RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 MNS1Q8NEH6 495 aa17.69■□□□□ 0.42
NOTCH4-201ENST00000375023 ADAMTS8Q9UP79 889 aa17.69■□□□□ 0.42
NOTCH4-201ENST00000375023 OLFM4Q6UX06 510 aa17.69■□□□□ 0.42
NOTCH4-201ENST00000375023 SPC24Q8NBT2 197 aa17.69■□□□□ 0.42
NOTCH4-201ENST00000375023 TSR2Q969E8 191 aaKnown RBP17.69■□□□□ 0.42
NOTCH4-201ENST00000375023 CNNM1Q9NRU3 951 aa17.69■□□□□ 0.42
NOTCH4-201ENST00000375023 CCDC85AQ96PX6 553 aaPredicted RBP17.68■□□□□ 0.42
NOTCH4-201ENST00000375023 PODXL2Q9NZ53 605 aa17.68■□□□□ 0.42
NOTCH4-201ENST00000375023 ZHX3Q9H4I2 956 aa17.68■□□□□ 0.42
NOTCH4-201ENST00000375023 KIF6Q6ZMV9 814 aa17.68■□□□□ 0.42
NOTCH4-201ENST00000375023 TTC39AQ5SRH9 613 aa17.67■□□□□ 0.42
NOTCH4-201ENST00000375023 BRMS1Q9HCU9 246 aa17.67■□□□□ 0.42
NOTCH4-201ENST00000375023 ROCK1Q13464 1354 aa17.67■□□□□ 0.42
NOTCH4-201ENST00000375023 CNTROBQ8N137 903 aa17.67■□□□□ 0.42
NOTCH4-201ENST00000375023 CAVIN1Q6NZI2 390 aaKnown RBP17.67■□□□□ 0.42
NOTCH4-201ENST00000375023 TXNDC2Q86VQ3 553 aa17.66■□□□□ 0.42
NOTCH4-201ENST00000375023 CDK5RAP3Q96JB5 506 aa17.65■□□□□ 0.42
NOTCH4-201ENST00000375023 PRKAR2BP31323 418 aa17.64■□□□□ 0.41
NOTCH4-201ENST00000375023 KRT18P05783 430 aaKnown RBP17.64■□□□□ 0.41
NOTCH4-201ENST00000375023 MATR3P43243 847 aaKnown RBP eCLIP17.64■□□□□ 0.41
NOTCH4-201ENST00000375023 NGLY1Q96IV0 654 aa17.64■□□□□ 0.41
NOTCH4-201ENST00000375023 RSPH6AQ9H0K4 717 aa17.64■□□□□ 0.41
NOTCH4-201ENST00000375023 KIF7Q2M1P5 1343 aa17.63■□□□□ 0.41
NOTCH4-201ENST00000375023 FIBPO43427 364 aa17.63■□□□□ 0.41
NOTCH4-201ENST00000375023 NEK4P51957 841 aa17.63■□□□□ 0.41
NOTCH4-201ENST00000375023 EXOSC9Q06265 439 aaKnown RBP17.63■□□□□ 0.41
NOTCH4-201ENST00000375023 TBC1D2BQ9UPU7 963 aa17.63■□□□□ 0.41
NOTCH4-201ENST00000375023 WASHC2AQ641Q2 1341 aa17.63■□□□□ 0.41
NOTCH4-201ENST00000375023 PRPF40AO75400 957 aaKnown RBP17.63■□□□□ 0.41
NOTCH4-201ENST00000375023 CDC45O75419 566 aa17.63■□□□□ 0.41
NOTCH4-201ENST00000375023 NOB1Q9ULX3 412 aaKnown RBP17.63■□□□□ 0.41
NOTCH4-201ENST00000375023 NINLQ9Y2I6 1382 aa17.63■□□□□ 0.41
NOTCH4-201ENST00000375023 TEX35Q5T0J7 233 aa17.62■□□□□ 0.41
NOTCH4-201ENST00000375023 AK7Q96M32 723 aa17.62■□□□□ 0.41
NOTCH4-201ENST00000375023 TRIM5Q9C035 493 aa17.62■□□□□ 0.41
NOTCH4-201ENST00000375023 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
NOTCH4-201ENST00000375023 HSP90AB4PQ58FF6 505 aa17.62■□□□□ 0.41
NOTCH4-201ENST00000375023 NUP133Q8WUM0 1156 aa17.62■□□□□ 0.41
NOTCH4-201ENST00000375023 XBP1P17861 261 aa17.61■□□□□ 0.41
NOTCH4-201ENST00000375023 NFKBIBQ15653 356 aa17.61■□□□□ 0.41
NOTCH4-201ENST00000375023 CLASRPQ8N2M8 674 aaKnown RBP17.61■□□□□ 0.41
NOTCH4-201ENST00000375023 PRAM1Q96QH2 718 aa17.61■□□□□ 0.41
NOTCH4-201ENST00000375023 FAM177A1Q8N128 213 aaPredicted RBP17.6■□□□□ 0.41
NOTCH4-201ENST00000375023 BCAR3O75815 825 aa17.6■□□□□ 0.41
NOTCH4-201ENST00000375023 NUCB2P80303 420 aa17.6■□□□□ 0.41
NOTCH4-201ENST00000375023 FAM43AQ8N2R8 423 aa17.6■□□□□ 0.41
NOTCH4-201ENST00000375023 TCP11L2Q8N4U5 519 aa17.6■□□□□ 0.41
NOTCH4-201ENST00000375023 CCDC30Q5VVM6 783 aa17.6■□□□□ 0.41
NOTCH4-201ENST00000375023 NASPP49321 788 aaPredicted RBP17.59■□□□□ 0.41
NOTCH4-201ENST00000375023 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
NOTCH4-201ENST00000375023 FKBP4Q02790 459 aaKnown RBP eCLIP17.59■□□□□ 0.41
NOTCH4-201ENST00000375023 CABP4P57796 275 aa17.58■□□□□ 0.41
NOTCH4-201ENST00000375023 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.58■□□□□ 0.41
NOTCH4-201ENST00000375023 RBM10P98175 930 aaKnown RBP17.58■□□□□ 0.4
NOTCH4-201ENST00000375023 VTI1AQ96AJ9 217 aa17.58■□□□□ 0.4
NOTCH4-201ENST00000375023 SART3Q15020 963 aaKnown RBP17.58■□□□□ 0.4
NOTCH4-201ENST00000375023 PSMA5P28066 241 aa17.58■□□□□ 0.4
NOTCH4-201ENST00000375023 PDZRN3Q9UPQ7 1066 aa17.58■□□□□ 0.4
NOTCH4-201ENST00000375023 AFAP1Q8N556 730 aa17.57■□□□□ 0.4
NOTCH4-201ENST00000375023 TWISTNBQ3B726 338 aaPredicted RBP17.57■□□□□ 0.4
NOTCH4-201ENST00000375023 SULT6B1Q6IMI4 303 aa17.57■□□□□ 0.4
NOTCH4-201ENST00000375023 CADPSQ9ULU8 1353 aa17.57■□□□□ 0.4
NOTCH4-201ENST00000375023 SCLT1Q96NL6 688 aa17.56■□□□□ 0.4
NOTCH4-201ENST00000375023 PLCD4Q9BRC7 762 aa17.56■□□□□ 0.4
NOTCH4-201ENST00000375023 RRS1Q15050 365 aaKnown RBP17.56■□□□□ 0.4
NOTCH4-201ENST00000375023 TANGO6Q9C0B7 1094 aa17.56■□□□□ 0.4
NOTCH4-201ENST00000375023 NAT10Q9H0A0 1025 aaKnown RBP17.56■□□□□ 0.4
NOTCH4-201ENST00000375023 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
NOTCH4-201ENST00000375023 MAGEC2Q9UBF1 373 aaPredicted RBP17.55■□□□□ 0.4
NOTCH4-201ENST00000375023 MAP7D2Q96T17 732 aa17.55■□□□□ 0.4
NOTCH4-201ENST00000375023 CCDC158Q5M9N0 1113 aa17.54■□□□□ 0.4
NOTCH4-201ENST00000375023 ANKRD62A6NC57 917 aa17.54■□□□□ 0.4
NOTCH4-201ENST00000375023 KINO60870 393 aaKnown RBP17.54■□□□□ 0.4
NOTCH4-201ENST00000375023 WDHD1O75717 1129 aaPredicted RBP17.54■□□□□ 0.4
NOTCH4-201ENST00000375023 GPRASP1Q5JY77 1395 aa17.54■□□□□ 0.4
NOTCH4-201ENST00000375023 SEPT11Q9NVA2 429 aaKnown RBP17.54■□□□□ 0.4
NOTCH4-201ENST00000375023 CCDC7Q96M83 1385 aa17.54■□□□□ 0.4
NOTCH4-201ENST00000375023 SSBP05455 408 aaKnown RBP eCLIP17.53■□□□□ 0.4
NOTCH4-201ENST00000375023 STK38Q15208 465 aa17.53■□□□□ 0.4
NOTCH4-201ENST00000375023 NBPF1Q3BBV0 1214 aa17.53■□□□□ 0.4
NOTCH4-201ENST00000375023 PLEKHO1Q53GL0 409 aaPredicted RBP17.53■□□□□ 0.4
NOTCH4-201ENST00000375023 HSP90B2PQ58FF3 399 aa17.53■□□□□ 0.4
NOTCH4-201ENST00000375023 HDGFL1Q5TGJ6 251 aa17.53■□□□□ 0.4
NOTCH4-201ENST00000375023 SLC12A5Q9H2X9 1139 aa17.53■□□□□ 0.4
NOTCH4-201ENST00000375023 SYCP1Q15431 976 aa17.53■□□□□ 0.4
NOTCH4-201ENST00000375023 TRAK2O60296 914 aa17.53■□□□□ 0.4
NOTCH4-201ENST00000375023 MIA2Q96PC5 1412 aa17.53■□□□□ 0.4
NOTCH4-201ENST00000375023 C11orf95C9JLR9 678 aaPredicted RBP17.52■□□□□ 0.4
NOTCH4-201ENST00000375023 CNTLNQ9NXG0 1405 aa17.52■□□□□ 0.4
NOTCH4-201ENST00000375023 NEFHP12036 1026 aa17.52■□□□□ 0.4
NOTCH4-201ENST00000375023 ZC3H6P61129 1189 aaKnown RBP17.52■□□□□ 0.4
NOTCH4-201ENST00000375023 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.4
NOTCH4-201ENST00000375023 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.52■□□□□ 0.4
NOTCH4-201ENST00000375023 TRMT1LQ7Z2T5 733 aaKnown RBP17.52■□□□□ 0.4
NOTCH4-201ENST00000375023 FANCD2Q9BXW9 1451 aa17.52■□□□□ 0.4
NOTCH4-201ENST00000375023 CCDC173Q0VFZ6 552 aa17.52■□□□□ 0.39
NOTCH4-201ENST00000375023 PDCL3Q9H2J4 239 aa17.52■□□□□ 0.39
NOTCH4-201ENST00000375023 ARGLU1Q9NWB6 273 aaPredicted RBP17.52■□□□□ 0.39
NOTCH4-201ENST00000375023 TATP17735 454 aaPredicted RBP17.51■□□□□ 0.39
NOTCH4-201ENST00000375023 CDK19Q9BWU1 502 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms