RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 TTC21BQ7Z4L5 1316 aa23.93■■□□□ 1.42
C9orf43-202ENST00000374165 KIF1AQ12756 1690 aa23.92■■□□□ 1.42
C9orf43-202ENST00000374165 NPC1L1Q9UHC9 1359 aa23.91■■□□□ 1.42
C9orf43-202ENST00000374165 YTHDC1Q96MU7 727 aaKnown RBP23.9■■□□□ 1.42
C9orf43-202ENST00000374165 PARD3Q8TEW0 1356 aa23.9■■□□□ 1.42
C9orf43-202ENST00000374165 KIF20BQ96Q89 1820 aa23.89■■□□□ 1.42
C9orf43-202ENST00000374165 CERKQ8TCT0 537 aa23.88■■□□□ 1.41
C9orf43-202ENST00000374165 PAK3O75914 559 aaPredicted RBP23.88■■□□□ 1.41
C9orf43-202ENST00000374165 KRT28Q7Z3Y7 464 aa23.88■■□□□ 1.41
C9orf43-202ENST00000374165 TNNT2P45379 298 aaPredicted RBP23.86■■□□□ 1.41
C9orf43-202ENST00000374165 RALBP1Q15311 655 aa23.85■■□□□ 1.41
C9orf43-202ENST00000374165 CCDC184Q52MB2 194 aa23.85■■□□□ 1.41
C9orf43-202ENST00000374165 PIK3C2AO00443 1686 aa23.85■■□□□ 1.41
C9orf43-202ENST00000374165 NUTM2GQ5VZR2 741 aa23.84■■□□□ 1.41
C9orf43-202ENST00000374165 ROBO1Q9Y6N7 1651 aa23.84■■□□□ 1.41
C9orf43-202ENST00000374165 TRPM3Q9HCF6 1732 aaPredicted RBP23.84■■□□□ 1.41
C9orf43-202ENST00000374165 FBLN1P23142 703 aa23.84■■□□□ 1.41
C9orf43-202ENST00000374165 MORC1Q86VD1 984 aa23.84■■□□□ 1.41
C9orf43-202ENST00000374165 NPHP3Q7Z494 1330 aa23.83■■□□□ 1.41
C9orf43-202ENST00000374165 ANKRD26Q9UPS8 1709 aa23.83■■□□□ 1.41
C9orf43-202ENST00000374165 NSD2O96028 1365 aa23.83■■□□□ 1.4
C9orf43-202ENST00000374165 ABTB2Q8N961 1025 aa23.83■■□□□ 1.4
C9orf43-202ENST00000374165 TTC21AQ8NDW8 1320 aa23.82■■□□□ 1.4
C9orf43-202ENST00000374165 PXDNQ92626 1479 aa23.82■■□□□ 1.4
C9orf43-202ENST00000374165 TOM1O60784 492 aa23.82■■□□□ 1.4
C9orf43-202ENST00000374165 UBAP1LF5GYI3 381 aa23.81■■□□□ 1.4
C9orf43-202ENST00000374165 PIP4K2BP78356 416 aa23.81■■□□□ 1.4
C9orf43-202ENST00000374165 MARF1Q9Y4F3 1742 aaKnown RBP23.79■■□□□ 1.4
C9orf43-202ENST00000374165 CENPBP07199 599 aaPredicted RBP23.79■■□□□ 1.4
C9orf43-202ENST00000374165 PPP2R1AP30153 589 aa23.79■■□□□ 1.4
C9orf43-202ENST00000374165 IQSEC2Q5JU85 1478 aa23.79■■□□□ 1.4
C9orf43-202ENST00000374165 NLRP6P59044 892 aa23.79■■□□□ 1.4
C9orf43-202ENST00000374165 NHSL1Q5SYE7 1610 aa23.79■■□□□ 1.4
C9orf43-202ENST00000374165 MYBBP1AQ9BQG0 1328 aaKnown RBP23.79■■□□□ 1.4
C9orf43-202ENST00000374165 OVOS2A0A0J9YW53 1432 aa23.78■■□□□ 1.4
C9orf43-202ENST00000374165 OVOS2Q6IE36 1432 aa23.78■■□□□ 1.4
C9orf43-202ENST00000374165 LMOD2Q6P5Q4 547 aa23.78■■□□□ 1.4
C9orf43-202ENST00000374165 COG3Q96JB2 828 aa23.78■■□□□ 1.4
C9orf43-202ENST00000374165 SOS2Q07890 1332 aaPredicted RBP23.78■■□□□ 1.4
C9orf43-202ENST00000374165 BRD4O60885 1362 aaPredicted RBP23.77■■□□□ 1.4
C9orf43-202ENST00000374165 ALS2Q96Q42 1657 aa23.76■■□□□ 1.39
C9orf43-202ENST00000374165 USP31Q70CQ4 1352 aa23.76■■□□□ 1.39
C9orf43-202ENST00000374165 SCAF1Q9H7N4 1312 aaKnown RBP23.76■■□□□ 1.39
C9orf43-202ENST00000374165 PLEKHG5O94827 1062 aa23.76■■□□□ 1.39
C9orf43-202ENST00000374165 CCER2I3L3R5 266 aa23.74■■□□□ 1.39
C9orf43-202ENST00000374165 SOX12O15370 315 aa23.74■■□□□ 1.39
C9orf43-202ENST00000374165 MAP2P11137 1827 aaKnown RBP23.74■■□□□ 1.39
C9orf43-202ENST00000374165 SBNO1A3KN83 1393 aa23.73■■□□□ 1.39
C9orf43-202ENST00000374165 SPATA31A3Q5VYP0 1347 aa23.73■■□□□ 1.39
C9orf43-202ENST00000374165 NLRP13Q86W25 1043 aa23.72■■□□□ 1.39
C9orf43-202ENST00000374165 TNS3Q68CZ2 1445 aa23.71■■□□□ 1.39
C9orf43-202ENST00000374165 MTHFSP49914 203 aa23.71■■□□□ 1.39
C9orf43-202ENST00000374165 USP54Q70EL1 1684 aa23.7■■□□□ 1.39
C9orf43-202ENST00000374165 RRS1Q15050 365 aaKnown RBP23.7■■□□□ 1.38
C9orf43-202ENST00000374165 MRS2Q9HD23 443 aa23.7■■□□□ 1.38
C9orf43-202ENST00000374165 AHDC1Q5TGY3 1603 aaPredicted RBP23.69■■□□□ 1.38
C9orf43-202ENST00000374165 POLKQ9UBT6 870 aa23.69■■□□□ 1.38
C9orf43-202ENST00000374165 CABLES1Q8TDN4 633 aa23.68■■□□□ 1.38
C9orf43-202ENST00000374165 EMILIN1Q9Y6C2 1016 aa23.67■■□□□ 1.38
C9orf43-202ENST00000374165 MED1Q15648 1581 aaPredicted RBP23.67■■□□□ 1.38
C9orf43-202ENST00000374165 PHLPP1O60346 1717 aa23.66■■□□□ 1.38
C9orf43-202ENST00000374165 AATKQ6ZMQ8 1374 aa23.65■■□□□ 1.38
C9orf43-202ENST00000374165 PPM1GO15355 546 aaPredicted RBP23.65■■□□□ 1.38
C9orf43-202ENST00000374165 USP19O94966 1318 aa23.64■■□□□ 1.38
C9orf43-202ENST00000374165 GCP02774 474 aa23.64■■□□□ 1.37
C9orf43-202ENST00000374165 COL16A1Q07092 1604 aaPredicted RBP23.63■■□□□ 1.37
C9orf43-202ENST00000374165 ARHGEF10O15013 1369 aa23.63■■□□□ 1.37
C9orf43-202ENST00000374165 CRYBG1Q9Y4K1 1723 aa23.62■■□□□ 1.37
C9orf43-202ENST00000374165 LRRC59Q96AG4 307 aaKnown RBP23.62■■□□□ 1.37
C9orf43-202ENST00000374165 MAP3K19Q56UN5 1328 aa23.62■■□□□ 1.37
C9orf43-202ENST00000374165 SLIT3O75094 1523 aa23.61■■□□□ 1.37
C9orf43-202ENST00000374165 NFAT5O94916 1531 aa23.61■■□□□ 1.37
C9orf43-202ENST00000374165 PEAK1Q9H792 1746 aa23.6■■□□□ 1.37
C9orf43-202ENST00000374165 PNISRQ8TF01 805 aaKnown RBP23.59■■□□□ 1.37
C9orf43-202ENST00000374165 LTN1O94822 1766 aa23.59■■□□□ 1.37
C9orf43-202ENST00000374165 PHRF1Q9P1Y6 1649 aaKnown RBP23.58■■□□□ 1.37
C9orf43-202ENST00000374165 KCNH5Q8NCM2 988 aa23.58■■□□□ 1.37
C9orf43-202ENST00000374165 SMG6Q86US8 1419 aaKnown RBP23.58■■□□□ 1.36
C9orf43-202ENST00000374165 ZC3H6P61129 1189 aaKnown RBP23.57■■□□□ 1.36
C9orf43-202ENST00000374165 FAM9BQ8IZU0 186 aa23.57■■□□□ 1.36
C9orf43-202ENST00000374165 PNPLA6Q8IY17 1366 aa23.57■■□□□ 1.36
C9orf43-202ENST00000374165 HSP90AB2PQ58FF8 381 aa23.56■■□□□ 1.36
C9orf43-202ENST00000374165 COL3A1P02461 1466 aaPredicted RBP23.55■■□□□ 1.36
C9orf43-202ENST00000374165 ABCA3Q99758 1704 aa23.54■■□□□ 1.36
C9orf43-202ENST00000374165 ZBTB7CA1YPR0 619 aa23.54■■□□□ 1.36
C9orf43-202ENST00000374165 ARHGEF25Q86VW2 580 aa23.54■■□□□ 1.36
C9orf43-202ENST00000374165 SHPRHQ149N8 1683 aa23.53■■□□□ 1.36
C9orf43-202ENST00000374165 CDK12Q9NYV4 1490 aaPredicted RBP23.53■■□□□ 1.36
C9orf43-202ENST00000374165 HSPA1LP34931 641 aa23.52■■□□□ 1.36
C9orf43-202ENST00000374165 AMPHP49418 695 aa23.52■■□□□ 1.36
C9orf43-202ENST00000374165 INSRP06213 1382 aa23.51■■□□□ 1.35
C9orf43-202ENST00000374165 HOXC9P31274 260 aa23.51■■□□□ 1.35
C9orf43-202ENST00000374165 CFAP53Q96M91 514 aa23.51■■□□□ 1.35
C9orf43-202ENST00000374165 AXIN2Q9Y2T1 843 aa23.5■■□□□ 1.35
C9orf43-202ENST00000374165 COL22A1Q8NFW1 1626 aaPredicted RBP23.5■■□□□ 1.35
C9orf43-202ENST00000374165 ADAMTS8Q9UP79 889 aa23.5■■□□□ 1.35
C9orf43-202ENST00000374165 FLT4P35916 1363 aa23.49■■□□□ 1.35
C9orf43-202ENST00000374165 KIAA0232Q92628 1395 aa23.49■■□□□ 1.35
C9orf43-202ENST00000374165 RGPD5Q99666 1765 aa23.49■■□□□ 1.35
C9orf43-202ENST00000374165 CHRNA2Q15822 529 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms