RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 RLBP1P12271 317 aa22.9■■□□□ 1.26
PHF1-201ENST00000374512 U2AF1L5P0DN76 240 aaPredicted RBP22.89■■□□□ 1.26
PHF1-201ENST00000374512 U2AF1Q01081 240 aaKnown RBP eCLIP22.89■■□□□ 1.26
PHF1-201ENST00000374512 ANKRD26Q9UPS8 1709 aa22.89■■□□□ 1.25
PHF1-201ENST00000374512 MVPQ14764 893 aaKnown RBP22.89■■□□□ 1.25
PHF1-201ENST00000374512 ZKSCAN2Q63HK3 967 aa22.89■■□□□ 1.25
PHF1-201ENST00000374512 MED14O60244 1454 aa22.88■■□□□ 1.25
PHF1-201ENST00000374512 PRAM1Q96QH2 718 aa22.88■■□□□ 1.25
PHF1-201ENST00000374512 TERF2IPQ9NYB0 399 aa22.88■■□□□ 1.25
PHF1-201ENST00000374512 POGKQ9P215 609 aa22.88■■□□□ 1.25
PHF1-201ENST00000374512 FRAT2O75474 233 aaPredicted RBP22.86■■□□□ 1.25
PHF1-201ENST00000374512 IL27Q8NEV9 243 aa22.86■■□□□ 1.25
PHF1-201ENST00000374512 PDZRN3Q9UPQ7 1066 aa22.86■■□□□ 1.25
PHF1-201ENST00000374512 IL16Q14005 1332 aa22.86■■□□□ 1.25
PHF1-201ENST00000374512 A2ML1A8K2U0 1454 aa22.86■■□□□ 1.25
PHF1-201ENST00000374512 SEC24BO95487 1268 aa22.86■■□□□ 1.25
PHF1-201ENST00000374512 MINK1Q8N4C8 1332 aaPredicted RBP22.86■■□□□ 1.25
PHF1-201ENST00000374512 DZIP1LQ8IYY4 767 aaKnown RBP22.85■■□□□ 1.25
PHF1-201ENST00000374512 SENP3Q9H4L4 574 aaPredicted RBP22.85■■□□□ 1.25
PHF1-201ENST00000374512 TBC1D32Q96NH3 1257 aa22.84■■□□□ 1.25
PHF1-201ENST00000374512 CD163L1Q9NR16 1453 aa22.83■■□□□ 1.25
PHF1-201ENST00000374512 MLECQ14165 292 aa22.83■■□□□ 1.25
PHF1-201ENST00000374512 GGNBP2Q9H3C7 697 aa22.83■■□□□ 1.25
PHF1-201ENST00000374512 COL3A1P02461 1466 aaPredicted RBP22.83■■□□□ 1.24
PHF1-201ENST00000374512 FTSJ3Q8IY81 847 aaKnown RBP22.82■■□□□ 1.24
PHF1-201ENST00000374512 PLEKHF1Q96S99 279 aa22.82■■□□□ 1.24
PHF1-201ENST00000374512 PNNQ9H307 717 aaKnown RBP22.82■■□□□ 1.24
PHF1-201ENST00000374512 BCL2L13Q9BXK5 485 aa22.81■■□□□ 1.24
PHF1-201ENST00000374512 RIMS2Q9UQ26 1411 aa22.81■■□□□ 1.24
PHF1-201ENST00000374512 FYB1O15117 783 aa22.81■■□□□ 1.24
PHF1-201ENST00000374512 HDAC1Q13547 482 aaPredicted RBP22.8■■□□□ 1.24
PHF1-201ENST00000374512 HDGFL2Q7Z4V5 671 aaPredicted RBP22.8■■□□□ 1.24
PHF1-201ENST00000374512 TNNQ9UQP3 1299 aa22.8■■□□□ 1.24
PHF1-201ENST00000374512 TMPOP42166 694 aaKnown RBP22.8■■□□□ 1.24
PHF1-201ENST00000374512 DDX19BQ9UMR2 479 aa22.8■■□□□ 1.24
PHF1-201ENST00000374512 DLC1Q96QB1 1528 aa22.79■■□□□ 1.24
PHF1-201ENST00000374512 SETD1AO15047 1707 aaKnown RBP22.78■■□□□ 1.24
PHF1-201ENST00000374512 KIF20BQ96Q89 1820 aa22.78■■□□□ 1.24
PHF1-201ENST00000374512 CDK19Q9BWU1 502 aa22.78■■□□□ 1.24
PHF1-201ENST00000374512 U2SURPO15042 1029 aaKnown RBP22.77■■□□□ 1.24
PHF1-201ENST00000374512 ESF1Q9H501 851 aaKnown RBP22.77■■□□□ 1.24
PHF1-201ENST00000374512 SMC4Q9NTJ3 1288 aa22.77■■□□□ 1.24
PHF1-201ENST00000374512 ANTXR1Q9H6X2 564 aa22.76■■□□□ 1.23
PHF1-201ENST00000374512 TRIM35Q9UPQ4 493 aa22.76■■□□□ 1.23
PHF1-201ENST00000374512 EXOSC9Q06265 439 aaKnown RBP22.75■■□□□ 1.23
PHF1-201ENST00000374512 ATF7IPQ6VMQ6 1270 aa22.75■■□□□ 1.23
PHF1-201ENST00000374512 PNPLA6Q8IY17 1366 aa22.75■■□□□ 1.23
PHF1-201ENST00000374512 TRIM27P14373 513 aa22.73■■□□□ 1.23
PHF1-201ENST00000374512 KIF16BQ96L93 1317 aa22.73■■□□□ 1.23
PHF1-201ENST00000374512 IPO8O15397 1037 aaKnown RBP22.73■■□□□ 1.23
PHF1-201ENST00000374512 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.73■■□□□ 1.23
PHF1-201ENST00000374512 TSR2Q969E8 191 aaKnown RBP22.73■■□□□ 1.23
PHF1-201ENST00000374512 CABP1Q9NZU7 370 aa22.73■■□□□ 1.23
PHF1-201ENST00000374512 CDC42BPGQ6DT37 1551 aa22.72■■□□□ 1.23
PHF1-201ENST00000374512 SSH1Q8WYL5 1049 aa22.72■■□□□ 1.23
PHF1-201ENST00000374512 ZNF428Q96B54 188 aa22.72■■□□□ 1.23
PHF1-201ENST00000374512 BRPF3Q9ULD4 1205 aa22.72■■□□□ 1.23
PHF1-201ENST00000374512 DIAPH1O60610 1272 aaKnown RBP22.71■■□□□ 1.23
PHF1-201ENST00000374512 ALDH1L2Q3SY69 923 aa22.71■■□□□ 1.23
PHF1-201ENST00000374512 SMC5Q8IY18 1101 aa22.71■■□□□ 1.23
PHF1-201ENST00000374512 TBC1D2Q9BYX2 928 aa22.71■■□□□ 1.23
PHF1-201ENST00000374512 NRXN3Q9Y4C0 1643 aa22.71■■□□□ 1.23
PHF1-201ENST00000374512 ATP7BP35670 1465 aa22.7■■□□□ 1.22
PHF1-201ENST00000374512 FCHSD2O94868 740 aa22.68■■□□□ 1.22
PHF1-201ENST00000374512 RIPK4P57078 832 aa22.68■■□□□ 1.22
PHF1-201ENST00000374512 BRPF1P55201 1214 aaPredicted RBP22.67■■□□□ 1.22
PHF1-201ENST00000374512 ITPRIPQ8IWB1 547 aa22.67■■□□□ 1.22
PHF1-201ENST00000374512 SLKQ9H2G2 1235 aaPredicted RBP22.67■■□□□ 1.22
PHF1-201ENST00000374512 HDGFP51858 240 aaKnown RBP22.66■■□□□ 1.22
PHF1-201ENST00000374512 ZBTB40Q9NUA8 1239 aa22.66■■□□□ 1.22
PHF1-201ENST00000374512 NOB1Q9ULX3 412 aaKnown RBP22.66■■□□□ 1.22
PHF1-201ENST00000374512 WAPLQ7Z5K2 1190 aa22.66■■□□□ 1.22
PHF1-201ENST00000374512 C22orf23Q9BZE7 217 aa22.66■■□□□ 1.22
PHF1-201ENST00000374512 TNRQ92752 1358 aa22.66■■□□□ 1.22
PHF1-201ENST00000374512 PPIP5K1Q6PFW1 1433 aa22.66■■□□□ 1.22
PHF1-201ENST00000374512 CHMP4BQ9H444 224 aaKnown RBP22.65■■□□□ 1.22
PHF1-201ENST00000374512 RTN4Q9NQC3 1192 aaKnown RBP22.63■■□□□ 1.21
PHF1-201ENST00000374512 KNDC1Q76NI1 1749 aa22.63■■□□□ 1.21
PHF1-201ENST00000374512 L1TD1Q5T7N2 865 aaKnown RBP22.62■■□□□ 1.21
PHF1-201ENST00000374512 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.62■■□□□ 1.21
PHF1-201ENST00000374512 TMEM57Q8N5G2 664 aa22.62■■□□□ 1.21
PHF1-201ENST00000374512 MAP2P11137 1827 aaKnown RBP22.62■■□□□ 1.21
PHF1-201ENST00000374512 UBR1Q8IWV7 1749 aa22.61■■□□□ 1.21
PHF1-201ENST00000374512 CALD1Q05682 793 aaKnown RBP22.61■■□□□ 1.21
PHF1-201ENST00000374512 METP08581 1390 aa22.61■■□□□ 1.21
PHF1-201ENST00000374512 LRRC7Q96NW7 1537 aa22.61■■□□□ 1.21
PHF1-201ENST00000374512 NUCB1Q02818 461 aa22.6■■□□□ 1.21
PHF1-201ENST00000374512 FAM135BQ49AJ0 1406 aa22.6■■□□□ 1.21
PHF1-201ENST00000374512 POLKQ9UBT6 870 aa22.6■■□□□ 1.21
PHF1-201ENST00000374512 SIRT1Q96EB6 747 aa22.59■■□□□ 1.21
PHF1-201ENST00000374512 ARHGAP45Q92619 1136 aa22.59■■□□□ 1.21
PHF1-201ENST00000374512 DNAJC5Q9H3Z4 198 aa22.59■■□□□ 1.21
PHF1-201ENST00000374512 CHMP5Q9NZZ3 219 aa22.59■■□□□ 1.21
PHF1-201ENST00000374512 TECPR2O15040 1411 aa22.59■■□□□ 1.21
PHF1-201ENST00000374512 EDC4Q6P2E9 1401 aaKnown RBP22.59■■□□□ 1.21
PHF1-201ENST00000374512 CPSF1Q10570 1443 aaKnown RBP22.58■■□□□ 1.21
PHF1-201ENST00000374512 WASLO00401 505 aaPredicted RBP22.58■■□□□ 1.2
PHF1-201ENST00000374512 TMEM2Q9UHN6 1383 aa22.58■■□□□ 1.2
PHF1-201ENST00000374512 FAM43AQ8N2R8 423 aa22.57■■□□□ 1.2
PHF1-201ENST00000374512 RSPH6AQ9H0K4 717 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms