RNA–Protein interactions for RNA: ENST00000373826.3

RAB42-201, Transcript of RAB42, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB42, Length 1,950 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42-201ENST00000373826 CLEC17AQ6ZS10 378 aa16.65■□□□□ 0.26
RAB42-201ENST00000373826 ZSCAN30Q86W11 494 aa16.65■□□□□ 0.26
RAB42-201ENST00000373826 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
RAB42-201ENST00000373826 OFD1O75665 1012 aa16.64■□□□□ 0.25
RAB42-201ENST00000373826 ADGRB2O60241 1585 aa16.63■□□□□ 0.25
RAB42-201ENST00000373826 TRIM27P14373 513 aa16.63■□□□□ 0.25
RAB42-201ENST00000373826 NUCB1Q02818 461 aa16.63■□□□□ 0.25
RAB42-201ENST00000373826 KIAA1211Q6ZU35 1233 aa16.63■□□□□ 0.25
RAB42-201ENST00000373826 ANP32BQ92688 251 aaKnown RBP16.63■□□□□ 0.25
RAB42-201ENST00000373826 SMC4Q9NTJ3 1288 aa16.63■□□□□ 0.25
RAB42-201ENST00000373826 ZC3H13Q5T200 1668 aaKnown RBP16.63■□□□□ 0.25
RAB42-201ENST00000373826 ARHGAP31Q2M1Z3 1444 aa16.62■□□□□ 0.25
RAB42-201ENST00000373826 GOLGA6L22H0YM25 854 aa16.62■□□□□ 0.25
RAB42-201ENST00000373826 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
RAB42-201ENST00000373826 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.62■□□□□ 0.25
RAB42-201ENST00000373826 NASPP49321 788 aaPredicted RBP16.62■□□□□ 0.25
RAB42-201ENST00000373826 ITPRIPQ8IWB1 547 aa16.62■□□□□ 0.25
RAB42-201ENST00000373826 KIF16BQ96L93 1317 aa16.61■□□□□ 0.25
RAB42-201ENST00000373826 HS1BP3Q53T59 392 aa16.61■□□□□ 0.25
RAB42-201ENST00000373826 BMP2KLQ5H9B9 411 aa16.61■□□□□ 0.25
RAB42-201ENST00000373826 ZBTB40Q9NUA8 1239 aa16.61■□□□□ 0.25
RAB42-201ENST00000373826 MTHFSP49914 203 aa16.6■□□□□ 0.25
RAB42-201ENST00000373826 PPLO60437 1756 aa16.6■□□□□ 0.25
RAB42-201ENST00000373826 NOS1P29475 1434 aa16.6■□□□□ 0.25
RAB42-201ENST00000373826 KLHL40Q2TBA0 621 aa16.6■□□□□ 0.25
RAB42-201ENST00000373826 K7ELQ4 463 aaPredicted RBP16.59■□□□□ 0.25
RAB42-201ENST00000373826 MAP7D2Q96T17 732 aa16.59■□□□□ 0.25
RAB42-201ENST00000373826 KIF2CQ99661 725 aa16.59■□□□□ 0.25
RAB42-201ENST00000373826 ASXL2Q76L83 1435 aa16.59■□□□□ 0.25
RAB42-201ENST00000373826 QRICH2Q9H0J4 1663 aa16.58■□□□□ 0.25
RAB42-201ENST00000373826 TNNT2P45379 298 aaPredicted RBP16.58■□□□□ 0.25
RAB42-201ENST00000373826 CALD1Q05682 793 aaKnown RBP16.58■□□□□ 0.25
RAB42-201ENST00000373826 SSH1Q8WYL5 1049 aa16.58■□□□□ 0.25
RAB42-201ENST00000373826 NSD2O96028 1365 aa16.58■□□□□ 0.25
RAB42-201ENST00000373826 IL16Q14005 1332 aa16.58■□□□□ 0.24
RAB42-201ENST00000373826 MSNP26038 577 aaKnown RBP16.58■□□□□ 0.24
RAB42-201ENST00000373826 EXOSC9Q06265 439 aaKnown RBP16.58■□□□□ 0.24
RAB42-201ENST00000373826 ABCC11Q96J66 1382 aa16.58■□□□□ 0.24
RAB42-201ENST00000373826 ADGRB1O14514 1584 aa16.57■□□□□ 0.24
RAB42-201ENST00000373826 IPO8O15397 1037 aaKnown RBP16.57■□□□□ 0.24
RAB42-201ENST00000373826 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
RAB42-201ENST00000373826 CFAP74Q9C0B2 1584 aa16.57■□□□□ 0.24
RAB42-201ENST00000373826 ZNF445P59923 1031 aa16.57■□□□□ 0.24
RAB42-201ENST00000373826 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
RAB42-201ENST00000373826 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
RAB42-201ENST00000373826 TMEM57Q8N5G2 664 aa16.56■□□□□ 0.24
RAB42-201ENST00000373826 C14orf93Q9H972 538 aaKnown RBP16.56■□□□□ 0.24
RAB42-201ENST00000373826 NOB1Q9ULX3 412 aaKnown RBP16.56■□□□□ 0.24
RAB42-201ENST00000373826 TSR2Q969E8 191 aaKnown RBP16.55■□□□□ 0.24
RAB42-201ENST00000373826 SLC12A5Q9H2X9 1139 aa16.55■□□□□ 0.24
RAB42-201ENST00000373826 DDX49Q9Y6V7 483 aaKnown RBP16.55■□□□□ 0.24
RAB42-201ENST00000373826 NPATQ14207 1427 aa16.54■□□□□ 0.24
RAB42-201ENST00000373826 FRMPD1Q5SYB0 1578 aa16.54■□□□□ 0.24
RAB42-201ENST00000373826 BAG4O95429 457 aaKnown RBP16.54■□□□□ 0.24
RAB42-201ENST00000373826 SSFA2P28290 1259 aa16.54■□□□□ 0.24
RAB42-201ENST00000373826 LNPKQ9C0E8 428 aa16.54■□□□□ 0.24
RAB42-201ENST00000373826 REREQ9P2R6 1566 aa16.54■□□□□ 0.24
RAB42-201ENST00000373826 RIPK4P57078 832 aa16.53■□□□□ 0.24
RAB42-201ENST00000373826 PUS7Q96PZ0 661 aaKnown RBP16.53■□□□□ 0.24
RAB42-201ENST00000373826 ZNF500O60304 480 aaPredicted RBP16.53■□□□□ 0.24
RAB42-201ENST00000373826 GCC1Q96CN9 775 aa16.53■□□□□ 0.24
RAB42-201ENST00000373826 CD2BP2O95400 341 aaKnown RBP16.52■□□□□ 0.24
RAB42-201ENST00000373826 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.24
RAB42-201ENST00000373826 TRAK1Q9UPV9 953 aa16.52■□□□□ 0.24
RAB42-201ENST00000373826 RPGRIP1LQ68CZ1 1315 aa16.52■□□□□ 0.23
RAB42-201ENST00000373826 HECW2Q9P2P5 1572 aa16.51■□□□□ 0.23
RAB42-201ENST00000373826 ALDH1L2Q3SY69 923 aa16.51■□□□□ 0.23
RAB42-201ENST00000373826 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
RAB42-201ENST00000373826 NOL7Q9UMY1 257 aaKnown RBP16.51■□□□□ 0.23
RAB42-201ENST00000373826 MLH3Q9UHC1 1453 aa16.51■□□□□ 0.23
RAB42-201ENST00000373826 TMPOP42166 694 aaKnown RBP16.51■□□□□ 0.23
RAB42-201ENST00000373826 PLEKHF1Q96S99 279 aa16.51■□□□□ 0.23
RAB42-201ENST00000373826 TRIM35Q9UPQ4 493 aa16.51■□□□□ 0.23
RAB42-201ENST00000373826 CD109Q6YHK3 1445 aa16.5■□□□□ 0.23
RAB42-201ENST00000373826 POGZQ7Z3K3 1410 aa16.5■□□□□ 0.23
RAB42-201ENST00000373826 CHGAP10645 457 aaKnown RBP16.5■□□□□ 0.23
RAB42-201ENST00000373826 NUCB2P80303 420 aa16.5■□□□□ 0.23
RAB42-201ENST00000373826 TBC1D9Q6ZT07 1266 aa16.5■□□□□ 0.23
RAB42-201ENST00000373826 PDLIM2Q96JY6 352 aa16.5■□□□□ 0.23
RAB42-201ENST00000373826 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
RAB42-201ENST00000373826 MED14O60244 1454 aa16.5■□□□□ 0.23
RAB42-201ENST00000373826 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
RAB42-201ENST00000373826 CFAP44Q96MT7 982 aa16.49■□□□□ 0.23
RAB42-201ENST00000373826 MCM5P33992 734 aa16.49■□□□□ 0.23
RAB42-201ENST00000373826 MTERF4Q7Z6M4 381 aaKnown RBP16.49■□□□□ 0.23
RAB42-201ENST00000373826 ANKRD36BQ8N2N9 1353 aa16.49■□□□□ 0.23
RAB42-201ENST00000373826 ABCC3O15438 1527 aa16.48■□□□□ 0.23
RAB42-201ENST00000373826 CSPP1Q1MSJ5 1256 aa16.48■□□□□ 0.23
RAB42-201ENST00000373826 CFAP65Q6ZU64 1925 aaKnown RBP16.48■□□□□ 0.23
RAB42-201ENST00000373826 GLI2P10070 1586 aa16.48■□□□□ 0.23
RAB42-201ENST00000373826 RABEP1Q15276 862 aa16.47■□□□□ 0.23
RAB42-201ENST00000373826 ZNF428Q96B54 188 aa16.47■□□□□ 0.23
RAB42-201ENST00000373826 CDC45O75419 566 aa16.47■□□□□ 0.23
RAB42-201ENST00000373826 ZSCAN23Q3MJ62 389 aa16.47■□□□□ 0.23
RAB42-201ENST00000373826 ANKRD45Q5TZF3 282 aa16.47■□□□□ 0.23
RAB42-201ENST00000373826 ARHGEF28Q8N1W1 1705 aaKnown RBP16.47■□□□□ 0.23
RAB42-201ENST00000373826 PIK3C2BO00750 1634 aa16.46■□□□□ 0.23
RAB42-201ENST00000373826 CYP2E1P05181 493 aaPredicted RBP16.46■□□□□ 0.23
RAB42-201ENST00000373826 CAMSAP1Q5T5Y3 1602 aa16.46■□□□□ 0.23
RAB42-201ENST00000373826 TMEM132EQ6IEE7 984 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms