RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 TNS3Q68CZ2 1445 aa15.55■□□□□ 0.08
CSGALNACT2-201ENST00000374466 PLCH1Q4KWH8 1693 aa15.54■□□□□ 0.08
CSGALNACT2-201ENST00000374466 PLPPR3Q6T4P5 718 aa15.54■□□□□ 0.08
CSGALNACT2-201ENST00000374466 NCAPD2Q15021 1401 aa15.52■□□□□ 0.08
CSGALNACT2-201ENST00000374466 NRAPQ86VF7 1730 aa15.52■□□□□ 0.08
CSGALNACT2-201ENST00000374466 STK26Q9P289 416 aa15.52■□□□□ 0.07
CSGALNACT2-201ENST00000374466 WNK3Q9BYP7 1800 aa15.52■□□□□ 0.07
CSGALNACT2-201ENST00000374466 COL14A1Q05707 1796 aaKnown RBP15.51■□□□□ 0.07
CSGALNACT2-201ENST00000374466 ARHGEF10O15013 1369 aa15.51■□□□□ 0.07
CSGALNACT2-201ENST00000374466 BCANQ96GW7 911 aa15.51■□□□□ 0.07
CSGALNACT2-201ENST00000374466 TERF2IPQ9NYB0 399 aa15.5■□□□□ 0.07
CSGALNACT2-201ENST00000374466 MINK1Q8N4C8 1332 aaPredicted RBP15.5■□□□□ 0.07
CSGALNACT2-201ENST00000374466 CGNL1Q0VF96 1302 aa15.5■□□□□ 0.07
CSGALNACT2-201ENST00000374466 LTN1O94822 1766 aa15.49■□□□□ 0.07
CSGALNACT2-201ENST00000374466 CPDO75976 1380 aa15.49■□□□□ 0.07
CSGALNACT2-201ENST00000374466 RTL1A6NKG5 1358 aa15.49■□□□□ 0.07
CSGALNACT2-201ENST00000374466 COL3A1P02461 1466 aaPredicted RBP15.49■□□□□ 0.07
CSGALNACT2-201ENST00000374466 ATF3P18847 181 aa15.48■□□□□ 0.07
CSGALNACT2-201ENST00000374466 AMER1Q5JTC6 1135 aaPredicted RBP15.48■□□□□ 0.07
CSGALNACT2-201ENST00000374466 BRINP3Q76B58 766 aa15.48■□□□□ 0.07
CSGALNACT2-201ENST00000374466 SLAIN2Q9P270 581 aa15.48■□□□□ 0.07
CSGALNACT2-201ENST00000374466 NPHP3Q7Z494 1330 aa15.48■□□□□ 0.07
CSGALNACT2-201ENST00000374466 PHF8Q9UPP1 1060 aa15.47■□□□□ 0.07
CSGALNACT2-201ENST00000374466 CDK12Q9NYV4 1490 aaPredicted RBP15.47■□□□□ 0.07
CSGALNACT2-201ENST00000374466 PEAK1Q9H792 1746 aa15.47■□□□□ 0.07
CSGALNACT2-201ENST00000374466 PNPLA6Q8IY17 1366 aa15.47■□□□□ 0.07
CSGALNACT2-201ENST00000374466 NSD3Q9BZ95 1437 aa15.46■□□□□ 0.07
CSGALNACT2-201ENST00000374466 CARD14Q9BXL6 1004 aa15.45■□□□□ 0.06
CSGALNACT2-201ENST00000374466 ACEP12821 1306 aa15.45■□□□□ 0.06
CSGALNACT2-201ENST00000374466 SPATA31A3Q5VYP0 1347 aa15.44■□□□□ 0.06
CSGALNACT2-201ENST00000374466 TOM1O60784 492 aa15.44■□□□□ 0.06
CSGALNACT2-201ENST00000374466 CABP2Q9NPB3 220 aa15.44■□□□□ 0.06
CSGALNACT2-201ENST00000374466 HDGFL2Q7Z4V5 671 aaPredicted RBP15.44■□□□□ 0.06
CSGALNACT2-201ENST00000374466 TTC21BQ7Z4L5 1316 aa15.43■□□□□ 0.06
CSGALNACT2-201ENST00000374466 PSME1Q06323 249 aa15.43■□□□□ 0.06
CSGALNACT2-201ENST00000374466 MAP2P11137 1827 aaKnown RBP15.42■□□□□ 0.06
CSGALNACT2-201ENST00000374466 RALBP1Q15311 655 aa15.41■□□□□ 0.06
CSGALNACT2-201ENST00000374466 CABP1Q9NZU7 370 aa15.41■□□□□ 0.06
CSGALNACT2-201ENST00000374466 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
CSGALNACT2-201ENST00000374466 ADAMTS7Q9UKP4 1686 aa15.4■□□□□ 0.06
CSGALNACT2-201ENST00000374466 BLMP54132 1417 aaPredicted RBP15.4■□□□□ 0.06
CSGALNACT2-201ENST00000374466 SLC12A5Q9H2X9 1139 aa15.38■□□□□ 0.05
CSGALNACT2-201ENST00000374466 PANK3Q9H999 370 aa15.38■□□□□ 0.05
CSGALNACT2-201ENST00000374466 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
CSGALNACT2-201ENST00000374466 PKD1L3Q7Z443 1732 aa15.37■□□□□ 0.05
CSGALNACT2-201ENST00000374466 PARP4Q9UKK3 1724 aaKnown RBP15.36■□□□□ 0.05
CSGALNACT2-201ENST00000374466 FYB1O15117 783 aa15.35■□□□□ 0.05
CSGALNACT2-201ENST00000374466 SPATA31A6Q5VVP1 1343 aa15.35■□□□□ 0.05
CSGALNACT2-201ENST00000374466 JCADQ9P266 1359 aa15.35■□□□□ 0.05
CSGALNACT2-201ENST00000374466 HIRIP3Q9BW71 556 aaPredicted RBP15.34■□□□□ 0.05
CSGALNACT2-201ENST00000374466 ORAI2Q96SN7 254 aa15.34■□□□□ 0.05
CSGALNACT2-201ENST00000374466 CCER2I3L3R5 266 aa15.33■□□□□ 0.05
CSGALNACT2-201ENST00000374466 SLIT2O94813 1529 aa15.33■□□□□ 0.05
CSGALNACT2-201ENST00000374466 KRT28Q7Z3Y7 464 aa15.32■□□□□ 0.04
CSGALNACT2-201ENST00000374466 KCNH5Q8NCM2 988 aa15.32■□□□□ 0.04
CSGALNACT2-201ENST00000374466 LRRC59Q96AG4 307 aaKnown RBP15.31■□□□□ 0.04
CSGALNACT2-201ENST00000374466 FBXO41Q8TF61 875 aa15.31■□□□□ 0.04
CSGALNACT2-201ENST00000374466 THSD7AQ9UPZ6 1657 aa15.31■□□□□ 0.04
CSGALNACT2-201ENST00000374466 ESCO1Q5FWF5 840 aa15.3■□□□□ 0.04
CSGALNACT2-201ENST00000374466 MYBBP1AQ9BQG0 1328 aaKnown RBP15.3■□□□□ 0.04
CSGALNACT2-201ENST00000374466 SHANK3Q9BYB0 1731 aa15.29■□□□□ 0.04
CSGALNACT2-201ENST00000374466 RGPD5Q99666 1765 aa15.29■□□□□ 0.04
CSGALNACT2-201ENST00000374466 LRP6O75581 1613 aa15.29■□□□□ 0.04
CSGALNACT2-201ENST00000374466 SAFB2Q14151 953 aaKnown RBP eCLIP15.29■□□□□ 0.04
CSGALNACT2-201ENST00000374466 PRKRIP1Q9H875 184 aaPredicted RBP15.29■□□□□ 0.04
CSGALNACT2-201ENST00000374466 KNSTRNQ9Y448 316 aa15.29■□□□□ 0.04
CSGALNACT2-201ENST00000374466 CICQ96RK0 1608 aaPredicted RBP15.29■□□□□ 0.04
CSGALNACT2-201ENST00000374466 LRRC37A3O60309 1634 aa15.27■□□□□ 0.04
CSGALNACT2-201ENST00000374466 NLRP13Q86W25 1043 aa15.27■□□□□ 0.04
CSGALNACT2-201ENST00000374466 NGDNQ8NEJ9 315 aaKnown RBP15.26■□□□□ 0.03
CSGALNACT2-201ENST00000374466 KDRP35968 1356 aa15.26■□□□□ 0.03
CSGALNACT2-201ENST00000374466 C14orf37Q86TY3 774 aa15.26■□□□□ 0.03
CSGALNACT2-201ENST00000374466 FLT4P35916 1363 aa15.25■□□□□ 0.03
CSGALNACT2-201ENST00000374466 ARHGEF25Q86VW2 580 aa15.24■□□□□ 0.03
CSGALNACT2-201ENST00000374466 COL5A2P05997 1499 aaPredicted RBP15.23■□□□□ 0.03
CSGALNACT2-201ENST00000374466 ZNF831Q5JPB2 1677 aa15.23■□□□□ 0.03
CSGALNACT2-201ENST00000374466 OVOS2A0A0G2JMS6 1433 aa15.22■□□□□ 0.03
CSGALNACT2-201ENST00000374466 COG3Q96JB2 828 aa15.22■□□□□ 0.03
CSGALNACT2-201ENST00000374466 DISP2A7MBM2 1401 aa15.22■□□□□ 0.03
CSGALNACT2-201ENST00000374466 BCL9O00512 1426 aa15.22■□□□□ 0.03
CSGALNACT2-201ENST00000374466 UBAP1LF5GYI3 381 aa15.21■□□□□ 0.03
CSGALNACT2-201ENST00000374466 SIPA1L3O60292 1781 aaPredicted RBP15.21■□□□□ 0.03
CSGALNACT2-201ENST00000374466 PPP2R1AP30153 589 aa15.21■□□□□ 0.03
CSGALNACT2-201ENST00000374466 RGPD2P0DJD1 1756 aa15.2■□□□□ 0.02
CSGALNACT2-201ENST00000374466 NME9Q86XW9 330 aa15.2■□□□□ 0.02
CSGALNACT2-201ENST00000374466 PMFBP1Q8TBY8 1022 aa15.2■□□□□ 0.02
CSGALNACT2-201ENST00000374466 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
CSGALNACT2-201ENST00000374466 ATRNO75882 1429 aa15.2■□□□□ 0.02
CSGALNACT2-201ENST00000374466 DDX10Q13206 875 aaKnown RBP15.19■□□□□ 0.02
CSGALNACT2-201ENST00000374466 IP6K1Q92551 441 aa15.19■□□□□ 0.02
CSGALNACT2-201ENST00000374466 RBM33Q96EV2 1170 aaKnown RBP15.19■□□□□ 0.02
CSGALNACT2-201ENST00000374466 FOXO3O43524 673 aa15.19■□□□□ 0.02
CSGALNACT2-201ENST00000374466 RGPD3A6NKT7 1758 aaPredicted RBP15.19■□□□□ 0.02
CSGALNACT2-201ENST00000374466 RGPD4Q7Z3J3 1758 aa15.19■□□□□ 0.02
CSGALNACT2-201ENST00000374466 PAPPAQ13219 1627 aa15.18■□□□□ 0.02
CSGALNACT2-201ENST00000374466 POLKQ9UBT6 870 aa15.18■□□□□ 0.02
CSGALNACT2-201ENST00000374466 VIRMAQ69YN4 1812 aaKnown RBP15.17■□□□□ 0.02
CSGALNACT2-201ENST00000374466 FNBP4Q8N3X1 1017 aaPredicted RBP15.17■□□□□ 0.02
CSGALNACT2-201ENST00000374466 GCP02774 474 aa15.17■□□□□ 0.02
CSGALNACT2-201ENST00000374466 MRC1P22897 1456 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms