RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 TOPAZ1Q8N9V7 1692 aa18.37■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 CCDC27Q2M243 656 aa18.37■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 DUSP27Q5VZP5 1158 aa18.37■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 MON2Q7Z3U7 1717 aa18.37■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 SSH2Q76I76 1423 aa18.37■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 KIF20BQ96Q89 1820 aa18.36■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 ACEP12821 1306 aa18.36■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 SLFN5Q08AF3 891 aa18.36■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 POLKQ9UBT6 870 aa18.36■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 AKAP12Q02952 1782 aa18.35■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 TTC21BQ7Z4L5 1316 aa18.35■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 COG3Q96JB2 828 aa18.34■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 NPHP4O75161 1426 aaPredicted RBP18.34■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 USP6P35125 1406 aa18.34■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 IQSEC2Q5JU85 1478 aa18.34■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 NME9Q86XW9 330 aa18.34■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 E9PSI1 815 aa18.33■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 DIAPH1O60610 1272 aaKnown RBP18.33■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 WWC1Q8IX03 1113 aa18.33■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 TCP11L2Q8N4U5 519 aa18.32■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 PNNQ9H307 717 aaKnown RBP18.32■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 TTC21AQ8NDW8 1320 aa18.32■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 RRP1P56182 461 aaKnown RBP18.31■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 IRX6P78412 446 aaPredicted RBP18.31■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 PLEKHF1Q96S99 279 aa18.31■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 NKTRP30414 1462 aaKnown RBP18.31■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 CHD2O14647 1828 aaKnown RBP18.31■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 AEBP2Q6ZN18 517 aaPredicted RBP18.31■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 WDR63Q8IWG1 891 aa18.31■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 NRKQ7Z2Y5 1582 aa18.29■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 CDK12Q9NYV4 1490 aaPredicted RBP18.29■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 ITSN1Q15811 1721 aa18.29■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 USP31Q70CQ4 1352 aa18.29■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 FCHSD2O94868 740 aa18.29■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 OVOS2A0A0J9YW53 1432 aa18.29■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 OVOS2Q6IE36 1432 aa18.29■□□□□ 0.52
NIPSNAP3A-201ENST00000374767 ZRANB1Q9UGI0 708 aa18.27■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 SPINK5Q9NQ38 1064 aaPredicted RBP18.26■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 ADGRL3Q9HAR2 1447 aa18.25■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 NUTM2FA1L443 756 aa18.25■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 IL13P35225 146 aa18.25■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 U2SURPO15042 1029 aaKnown RBP18.24■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 NGDNQ8NEJ9 315 aaKnown RBP18.24■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 EMILIN1Q9Y6C2 1016 aa18.24■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 FMN2Q9NZ56 1722 aa18.24■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 NWD1Q149M9 1564 aa18.24■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 FBLN1P23142 703 aa18.23■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 PMFBP1Q8TBY8 1022 aa18.23■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 TMPOP42166 694 aaKnown RBP18.22■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 RSPH6AQ9H0K4 717 aa18.22■□□□□ 0.51
NIPSNAP3A-201ENST00000374767 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 IL16Q14005 1332 aa18.2■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 PPM1GO15355 546 aaPredicted RBP18.2■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 RRP7AQ9Y3A4 280 aaKnown RBP18.2■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 RRS1Q15050 365 aaKnown RBP18.19■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 PHF8Q9UPP1 1060 aa18.19■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 LRRC7Q96NW7 1537 aa18.18■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 NALCNQ8IZF0 1738 aa18.18■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 NEUROD2Q15784 382 aa18.18■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 TRIM35Q9UPQ4 493 aa18.18■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.17■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 NCOA3Q9Y6Q9 1424 aa18.17■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 KIF24Q5T7B8 1368 aa18.17■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 MYH16Q9H6N6 1097 aa18.16■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 CT47B1P0C2W7 299 aaPredicted RBP18.16■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 NEFMP07197 916 aa18.15■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 PRKAR2BP31323 418 aa18.15■□□□□ 0.5
NIPSNAP3A-201ENST00000374767 RIPK4P57078 832 aa18.14■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 B4GALNT3Q6L9W6 998 aa18.13■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 USP54Q70EL1 1684 aa18.13■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 RGPD8O14715 1765 aaPredicted RBP18.13■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 EIF4A2Q14240 407 aaKnown RBP18.12■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 NFE2L2Q16236 605 aa18.12■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 PROSER2Q86WR7 435 aaPredicted RBP18.12■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 C19orf44Q9H6X5 657 aa18.12■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 SBNO1A3KN83 1393 aa18.12■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 EXOC6Q8TAG9 804 aa18.12■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 MAP3K19Q56UN5 1328 aa18.11■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 NLRP6P59044 892 aa18.11■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 FLT4P35916 1363 aa18.11■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 PIK3C2AO00443 1686 aa18.1■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 KDM4FA0A1W2PPD8 638 aa18.1■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 PLIN1O60240 522 aa18.1■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 CCDC136Q96JN2 1154 aa18.1■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 PHACTR3Q96KR7 559 aa18.1■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 HSP90AB2PQ58FF8 381 aa18.09■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 RBM33Q96EV2 1170 aaKnown RBP18.09■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 HMOX1P09601 288 aa18.09■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 CALD1Q05682 793 aaKnown RBP18.09■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 ESCO1Q5FWF5 840 aa18.09■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 ABTB2Q8N961 1025 aa18.09■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 DCCP43146 1447 aa18.08■□□□□ 0.49
NIPSNAP3A-201ENST00000374767 RARSP54136 660 aaKnown RBP18.08■□□□□ 0.48
NIPSNAP3A-201ENST00000374767 PDE3AQ14432 1141 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms