RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 SPATA31A6Q5VVP1 1343 aa28.22■■■□□ 2.11
SYNC-201ENST00000373484 USP6P35125 1406 aa28.21■■■□□ 2.11
SYNC-201ENST00000373484 NRKQ7Z2Y5 1582 aa28.2■■■□□ 2.11
SYNC-201ENST00000373484 TMC1Q8TDI8 760 aa28.2■■■□□ 2.11
SYNC-201ENST00000373484 MED1Q15648 1581 aaPredicted RBP28.2■■■□□ 2.1
SYNC-201ENST00000373484 SLC12A5Q9H2X9 1139 aa28.2■■■□□ 2.1
SYNC-201ENST00000373484 SUPT16HQ9Y5B9 1047 aaKnown RBP28.19■■■□□ 2.1
SYNC-201ENST00000373484 ARHGEF10O15013 1369 aa28.19■■■□□ 2.1
SYNC-201ENST00000373484 BRD4O60885 1362 aaPredicted RBP28.19■■■□□ 2.1
SYNC-201ENST00000373484 ZNF692Q9BU19 519 aaPredicted RBP28.18■■■□□ 2.1
SYNC-201ENST00000373484 ABCA3Q99758 1704 aa28.17■■■□□ 2.1
SYNC-201ENST00000373484 SSH2Q76I76 1423 aa28.17■■■□□ 2.1
SYNC-201ENST00000373484 LRP6O75581 1613 aa28.16■■■□□ 2.1
SYNC-201ENST00000373484 PAK3O75914 559 aaPredicted RBP28.16■■■□□ 2.1
SYNC-201ENST00000373484 CRYBG1Q9Y4K1 1723 aa28.15■■■□□ 2.1
SYNC-201ENST00000373484 KTN1Q86UP2 1357 aaKnown RBP28.15■■■□□ 2.1
SYNC-201ENST00000373484 A0A1W2PP64 1363 aa28.14■■■□□ 2.1
SYNC-201ENST00000373484 LMOD2Q6P5Q4 547 aa28.13■■■□□ 2.09
SYNC-201ENST00000373484 MARF1Q9Y4F3 1742 aaKnown RBP28.13■■■□□ 2.09
SYNC-201ENST00000373484 HDGFL2Q7Z4V5 671 aaPredicted RBP28.13■■■□□ 2.09
SYNC-201ENST00000373484 TERF2IPQ9NYB0 399 aa28.13■■■□□ 2.09
SYNC-201ENST00000373484 PIK3C2AO00443 1686 aa28.12■■■□□ 2.09
SYNC-201ENST00000373484 C11orf95C9JLR9 678 aaPredicted RBP28.12■■■□□ 2.09
SYNC-201ENST00000373484 ANKRD36BQ8N2N9 1353 aa28.11■■■□□ 2.09
SYNC-201ENST00000373484 NUTM2BA6NNL0 878 aaPredicted RBP28.1■■■□□ 2.09
SYNC-201ENST00000373484 NUTM2EB1AL46 878 aaPredicted RBP28.1■■■□□ 2.09
SYNC-201ENST00000373484 NUTM2AQ8IVF1 878 aaPredicted RBP28.1■■■□□ 2.09
SYNC-201ENST00000373484 PHRF1Q9P1Y6 1649 aaKnown RBP28.08■■■□□ 2.09
SYNC-201ENST00000373484 TTC21BQ7Z4L5 1316 aa28.08■■■□□ 2.09
SYNC-201ENST00000373484 EDC4Q6P2E9 1401 aaKnown RBP28.08■■■□□ 2.09
SYNC-201ENST00000373484 ABTB2Q8N961 1025 aa28.07■■■□□ 2.08
SYNC-201ENST00000373484 POLR3GLQ9BT43 218 aa28.07■■■□□ 2.08
SYNC-201ENST00000373484 TTC21AQ8NDW8 1320 aa28.06■■■□□ 2.08
SYNC-201ENST00000373484 KIF7Q2M1P5 1343 aa28.05■■■□□ 2.08
SYNC-201ENST00000373484 CABLES1Q8TDN4 633 aa28.04■■■□□ 2.08
SYNC-201ENST00000373484 USP54Q70EL1 1684 aa28.04■■■□□ 2.08
SYNC-201ENST00000373484 NUTM2GQ5VZR2 741 aa28.03■■■□□ 2.08
SYNC-201ENST00000373484 MEX3CQ5U5Q3 659 aaKnown RBP28.01■■■□□ 2.07
SYNC-201ENST00000373484 PLEKHG5O94827 1062 aa28■■■□□ 2.07
SYNC-201ENST00000373484 ADAMTS2O95450 1211 aa27.99■■■□□ 2.07
SYNC-201ENST00000373484 NLRP13Q86W25 1043 aa27.99■■■□□ 2.07
SYNC-201ENST00000373484 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.99■■■□□ 2.07
SYNC-201ENST00000373484 USP19O94966 1318 aa27.99■■■□□ 2.07
SYNC-201ENST00000373484 KIF20BQ96Q89 1820 aa27.98■■■□□ 2.07
SYNC-201ENST00000373484 HAP1P54257 671 aaPredicted RBP27.98■■■□□ 2.07
SYNC-201ENST00000373484 CCDC7Q96M83 1385 aa27.98■■■□□ 2.07
SYNC-201ENST00000373484 SLIT3O75094 1523 aa27.98■■■□□ 2.07
SYNC-201ENST00000373484 NLRP6P59044 892 aa27.97■■■□□ 2.07
SYNC-201ENST00000373484 WASHC2AQ641Q2 1341 aa27.96■■■□□ 2.07
SYNC-201ENST00000373484 USP31Q70CQ4 1352 aa27.95■■■□□ 2.07
SYNC-201ENST00000373484 NME9Q86XW9 330 aa27.95■■■□□ 2.06
SYNC-201ENST00000373484 CARD14Q9BXL6 1004 aa27.95■■■□□ 2.06
SYNC-201ENST00000373484 C8orf37Q96NL8 207 aa27.94■■■□□ 2.06
SYNC-201ENST00000373484 NSD3Q9BZ95 1437 aa27.93■■■□□ 2.06
SYNC-201ENST00000373484 PLCH1Q4KWH8 1693 aa27.92■■■□□ 2.06
SYNC-201ENST00000373484 PHF23Q9BUL5 403 aaPredicted RBP27.92■■■□□ 2.06
SYNC-201ENST00000373484 OVOS2A0A0J9YW53 1432 aa27.91■■■□□ 2.06
SYNC-201ENST00000373484 OVOS2Q6IE36 1432 aa27.91■■■□□ 2.06
SYNC-201ENST00000373484 ZRANB1Q9UGI0 708 aa27.91■■■□□ 2.06
SYNC-201ENST00000373484 COL14A1Q05707 1796 aaKnown RBP27.91■■■□□ 2.06
SYNC-201ENST00000373484 PANK3Q9H999 370 aa27.9■■■□□ 2.06
SYNC-201ENST00000373484 GCP02774 474 aa27.9■■■□□ 2.06
SYNC-201ENST00000373484 NWD2Q9ULI1 1742 aa27.89■■■□□ 2.06
SYNC-201ENST00000373484 CCER2I3L3R5 266 aa27.89■■■□□ 2.06
SYNC-201ENST00000373484 NGLY1Q96IV0 654 aa27.89■■■□□ 2.06
SYNC-201ENST00000373484 RGS17Q9UGC6 210 aaPredicted RBP27.88■■■□□ 2.05
SYNC-201ENST00000373484 AFF2P51816 1311 aa27.88■■■□□ 2.05
SYNC-201ENST00000373484 NFAT5O94916 1531 aa27.87■■■□□ 2.05
SYNC-201ENST00000373484 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.87■■■□□ 2.05
SYNC-201ENST00000373484 SLIT2O94813 1529 aa27.87■■■□□ 2.05
SYNC-201ENST00000373484 KIAA0232Q92628 1395 aa27.86■■■□□ 2.05
SYNC-201ENST00000373484 FYB1O15117 783 aa27.86■■■□□ 2.05
SYNC-201ENST00000373484 FNBP4Q8N3X1 1017 aaPredicted RBP27.86■■■□□ 2.05
SYNC-201ENST00000373484 CPDO75976 1380 aa27.86■■■□□ 2.05
SYNC-201ENST00000373484 ANKRD26Q9UPS8 1709 aa27.85■■■□□ 2.05
SYNC-201ENST00000373484 KCNH5Q8NCM2 988 aa27.85■■■□□ 2.05
SYNC-201ENST00000373484 FAM83GA6ND36 823 aa27.84■■■□□ 2.05
SYNC-201ENST00000373484 ZC3H6P61129 1189 aaKnown RBP27.84■■■□□ 2.05
SYNC-201ENST00000373484 LTN1O94822 1766 aa27.84■■■□□ 2.05
SYNC-201ENST00000373484 NRAPQ86VF7 1730 aa27.83■■■□□ 2.05
SYNC-201ENST00000373484 PRDM11Q9NQV5 511 aa27.83■■■□□ 2.05
SYNC-201ENST00000373484 LMO7Q8WWI1 1683 aa27.82■■■□□ 2.04
SYNC-201ENST00000373484 BCL9LQ86UU0 1499 aa27.82■■■□□ 2.04
SYNC-201ENST00000373484 ZNF772Q68DY9 489 aaPredicted RBP27.82■■■□□ 2.04
SYNC-201ENST00000373484 COG3Q96JB2 828 aa27.82■■■□□ 2.04
SYNC-201ENST00000373484 CGNL1Q0VF96 1302 aa27.82■■■□□ 2.04
SYNC-201ENST00000373484 GGNBP2Q9H3C7 697 aa27.81■■■□□ 2.04
SYNC-201ENST00000373484 TSHZ2Q9NRE2 1034 aa27.81■■■□□ 2.04
SYNC-201ENST00000373484 COL18A1P39060 1754 aa27.81■■■□□ 2.04
SYNC-201ENST00000373484 USP21Q9UK80 565 aa27.8■■■□□ 2.04
SYNC-201ENST00000373484 SOX12O15370 315 aa27.78■■■□□ 2.04
SYNC-201ENST00000373484 CHRNA2Q15822 529 aa27.78■■■□□ 2.04
SYNC-201ENST00000373484 RGPD5Q99666 1765 aa27.77■■■□□ 2.04
SYNC-201ENST00000373484 ARHGEF25Q86VW2 580 aa27.76■■■□□ 2.04
SYNC-201ENST00000373484 POTEAQ6S8J7 498 aa27.75■■■□□ 2.03
SYNC-201ENST00000373484 UNC5CLQ8IV45 518 aa27.75■■■□□ 2.03
SYNC-201ENST00000373484 BTG4Q9NY30 223 aa27.75■■■□□ 2.03
SYNC-201ENST00000373484 KNSTRNQ9Y448 316 aa27.75■■■□□ 2.03
SYNC-201ENST00000373484 ABCC6O95255 1503 aa27.74■■■□□ 2.03
SYNC-201ENST00000373484 CAMTA1Q9Y6Y1 1673 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms