RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 NPATQ14207 1427 aa10.44□□□□□ -0.74
GARNL3-201ENST00000373386 NINLQ9Y2I6 1382 aa10.44□□□□□ -0.74
GARNL3-201ENST00000373386 ANAPC15P60006 121 aa10.44□□□□□ -0.74
GARNL3-201ENST00000373386 MAPK8IP2Q13387 824 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-201ENST00000373386 PPP4R3BQ5MIZ7 849 aa10.44□□□□□ -0.74
GARNL3-201ENST00000373386 CC2D2BQ6DHV5 1058 aa10.44□□□□□ -0.74
GARNL3-201ENST00000373386 CD109Q6YHK3 1445 aa10.43□□□□□ -0.74
GARNL3-201ENST00000373386 TPM2P07951 284 aa10.43□□□□□ -0.74
GARNL3-201ENST00000373386 TNNT2P45379 298 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-201ENST00000373386 WDR43Q15061 677 aaKnown RBP eCLIP10.43□□□□□ -0.74
GARNL3-201ENST00000373386 ADAMTS8Q9UP79 889 aa10.43□□□□□ -0.74
GARNL3-201ENST00000373386 SHPRHQ149N8 1683 aa10.43□□□□□ -0.74
GARNL3-201ENST00000373386 GPATCH11Q8N954 259 aa10.43□□□□□ -0.74
GARNL3-201ENST00000373386 ZHX1Q9UKY1 873 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-201ENST00000373386 RICTORQ6R327 1708 aa10.42□□□□□ -0.74
GARNL3-201ENST00000373386 ARHGEF28Q8N1W1 1705 aaKnown RBP10.42□□□□□ -0.74
GARNL3-201ENST00000373386 GLI2P10070 1586 aa10.42□□□□□ -0.74
GARNL3-201ENST00000373386 DIP2CQ9Y2E4 1556 aa10.42□□□□□ -0.74
GARNL3-201ENST00000373386 PSEN1P49768 467 aa10.42□□□□□ -0.74
GARNL3-201ENST00000373386 DUSP27Q5VZP5 1158 aa10.42□□□□□ -0.74
GARNL3-201ENST00000373386 NSD2O96028 1365 aa10.42□□□□□ -0.74
GARNL3-201ENST00000373386 PLEKHH1Q9ULM0 1364 aa10.42□□□□□ -0.74
GARNL3-201ENST00000373386 SOX12O15370 315 aa10.42□□□□□ -0.74
GARNL3-201ENST00000373386 C14orf93Q9H972 538 aaKnown RBP10.42□□□□□ -0.74
GARNL3-201ENST00000373386 CWC22Q9HCG8 908 aaKnown RBP10.42□□□□□ -0.74
GARNL3-201ENST00000373386 NKTRP30414 1462 aaKnown RBP10.41□□□□□ -0.74
GARNL3-201ENST00000373386 NEXMIFQ5QGS0 1516 aa10.41□□□□□ -0.74
GARNL3-201ENST00000373386 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.41□□□□□ -0.74
GARNL3-201ENST00000373386 CDCA7LQ96GN5 454 aa10.41□□□□□ -0.74
GARNL3-201ENST00000373386 MAP7D2Q96T17 732 aa10.41□□□□□ -0.74
GARNL3-201ENST00000373386 SIGLEC1Q9BZZ2 1709 aa10.41□□□□□ -0.74
GARNL3-201ENST00000373386 GOLGA2Q08379 1002 aa10.41□□□□□ -0.74
GARNL3-201ENST00000373386 ADGRF5Q8IZF2 1346 aa10.41□□□□□ -0.74
GARNL3-201ENST00000373386 TAF3Q5VWG9 929 aa10.4□□□□□ -0.74
GARNL3-201ENST00000373386 RRAGDQ9NQL2 400 aaPredicted RBP10.4□□□□□ -0.74
GARNL3-201ENST00000373386 SLFN5Q08AF3 891 aa10.4□□□□□ -0.74
GARNL3-201ENST00000373386 DNAJC5Q9H3Z4 198 aa10.4□□□□□ -0.74
GARNL3-201ENST00000373386 CLTCQ00610 1675 aaKnown RBP10.4□□□□□ -0.74
GARNL3-201ENST00000373386 KDM2BQ8NHM5 1336 aa10.4□□□□□ -0.75
GARNL3-201ENST00000373386 DNTTIP2Q5QJE6 756 aaKnown RBP10.4□□□□□ -0.75
GARNL3-201ENST00000373386 CRBNQ96SW2 442 aa10.4□□□□□ -0.75
GARNL3-201ENST00000373386 REREQ9P2R6 1566 aa10.39□□□□□ -0.75
GARNL3-201ENST00000373386 IQSEC2Q5JU85 1478 aa10.39□□□□□ -0.75
GARNL3-201ENST00000373386 CFAP70Q5T0N1 1121 aa10.39□□□□□ -0.75
GARNL3-201ENST00000373386 TRIM44Q96DX7 344 aaPredicted RBP10.39□□□□□ -0.75
GARNL3-201ENST00000373386 LAS1LQ9Y4W2 734 aaKnown RBP10.38□□□□□ -0.75
GARNL3-201ENST00000373386 ANKRD26Q9UPS8 1709 aa10.38□□□□□ -0.75
GARNL3-201ENST00000373386 E9PSI1 815 aa10.38□□□□□ -0.75
GARNL3-201ENST00000373386 CENPQQ7L2Z9 268 aaPredicted RBP10.38□□□□□ -0.75
GARNL3-201ENST00000373386 PLIN1O60240 522 aa10.37□□□□□ -0.75
GARNL3-201ENST00000373386 CLCN1P35523 988 aa10.37□□□□□ -0.75
GARNL3-201ENST00000373386 ZNF692Q9BU19 519 aaPredicted RBP10.37□□□□□ -0.75
GARNL3-201ENST00000373386 MED14O60244 1454 aa10.37□□□□□ -0.75
GARNL3-201ENST00000373386 DMTNQ08495 405 aa10.37□□□□□ -0.75
GARNL3-201ENST00000373386 MAFGO15525 162 aa10.36□□□□□ -0.75
GARNL3-201ENST00000373386 VIRMAQ69YN4 1812 aaKnown RBP10.36□□□□□ -0.75
GARNL3-201ENST00000373386 ADGRB2O60241 1585 aa10.36□□□□□ -0.75
GARNL3-201ENST00000373386 CEP120Q8N960 986 aa10.36□□□□□ -0.75
GARNL3-201ENST00000373386 CARD14Q9BXL6 1004 aa10.36□□□□□ -0.75
GARNL3-201ENST00000373386 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
GARNL3-201ENST00000373386 DIP2BQ9P265 1576 aa10.36□□□□□ -0.75
GARNL3-201ENST00000373386 PREX1Q8TCU6 1659 aa10.36□□□□□ -0.75
GARNL3-201ENST00000373386 KIF20AO95235 890 aa10.36□□□□□ -0.75
GARNL3-201ENST00000373386 CCDC27Q2M243 656 aa10.35□□□□□ -0.75
GARNL3-201ENST00000373386 PHF23Q9BUL5 403 aaPredicted RBP10.35□□□□□ -0.75
GARNL3-201ENST00000373386 TMEM131LA2VDJ0 1609 aa10.35□□□□□ -0.75
GARNL3-201ENST00000373386 TULP4Q9NRJ4 1543 aa10.35□□□□□ -0.75
GARNL3-201ENST00000373386 ANKRD36BQ8N2N9 1353 aa10.35□□□□□ -0.75
GARNL3-201ENST00000373386 KIF13AQ9H1H9 1805 aa10.34□□□□□ -0.75
GARNL3-201ENST00000373386 NSD3Q9BZ95 1437 aa10.34□□□□□ -0.75
GARNL3-201ENST00000373386 NBPF20Q3BBV1 942 aa10.33□□□□□ -0.76
GARNL3-201ENST00000373386 FRAT1Q92837 279 aaPredicted RBP10.33□□□□□ -0.76
GARNL3-201ENST00000373386 PDE3AQ14432 1141 aa10.33□□□□□ -0.76
GARNL3-201ENST00000373386 CGNL1Q0VF96 1302 aa10.33□□□□□ -0.76
GARNL3-201ENST00000373386 FAM69CQ0P6D2 419 aa10.32□□□□□ -0.76
GARNL3-201ENST00000373386 CARD10Q9BWT7 1032 aa10.32□□□□□ -0.76
GARNL3-201ENST00000373386 AGLP35573 1532 aa10.32□□□□□ -0.76
GARNL3-201ENST00000373386 FAM161AQ3B820 660 aa10.32□□□□□ -0.76
GARNL3-201ENST00000373386 C20orf194Q5TEA3 1177 aa10.31□□□□□ -0.76
GARNL3-201ENST00000373386 EGFL6Q8IUX8 553 aa10.31□□□□□ -0.76
GARNL3-201ENST00000373386 WDR63Q8IWG1 891 aa10.31□□□□□ -0.76
GARNL3-201ENST00000373386 EVC2Q86UK5 1308 aa10.31□□□□□ -0.76
GARNL3-201ENST00000373386 TSPOAP1O95153 1857 aa10.31□□□□□ -0.76
GARNL3-201ENST00000373386 DLC1Q96QB1 1528 aa10.31□□□□□ -0.76
GARNL3-201ENST00000373386 SLC20A2Q08357 652 aa10.3□□□□□ -0.76
GARNL3-201ENST00000373386 CDC42BPGQ6DT37 1551 aa10.3□□□□□ -0.76
GARNL3-201ENST00000373386 ABCC11Q96J66 1382 aa10.3□□□□□ -0.76
GARNL3-201ENST00000373386 RUNDC1Q96C34 613 aa10.3□□□□□ -0.76
GARNL3-201ENST00000373386 CT47B1P0C2W7 299 aaPredicted RBP10.29□□□□□ -0.76
GARNL3-201ENST00000373386 PTPRMP28827 1452 aa10.29□□□□□ -0.76
GARNL3-201ENST00000373386 APAF1O14727 1248 aa10.29□□□□□ -0.76
GARNL3-201ENST00000373386 SKAP1Q86WV1 359 aa10.29□□□□□ -0.76
GARNL3-201ENST00000373386 YY1AP1Q9H869 796 aa10.29□□□□□ -0.76
GARNL3-201ENST00000373386 ATAD2Q6PL18 1390 aa10.28□□□□□ -0.76
GARNL3-201ENST00000373386 NFKBIBQ15653 356 aa10.28□□□□□ -0.76
GARNL3-201ENST00000373386 C8orf34Q49A92 452 aa10.28□□□□□ -0.76
GARNL3-201ENST00000373386 LETM1O95202 739 aaPredicted RBP10.28□□□□□ -0.76
GARNL3-201ENST00000373386 MYO5BQ9ULV0 1848 aa10.28□□□□□ -0.76
GARNL3-201ENST00000373386 COL3A1P02461 1466 aaPredicted RBP10.27□□□□□ -0.76
GARNL3-201ENST00000373386 MTERF4Q7Z6M4 381 aaKnown RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms