RNA–Protein interactions for RNA: ENST00000374704.7

CCNY-203, Transcript of cyclin Y, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCNY, Length 3,960 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-203ENST00000374704 ARHGEF12Q9NZN5 1544 aa16.43■□□□□ 0.22
CCNY-203ENST00000374704 CEP170Q5SW79 1584 aa16.42■□□□□ 0.22
CCNY-203ENST00000374704 ST18O60284 1047 aa16.42■□□□□ 0.22
CCNY-203ENST00000374704 LMOD3Q0VAK6 560 aa16.42■□□□□ 0.22
CCNY-203ENST00000374704 CFAP65Q6ZU64 1925 aaKnown RBP16.42■□□□□ 0.22
CCNY-203ENST00000374704 ADGRL1O94910 1474 aa16.42■□□□□ 0.22
CCNY-203ENST00000374704 MAP4K4O95819 1239 aaPredicted RBP16.42■□□□□ 0.22
CCNY-203ENST00000374704 C16orf71Q8IYS4 520 aaPredicted RBP16.42■□□□□ 0.22
CCNY-203ENST00000374704 ITSN2Q9NZM3 1697 aa16.42■□□□□ 0.22
CCNY-203ENST00000374704 PLCH2O75038 1416 aa16.41■□□□□ 0.22
CCNY-203ENST00000374704 HMMRO75330 724 aa16.41■□□□□ 0.22
CCNY-203ENST00000374704 PRPF40AO75400 957 aaKnown RBP16.4■□□□□ 0.22
CCNY-203ENST00000374704 EXOC6BQ9Y2D4 811 aa16.4■□□□□ 0.22
CCNY-203ENST00000374704 RBM33Q96EV2 1170 aaKnown RBP16.4■□□□□ 0.22
CCNY-203ENST00000374704 FANCAO15360 1455 aa16.4■□□□□ 0.22
CCNY-203ENST00000374704 CDC45O75419 566 aa16.4■□□□□ 0.22
CCNY-203ENST00000374704 MCCP23508 829 aa16.4■□□□□ 0.22
CCNY-203ENST00000374704 NEK4P51957 841 aa16.4■□□□□ 0.22
CCNY-203ENST00000374704 ATAD2Q6PL18 1390 aa16.39■□□□□ 0.21
CCNY-203ENST00000374704 SSFA2P28290 1259 aa16.39■□□□□ 0.21
CCNY-203ENST00000374704 BLMP54132 1417 aaPredicted RBP16.38■□□□□ 0.21
CCNY-203ENST00000374704 RSPH6AQ9H0K4 717 aa16.38■□□□□ 0.21
CCNY-203ENST00000374704 FGD1P98174 961 aa16.38■□□□□ 0.21
CCNY-203ENST00000374704 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
CCNY-203ENST00000374704 ABCC10Q5T3U5 1492 aa16.38■□□□□ 0.21
CCNY-203ENST00000374704 TNPO1Q92973 898 aaKnown RBP16.38■□□□□ 0.21
CCNY-203ENST00000374704 LARP6Q9BRS8 491 aaKnown RBP16.38■□□□□ 0.21
CCNY-203ENST00000374704 BCL11BQ9C0K0 894 aaPredicted RBP16.38■□□□□ 0.21
CCNY-203ENST00000374704 FCHSD2O94868 740 aa16.37■□□□□ 0.21
CCNY-203ENST00000374704 GRPEL1Q9HAV7 217 aa16.37■□□□□ 0.21
CCNY-203ENST00000374704 XRCC6P12956 609 aaKnown RBP eCLIP16.37■□□□□ 0.211e-6■■■□□ 17.2
CCNY-203ENST00000374704 NFE2L2Q16236 605 aa16.37■□□□□ 0.21
CCNY-203ENST00000374704 ZNF521Q96K83 1311 aa16.37■□□□□ 0.21
CCNY-203ENST00000374704 NUP160Q12769 1436 aa16.37■□□□□ 0.21
CCNY-203ENST00000374704 DTNBO60941 627 aa16.36■□□□□ 0.21
CCNY-203ENST00000374704 HDGFP51858 240 aaKnown RBP16.36■□□□□ 0.21
CCNY-203ENST00000374704 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
CCNY-203ENST00000374704 C8orf58Q8NAV2 365 aa16.36■□□□□ 0.21
CCNY-203ENST00000374704 IL1RAPL2Q9NP60 686 aa16.36■□□□□ 0.21
CCNY-203ENST00000374704 MRE11P49959 708 aa16.36■□□□□ 0.21
CCNY-203ENST00000374704 HAP1P54257 671 aaPredicted RBP16.36■□□□□ 0.21
CCNY-203ENST00000374704 TBC1D9Q6ZT07 1266 aa16.36■□□□□ 0.21
CCNY-203ENST00000374704 MBIPQ9NS73 344 aa16.36■□□□□ 0.21
CCNY-203ENST00000374704 ZNF330Q9Y3S2 320 aaPredicted RBP16.36■□□□□ 0.21
CCNY-203ENST00000374704 ZMYM4Q5VZL5 1548 aa16.35■□□□□ 0.21
CCNY-203ENST00000374704 NASPP49321 788 aaPredicted RBP16.35■□□□□ 0.21
CCNY-203ENST00000374704 AAMPQ13685 434 aa16.35■□□□□ 0.21
CCNY-203ENST00000374704 HSP90AA2PQ14568 343 aaPredicted RBP16.35■□□□□ 0.21
CCNY-203ENST00000374704 K7ELQ4 463 aaPredicted RBP16.35■□□□□ 0.21
CCNY-203ENST00000374704 NLRP6P59044 892 aa16.35■□□□□ 0.21
CCNY-203ENST00000374704 INTS3Q68E01 1043 aaKnown RBP16.35■□□□□ 0.21
CCNY-203ENST00000374704 DDX54Q8TDD1 881 aaKnown RBP16.35■□□□□ 0.21
CCNY-203ENST00000374704 SHANK2Q9UPX8 1470 aa16.34■□□□□ 0.21
CCNY-203ENST00000374704 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
CCNY-203ENST00000374704 NUDT16Q96DE0 195 aaKnown RBP16.34■□□□□ 0.21
CCNY-203ENST00000374704 UPF3BQ9BZI7 483 aaKnown RBP16.34■□□□□ 0.21
CCNY-203ENST00000374704 FAM43AQ8N2R8 423 aa16.34■□□□□ 0.21
CCNY-203ENST00000374704 TRIM35Q9UPQ4 493 aa16.34■□□□□ 0.21
CCNY-203ENST00000374704 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
CCNY-203ENST00000374704 SLC52A1Q9NWF4 448 aa16.33■□□□□ 0.2
CCNY-203ENST00000374704 UGGT1Q9NYU2 1555 aa16.33■□□□□ 0.2
CCNY-203ENST00000374704 PIK3C2GO75747 1445 aa16.32■□□□□ 0.2
CCNY-203ENST00000374704 DUOX2Q9NRD8 1548 aa16.32■□□□□ 0.2
CCNY-203ENST00000374704 CCDC27Q2M243 656 aa16.32■□□□□ 0.2
CCNY-203ENST00000374704 POLR3AO14802 1390 aaPredicted RBP16.32■□□□□ 0.2
CCNY-203ENST00000374704 WDR7Q9Y4E6 1490 aa16.32■□□□□ 0.2
CCNY-203ENST00000374704 REC8O95072 547 aa16.32■□□□□ 0.2
CCNY-203ENST00000374704 POLKQ9UBT6 870 aa16.32■□□□□ 0.2
CCNY-203ENST00000374704 GOLGA6L4A6NEF3 574 aa16.31■□□□□ 0.2
CCNY-203ENST00000374704 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
CCNY-203ENST00000374704 OTUD7AQ8TE49 926 aaPredicted RBP16.31■□□□□ 0.2
CCNY-203ENST00000374704 CD109Q6YHK3 1445 aa16.31■□□□□ 0.2
CCNY-203ENST00000374704 AIMP1Q12904 312 aaKnown RBP16.31■□□□□ 0.2
CCNY-203ENST00000374704 FAM13BQ9NYF5 915 aa16.31■□□□□ 0.2
CCNY-203ENST00000374704 RTEL1-TNFRSF6BF6WH68 1400 aa16.31■□□□□ 0.2
CCNY-203ENST00000374704 TRMT2AQ8IZ69 625 aaKnown RBP16.3■□□□□ 0.2
CCNY-203ENST00000374704 SURF6O75683 361 aaKnown RBP16.3■□□□□ 0.2
CCNY-203ENST00000374704 NINLQ9Y2I6 1382 aa16.3■□□□□ 0.2
CCNY-203ENST00000374704 RBM10P98175 930 aaKnown RBP16.3■□□□□ 0.2
CCNY-203ENST00000374704 ZBTB40Q9NUA8 1239 aa16.3■□□□□ 0.2
CCNY-203ENST00000374704 SKOR2Q2VWA4 1001 aaPredicted RBP16.29■□□□□ 0.2
CCNY-203ENST00000374704 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
CCNY-203ENST00000374704 HSP90AB2PQ58FF8 381 aa16.29■□□□□ 0.2
CCNY-203ENST00000374704 GDPD2Q9HCC8 539 aa16.29■□□□□ 0.2
CCNY-203ENST00000374704 A0A1W2PP64 1363 aa16.29■□□□□ 0.2
CCNY-203ENST00000374704 NUCB1Q02818 461 aa16.28■□□□□ 0.2
CCNY-203ENST00000374704 MEIS3Q99687 375 aa16.28■□□□□ 0.2
CCNY-203ENST00000374704 FOXO3O43524 673 aa16.28■□□□□ 0.2
CCNY-203ENST00000374704 CT47B1P0C2W7 299 aaPredicted RBP16.28■□□□□ 0.2
CCNY-203ENST00000374704 DRC7Q8IY82 874 aa16.28■□□□□ 0.2
CCNY-203ENST00000374704 CHAMP1Q96JM3 812 aa16.28■□□□□ 0.2
CCNY-203ENST00000374704 RRAGDQ9NQL2 400 aaPredicted RBP16.28■□□□□ 0.2
CCNY-203ENST00000374704 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
CCNY-203ENST00000374704 RPGRIP1LQ68CZ1 1315 aa16.28■□□□□ 0.2
CCNY-203ENST00000374704 ESPNB1AK53 854 aa16.27■□□□□ 0.2
CCNY-203ENST00000374704 PRKCSHP14314 528 aaPredicted RBP16.27■□□□□ 0.2
CCNY-203ENST00000374704 FOSBP53539 338 aa16.27■□□□□ 0.2
CCNY-203ENST00000374704 NUTM1Q86Y26 1132 aa16.27■□□□□ 0.2
CCNY-203ENST00000374704 R3HCC1Q9Y3T6 440 aaKnown RBP16.27■□□□□ 0.2
CCNY-203ENST00000374704 VAMP4O75379 141 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms