RNA–Protein interactions for RNA: ENST00000375323.5

APOA1-204, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-204ENST00000375323 ATRNO75882 1429 aa21.75■■□□□ 1.07
APOA1-204ENST00000375323 CDK12Q9NYV4 1490 aaPredicted RBP21.75■■□□□ 1.07
APOA1-204ENST00000375323 ALS2Q96Q42 1657 aa21.75■■□□□ 1.07
APOA1-204ENST00000375323 FAM83GA6ND36 823 aa21.74■■□□□ 1.07
APOA1-204ENST00000375323 UNC5CLQ8IV45 518 aa21.74■■□□□ 1.07
APOA1-204ENST00000375323 MARF1Q9Y4F3 1742 aaKnown RBP21.74■■□□□ 1.07
APOA1-204ENST00000375323 SLIT2O94813 1529 aa21.74■■□□□ 1.07
APOA1-204ENST00000375323 CLSPNQ9HAW4 1339 aa21.73■■□□□ 1.07
APOA1-204ENST00000375323 NUTM2GQ5VZR2 741 aa21.72■■□□□ 1.07
APOA1-204ENST00000375323 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
APOA1-204ENST00000375323 GJD4Q96KN9 370 aaPredicted RBP21.7■■□□□ 1.06
APOA1-204ENST00000375323 RGS12O14924 1447 aa21.7■■□□□ 1.06
APOA1-204ENST00000375323 ABTB2Q8N961 1025 aa21.69■■□□□ 1.06
APOA1-204ENST00000375323 TIMELESSQ9UNS1 1208 aa21.69■■□□□ 1.06
APOA1-204ENST00000375323 ABCA3Q99758 1704 aa21.69■■□□□ 1.06
APOA1-204ENST00000375323 BRD4O60885 1362 aaPredicted RBP21.67■■□□□ 1.06
APOA1-204ENST00000375323 ATAD2Q6PL18 1390 aa21.66■■□□□ 1.06
APOA1-204ENST00000375323 USP6P35125 1406 aa21.65■■□□□ 1.06
APOA1-204ENST00000375323 ST20-MTHFSA0A0A6YYL1 179 aa21.65■■□□□ 1.06
APOA1-204ENST00000375323 VPS72Q15906 364 aa21.65■■□□□ 1.06
APOA1-204ENST00000375323 NLRP13Q86W25 1043 aa21.65■■□□□ 1.06
APOA1-204ENST00000375323 BTG4Q9NY30 223 aa21.65■■□□□ 1.06
APOA1-204ENST00000375323 ZC3H6P61129 1189 aaKnown RBP21.64■■□□□ 1.05
APOA1-204ENST00000375323 UPF1Q92900 1129 aaKnown RBP eCLIP21.64■■□□□ 1.05
APOA1-204ENST00000375323 ZNF692Q9BU19 519 aaPredicted RBP21.64■■□□□ 1.05
APOA1-204ENST00000375323 PRDM11Q9NQV5 511 aa21.64■■□□□ 1.05
APOA1-204ENST00000375323 CCER1Q8TC90 406 aaPredicted RBP21.63■■□□□ 1.05
APOA1-204ENST00000375323 TESK2Q96S53 571 aa21.63■■□□□ 1.05
APOA1-204ENST00000375323 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.63■■□□□ 1.05
APOA1-204ENST00000375323 USP19O94966 1318 aa21.62■■□□□ 1.05
APOA1-204ENST00000375323 CCDC9Q9Y3X0 531 aaKnown RBP21.62■■□□□ 1.05
APOA1-204ENST00000375323 CRYBG1Q9Y4K1 1723 aa21.62■■□□□ 1.05
APOA1-204ENST00000375323 SSH2Q76I76 1423 aa21.62■■□□□ 1.05
APOA1-204ENST00000375323 KIAA0232Q92628 1395 aa21.61■■□□□ 1.05
APOA1-204ENST00000375323 NLRP6P59044 892 aa21.61■■□□□ 1.05
APOA1-204ENST00000375323 CHRNA2Q15822 529 aa21.61■■□□□ 1.05
APOA1-204ENST00000375323 PLCH1Q4KWH8 1693 aa21.6■■□□□ 1.05
APOA1-204ENST00000375323 CPSF1Q10570 1443 aaKnown RBP21.6■■□□□ 1.05
APOA1-204ENST00000375323 TTC21BQ7Z4L5 1316 aa21.59■■□□□ 1.05
APOA1-204ENST00000375323 GCP02774 474 aa21.59■■□□□ 1.05
APOA1-204ENST00000375323 GLI3P10071 1580 aa21.59■■□□□ 1.05
APOA1-204ENST00000375323 PUS7Q96PZ0 661 aaKnown RBP21.59■■□□□ 1.05
APOA1-204ENST00000375323 NWD2Q9ULI1 1742 aa21.59■■□□□ 1.05
APOA1-204ENST00000375323 TMC1Q8TDI8 760 aa21.58■■□□□ 1.05
APOA1-204ENST00000375323 SLC12A5Q9H2X9 1139 aa21.58■■□□□ 1.05
APOA1-204ENST00000375323 COL14A1Q05707 1796 aaKnown RBP21.58■■□□□ 1.04
APOA1-204ENST00000375323 PHRF1Q9P1Y6 1649 aaKnown RBP21.57■■□□□ 1.04
APOA1-204ENST00000375323 KTN1Q86UP2 1357 aaKnown RBP21.57■■□□□ 1.04
APOA1-204ENST00000375323 SLC24A1O60721 1099 aa21.56■■□□□ 1.04
APOA1-204ENST00000375323 USP47Q96K76 1375 aa21.56■■□□□ 1.04
APOA1-204ENST00000375323 ONECUT3O60422 494 aaPredicted RBP21.55■■□□□ 1.04
APOA1-204ENST00000375323 TTC21AQ8NDW8 1320 aa21.55■■□□□ 1.04
APOA1-204ENST00000375323 CPDO75976 1380 aa21.54■■□□□ 1.04
APOA1-204ENST00000375323 SEPT12Q8IYM1 358 aa21.54■■□□□ 1.04
APOA1-204ENST00000375323 HDGFL2Q7Z4V5 671 aaPredicted RBP21.53■■□□□ 1.04
APOA1-204ENST00000375323 STRN4Q9NRL3 753 aa21.53■■□□□ 1.04
APOA1-204ENST00000375323 SPATA31A5Q5VU36 1347 aa21.53■■□□□ 1.04
APOA1-204ENST00000375323 SPATA31A7Q8IWB4 1347 aa21.53■■□□□ 1.04
APOA1-204ENST00000375323 NRKQ7Z2Y5 1582 aa21.53■■□□□ 1.04
APOA1-204ENST00000375323 CD163L1Q9NR16 1453 aa21.52■■□□□ 1.04
APOA1-204ENST00000375323 NRAPQ86VF7 1730 aa21.52■■□□□ 1.03
APOA1-204ENST00000375323 FAM98CQ17RN3 349 aaKnown RBP21.51■■□□□ 1.03
APOA1-204ENST00000375323 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.51■■□□□ 1.03
APOA1-204ENST00000375323 TERF2IPQ9NYB0 399 aa21.51■■□□□ 1.03
APOA1-204ENST00000375323 AKAP12Q02952 1782 aa21.51■■□□□ 1.03
APOA1-204ENST00000375323 TMF1P82094 1093 aa21.5■■□□□ 1.03
APOA1-204ENST00000375323 PIK3C2AO00443 1686 aa21.5■■□□□ 1.03
APOA1-204ENST00000375323 ZBTB7CA1YPR0 619 aa21.49■■□□□ 1.03
APOA1-204ENST00000375323 EVA1CP58658 441 aa21.49■■□□□ 1.03
APOA1-204ENST00000375323 ZRANB1Q9UGI0 708 aa21.49■■□□□ 1.03
APOA1-204ENST00000375323 SLIT3O75094 1523 aa21.49■■□□□ 1.03
APOA1-204ENST00000375323 CAMTA1Q9Y6Y1 1673 aa21.48■■□□□ 1.03
APOA1-204ENST00000375323 A0A0G2JS52 829 aa21.48■■□□□ 1.03
APOA1-204ENST00000375323 MYT1Q01538 1121 aa21.48■■□□□ 1.03
APOA1-204ENST00000375323 NME9Q86XW9 330 aa21.47■■□□□ 1.03
APOA1-204ENST00000375323 KCNH5Q8NCM2 988 aa21.47■■□□□ 1.03
APOA1-204ENST00000375323 SPATA31A1Q5TZJ5 1347 aa21.47■■□□□ 1.03
APOA1-204ENST00000375323 A0A1W2PP64 1363 aa21.47■■□□□ 1.03
APOA1-204ENST00000375323 SOX12O15370 315 aa21.46■■□□□ 1.03
APOA1-204ENST00000375323 NINLQ9Y2I6 1382 aa21.46■■□□□ 1.03
APOA1-204ENST00000375323 LARP1Q6PKG0 1096 aaKnown RBP21.45■■□□□ 1.02
APOA1-204ENST00000375323 KRT27Q7Z3Y8 459 aa21.45■■□□□ 1.02
APOA1-204ENST00000375323 ARHGEF25Q86VW2 580 aa21.45■■□□□ 1.02
APOA1-204ENST00000375323 AATKQ6ZMQ8 1374 aa21.45■■□□□ 1.02
APOA1-204ENST00000375323 USP31Q70CQ4 1352 aa21.45■■□□□ 1.02
APOA1-204ENST00000375323 EDC4Q6P2E9 1401 aaKnown RBP21.45■■□□□ 1.02
APOA1-204ENST00000375323 MON2Q7Z3U7 1717 aa21.44■■□□□ 1.02
APOA1-204ENST00000375323 LMO7Q8WWI1 1683 aa21.44■■□□□ 1.02
APOA1-204ENST00000375323 USP35Q9P2H5 1018 aa21.43■■□□□ 1.02
APOA1-204ENST00000375323 CDCA8Q53HL2 280 aa21.42■■□□□ 1.02
APOA1-204ENST00000375323 AXIN2Q9Y2T1 843 aa21.42■■□□□ 1.02
APOA1-204ENST00000375323 CCDC125Q86Z20 511 aa21.4■■□□□ 1.02
APOA1-204ENST00000375323 BRWD3Q6RI45 1802 aa21.4■■□□□ 1.02
APOA1-204ENST00000375323 COL5A2P05997 1499 aaPredicted RBP21.39■■□□□ 1.02
APOA1-204ENST00000375323 BARGINQ6ZT62 677 aa21.39■■□□□ 1.01
APOA1-204ENST00000375323 TCP11L2Q8N4U5 519 aa21.38■■□□□ 1.01
APOA1-204ENST00000375323 ANKRD36BQ8N2N9 1353 aa21.37■■□□□ 1.01
APOA1-204ENST00000375323 NFAT5O94916 1531 aa21.37■■□□□ 1.01
APOA1-204ENST00000375323 HSPA5P11021 654 aaKnown RBP21.36■■□□□ 1.01
APOA1-204ENST00000375323 EIF4G2P78344 907 aaKnown RBP eCLIP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms