP15.13■□□□□ 0.01
PRDM2-204ENST00000376048 GLI2P10070 1586 aa15.13■□□□□ 0.01
PRDM2-204ENST00000376048 RPGRIP1LQ68CZ1 1315 aa15.13■□□□□ 0.01
PRDM2-204ENST00000376048 A0A1W2PP64 1363 aa15.12■□□□□ 0.01
PRDM2-204ENST00000376048 SBNO2Q9Y2G9 1366 aa15.12■□□□□ 0.01
PRDM2-204ENST00000376048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.12■□□□□ 0.01
PRDM2-204ENST00000376048 RSPH6AQ9H0K4 717 aa15.12■□□□□ 0.01
PRDM2-204ENST00000376048 NCKAP5LQ9HCH0 1330 aa15.12■□□□□ 0.01
PRDM2-204ENST00000376048 NGEFQ8N5V2 710 aa15.12■□□□□ 0.01
PRDM2-204ENST00000376048 PKNOX2Q96KN3 472 aa15.12■□□□□ 0.01
PRDM2-204ENST00000376048 RWDD1Q9H446 243 aaPredicted RBP15.12■□□□□ 0.01
PRDM2-204ENST00000376048 MYO5BQ9ULV0 1848 aa15.11■□□□□ 0.01
PRDM2-204ENST00000376048 DNAJC5Q9H3Z4 198 aa15.11■□□□□ 0.01
PRDM2-204ENST00000376048 MCM4P33991 863 aa15.11■□□□□ 0.01
PRDM2-204ENST00000376048 NEURL4Q96JN8 1562 aa15.11■□□□□ 0.01
PRDM2-204ENST00000376048 MVPQ14764 893 aaKnown RBP15.1■□□□□ 0.01
PRDM2-204ENST00000376048 C22orf23Q9BZE7 217 aa15.1■□□□□ 0.01
PRDM2-204ENST00000376048 CABP1Q9NZU7 370 aa15.1■□□□□ 0.01
PRDM2-204ENST00000376048 PIK3C2BO00750 1634 aa15.1■□□□□ 0.01
PRDM2-204ENST00000376048 IQSEC2Q5JU85 1478 aa15.1■□□□□ 0.01
PRDM2-204ENST00000376048 FTSJ3Q8IY81 847 aaKnown RBP15.1■□□□□ 0.01
PRDM2-204ENST00000376048 RICTORQ6R327 1708 aa15.1■□□□□ 0.01
PRDM2-204ENST00000376048 L1TD1Q5T7N2 865 aaKnown RBP15.1■□□□□ 0.01
PRDM2-204ENST00000376048 SLC52A1Q9NWF4 448 aa15.1■□□□□ 0.01
PRDM2-204ENST00000376048 SETBP1Q9Y6X0 1596 aa15.09■□□□□ 0.01
PRDM2-204ENST00000376048 WDR63Q8IWG1 891 aa15.09■□□□□ 0.01
PRDM2-204ENST00000376048 GOLGA6L3A6NEY3 463 aa15.08■□□□□ 0
PRDM2-204ENST00000376048 CDK19Q9BWU1 502 aa15.08■□□□□ 0
PRDM2-204ENST00000376048 MYO3AQ8NEV4 1616 aa15.08■□□□□ 0
PRDM2-204ENST00000376048 DZIP1LQ8IYY4 767 aaKnown RBP15.08■□□□□ 0
PRDM2-204ENST00000376048 FYB1O15117 783 aa15.07■□□□□ 0
PRDM2-204ENST00000376048 TRIM27P14373 513 aa15.07■□□□□ 0
PRDM2-204ENST00000376048 ZKSCAN2Q63HK3 967 aa15.07■□□□□ 0
PRDM2-204ENST00000376048 ANKRD36BQ8N2N9 1353 aa15.07■□□□□ 0
PRDM2-204ENST00000376048 NUTM2FA1L443 756 aa15.07■□□□□ 0
PRDM2-204ENST00000376048 EXOSC9Q06265 439 aaKnown RBP15.07■□□□□ 0
PRDM2-204ENST00000376048 ITPRIPQ8IWB1 547 aa15.07■□□□□ 0
PRDM2-204ENST00000376048 SMC4Q9NTJ3 1288 aa15.07■□□□□ 0
PRDM2-204ENST00000376048 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
PRDM2-204ENST00000376048 FSD2A1L4K1 749 aa15.06■□□□□ 0
PRDM2-204ENST00000376048 TRAK2O60296 914 aa15.06■□□□□ 0
PRDM2-204ENST00000376048 ARHGEF28Q8N1W1 1705 aaKnown RBP15.05■□□□□ 0
PRDM2-204ENST00000376048 ZC3H13Q5T200 1668 aaKnown RBP15.05■□□□□ -0
PRDM2-204ENST00000376048 TXNDC2Q86VQ3 553 aa15.05■□□□□ -0
PRDM2-204ENST00000376048 SSH1Q8WYL5 1049 aa15.05■□□□□ -0
PRDM2-204ENST00000376048 MYH16Q9H6N6 1097 aa15.04■□□□□ -0
PRDM2-204ENST00000376048 YTHDC2Q9H6S0 1430 aaKnown RBP15.04■□□□□ -0
PRDM2-204ENST00000376048 DIP2BQ9P265 1576 aa15.04■□□□□ -0
PRDM2-204ENST00000376048 HOXD11P31277 338 aaPredicted RBP15.03■□□□□ -0
PRDM2-204ENST00000376048 CFAP53Q96M91 514 aa15.03■□□□□ -0
PRDM2-204ENST00000376048 CHMP5Q9NZZ3 219 aa15.03■□□□□ -0
PRDM2-204ENST00000376048 PTPRMP28827 1452 aa15.03■□□□□ -0
PRDM2-204ENST00000376048 ARHGAP31Q2M1Z3 1444 aa15.02■□□□□ -0
PRDM2-204ENST00000376048 CCDC27Q2M243 656 aa15.02■□□□□ -0
PRDM2-204ENST00000376048 AAMPQ13685 434 aa15.02□□□□□ -0.01
PRDM2-204ENST00000376048 ZNF692Q9BU19 519 aaPredicted RBP15.02□□□□□ -0.01
PRDM2-204ENST00000376048 NOB1Q9ULX3 412 aaKnown RBP15.02□□□□□ -0.01
PRDM2-204ENST00000376048 TMEM131LA2VDJ0 1609 aa15.02□□□□□ -0.01
PRDM2-204ENST00000376048 TMEM57Q8N5G2 664 aa15.01□□□□□ -0.01
PRDM2-204ENST00000376048 LNPKQ9C0E8 428 aa15.01□□□□□ -0.01
PRDM2-204ENST00000376048 NAP1L5Q96NT1 182 aaPredicted RBP15.01□□□□□ -0.01
PRDM2-204ENST00000376048 PREX1Q8TCU6 1659 aa15.01□□□□□ -0.01
PRDM2-204ENST00000376048 HMOX1P09601 288 aa15□□□□□ -0.01
PRDM2-204ENST00000376048 THUMPD2Q9BTF0 503 aaKnown RBP15□□□□□ -0.01
PRDM2-204ENST00000376048 HSCBQ8IWL3 235 aa15□□□□□ -0.01
PRDM2-204ENST00000376048 TRIM35Q9UPQ4 493 aa15□□□□□ -0.01
PRDM2-204ENST00000376048 CD163L1Q9NR16 1453 aa14.99□□□□□ -0.01
PRDM2-204ENST00000376048 CEBPAP49715 358 aaPredicted RBP14.99□□□□□ -0.01
PRDM2-204ENST00000376048 ATF7IPQ6VMQ6 1270 aa14.99□□□□□ -0.01
PRDM2-204ENST00000376048 ZMYM3Q14202 1370 aa14.99□□□□□ -0.01
PRDM2-204ENST00000376048 TMPOP42166 694 aaKnown RBP14.98□□□□□ -0.01
PRDM2-204ENST00000376048 HDAC1Q13547 482 aaPredicted RBP14.98□□□□□ -0.01
PRDM2-204ENST00000376048 NME9Q86XW9 330 aa14.98□□□□□ -0.01
PRDM2-204ENST00000376048 TERF2IPQ9NYB0 399 aa14.98□□□□□ -0.01
PRDM2-204ENST00000376048 EMILIN1Q9Y6C2 1016 aa14.98□□□□□ -0.01
PRDM2-204ENST00000376048 METP08581 1390 aa14.98□□□□□ -0.01
PRDM2-204ENST00000376048 ABCC11Q96J66 1382 aa14.98□□□□□ -0.01
PRDM2-204ENST00000376048 CD2BP2O95400 341 aaKnown RBP14.98□□□□□ -0.01
PRDM2-204ENST00000376048 PNNQ9H307 717 aaKnown RBP14.98□□□□□ -0.01
PRDM2-204ENST00000376048 ERBB4Q15303 1308 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms