RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 CT47B1P0C2W7 299 aaPredicted RBP24.45■■□□□ 1.5
TMEM53-202ENST00000372237 FTSJ3Q8IY81 847 aaKnown RBP24.45■■□□□ 1.5
TMEM53-202ENST00000372237 PDZRN3Q9UPQ7 1066 aa24.45■■□□□ 1.5
TMEM53-202ENST00000372237 TSR2Q969E8 191 aaKnown RBP24.44■■□□□ 1.5
TMEM53-202ENST00000372237 ATAD2Q6PL18 1390 aa24.44■■□□□ 1.5
TMEM53-202ENST00000372237 PLEKHF1Q96S99 279 aa24.44■■□□□ 1.5
TMEM53-202ENST00000372237 TERF2IPQ9NYB0 399 aa24.44■■□□□ 1.5
TMEM53-202ENST00000372237 MINK1Q8N4C8 1332 aaPredicted RBP24.43■■□□□ 1.5
TMEM53-202ENST00000372237 TMPOP42166 694 aaKnown RBP24.43■■□□□ 1.5
TMEM53-202ENST00000372237 DZIP1LQ8IYY4 767 aaKnown RBP24.43■■□□□ 1.5
TMEM53-202ENST00000372237 ZMYM3Q14202 1370 aa24.42■■□□□ 1.5
TMEM53-202ENST00000372237 CLTCQ00610 1675 aaKnown RBP24.42■■□□□ 1.5
TMEM53-202ENST00000372237 PTPRMP28827 1452 aa24.42■■□□□ 1.5
TMEM53-202ENST00000372237 POGKQ9P215 609 aa24.41■■□□□ 1.5
TMEM53-202ENST00000372237 PRAM1Q96QH2 718 aa24.41■■□□□ 1.5
TMEM53-202ENST00000372237 FYB1O15117 783 aa24.4■■□□□ 1.5
TMEM53-202ENST00000372237 EXOSC9Q06265 439 aaKnown RBP24.4■■□□□ 1.5
TMEM53-202ENST00000372237 SMC4Q9NTJ3 1288 aa24.4■■□□□ 1.5
TMEM53-202ENST00000372237 COL3A1P02461 1466 aaPredicted RBP24.4■■□□□ 1.5
TMEM53-202ENST00000372237 FRAT2O75474 233 aaPredicted RBP24.4■■□□□ 1.5
TMEM53-202ENST00000372237 BECN1Q14457 450 aa24.4■■□□□ 1.5
TMEM53-202ENST00000372237 UPF2Q9HAU5 1272 aaKnown RBP24.4■■□□□ 1.5
TMEM53-202ENST00000372237 STAG3Q9UJ98 1225 aa24.4■■□□□ 1.5
TMEM53-202ENST00000372237 NLRP1Q9C000 1473 aa24.39■■□□□ 1.5
TMEM53-202ENST00000372237 ANKRD26Q9UPS8 1709 aa24.39■■□□□ 1.5
TMEM53-202ENST00000372237 TRIM35Q9UPQ4 493 aa24.39■■□□□ 1.5
TMEM53-202ENST00000372237 YTHDC2Q9H6S0 1430 aaKnown RBP24.38■■□□□ 1.49
TMEM53-202ENST00000372237 SPATA31D1Q6ZQQ2 1576 aa24.38■■□□□ 1.49
TMEM53-202ENST00000372237 MED14O60244 1454 aa24.37■■□□□ 1.49
TMEM53-202ENST00000372237 CD163L1Q9NR16 1453 aa24.37■■□□□ 1.49
TMEM53-202ENST00000372237 IL27Q8NEV9 243 aa24.36■■□□□ 1.49
TMEM53-202ENST00000372237 HDGFL2Q7Z4V5 671 aaPredicted RBP24.35■■□□□ 1.49
TMEM53-202ENST00000372237 ESF1Q9H501 851 aaKnown RBP24.35■■□□□ 1.49
TMEM53-202ENST00000372237 TRIM27P14373 513 aa24.35■■□□□ 1.49
TMEM53-202ENST00000372237 SSH1Q8WYL5 1049 aa24.34■■□□□ 1.49
TMEM53-202ENST00000372237 DIAPH1O60610 1272 aaKnown RBP24.34■■□□□ 1.49
TMEM53-202ENST00000372237 RIPK4P57078 832 aa24.34■■□□□ 1.49
TMEM53-202ENST00000372237 IL16Q14005 1332 aa24.34■■□□□ 1.49
TMEM53-202ENST00000372237 DDX19BQ9UMR2 479 aa24.33■■□□□ 1.48
TMEM53-202ENST00000372237 A2ML1A8K2U0 1454 aa24.32■■□□□ 1.48
TMEM53-202ENST00000372237 ATF7IPQ6VMQ6 1270 aa24.32■■□□□ 1.48
TMEM53-202ENST00000372237 ITPRIPQ8IWB1 547 aa24.32■■□□□ 1.48
TMEM53-202ENST00000372237 TBC1D32Q96NH3 1257 aa24.32■■□□□ 1.48
TMEM53-202ENST00000372237 PNNQ9H307 717 aaKnown RBP24.32■■□□□ 1.48
TMEM53-202ENST00000372237 CDK19Q9BWU1 502 aa24.31■■□□□ 1.48
TMEM53-202ENST00000372237 CABP1Q9NZU7 370 aa24.29■■□□□ 1.48
TMEM53-202ENST00000372237 NOB1Q9ULX3 412 aaKnown RBP24.29■■□□□ 1.48
TMEM53-202ENST00000372237 ALKQ9UM73 1620 aa24.29■■□□□ 1.48
TMEM53-202ENST00000372237 PNPLA6Q8IY17 1366 aa24.29■■□□□ 1.48
TMEM53-202ENST00000372237 SLKQ9H2G2 1235 aaPredicted RBP24.28■■□□□ 1.48
TMEM53-202ENST00000372237 KIF20BQ96Q89 1820 aa24.28■■□□□ 1.48
TMEM53-202ENST00000372237 HDAC1Q13547 482 aaPredicted RBP24.28■■□□□ 1.48
TMEM53-202ENST00000372237 KIF16BQ96L93 1317 aa24.26■■□□□ 1.47
TMEM53-202ENST00000372237 RIMS2Q9UQ26 1411 aa24.25■■□□□ 1.47
TMEM53-202ENST00000372237 FCHSD2O94868 740 aa24.24■■□□□ 1.47
TMEM53-202ENST00000372237 IPO8O15397 1037 aaKnown RBP24.24■■□□□ 1.47
TMEM53-202ENST00000372237 TMEM57Q8N5G2 664 aa24.24■■□□□ 1.47
TMEM53-202ENST00000372237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.23■■□□□ 1.47
TMEM53-202ENST00000372237 TBC1D2Q9BYX2 928 aa24.22■■□□□ 1.47
TMEM53-202ENST00000372237 RTN4Q9NQC3 1192 aaKnown RBP24.22■■□□□ 1.47
TMEM53-202ENST00000372237 LRRC7Q96NW7 1537 aa24.22■■□□□ 1.47
TMEM53-202ENST00000372237 BRPF3Q9ULD4 1205 aa24.21■■□□□ 1.47
TMEM53-202ENST00000372237 PRKAR2BP31323 418 aa24.21■■□□□ 1.47
TMEM53-202ENST00000372237 ALDH1L2Q3SY69 923 aa24.21■■□□□ 1.47
TMEM53-202ENST00000372237 ZBTB40Q9NUA8 1239 aa24.21■■□□□ 1.47
TMEM53-202ENST00000372237 SMC5Q8IY18 1101 aa24.2■■□□□ 1.46
TMEM53-202ENST00000372237 CDC42BPGQ6DT37 1551 aa24.2■■□□□ 1.46
TMEM53-202ENST00000372237 ANTXR1Q9H6X2 564 aa24.19■■□□□ 1.46
TMEM53-202ENST00000372237 TNRQ92752 1358 aa24.19■■□□□ 1.46
TMEM53-202ENST00000372237 RSPH6AQ9H0K4 717 aa24.19■■□□□ 1.46
TMEM53-202ENST00000372237 POLKQ9UBT6 870 aa24.19■■□□□ 1.46
TMEM53-202ENST00000372237 FBLN1P23142 703 aa24.18■■□□□ 1.46
TMEM53-202ENST00000372237 FAM135BQ49AJ0 1406 aa24.18■■□□□ 1.46
TMEM53-202ENST00000372237 MFAP1P55081 439 aaKnown RBP24.18■■□□□ 1.46
TMEM53-202ENST00000372237 WAPLQ7Z5K2 1190 aa24.18■■□□□ 1.46
TMEM53-202ENST00000372237 C22orf23Q9BZE7 217 aa24.17■■□□□ 1.46
TMEM53-202ENST00000372237 ATP7BP35670 1465 aa24.17■■□□□ 1.46
TMEM53-202ENST00000372237 TRHP20396 242 aaPredicted RBP24.17■■□□□ 1.46
TMEM53-202ENST00000372237 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.17■■□□□ 1.46
TMEM53-202ENST00000372237 DLC1Q96QB1 1528 aa24.15■■□□□ 1.46
TMEM53-202ENST00000372237 MAP2P11137 1827 aaKnown RBP24.15■■□□□ 1.46
TMEM53-202ENST00000372237 ZNF428Q96B54 188 aa24.15■■□□□ 1.46
TMEM53-202ENST00000372237 HMOX1P09601 288 aa24.13■■□□□ 1.45
TMEM53-202ENST00000372237 NFE2L2Q16236 605 aa24.12■■□□□ 1.45
TMEM53-202ENST00000372237 PHACTR3Q96KR7 559 aa24.12■■□□□ 1.45
TMEM53-202ENST00000372237 PPIP5K1Q6PFW1 1433 aa24.12■■□□□ 1.45
TMEM53-202ENST00000372237 HDGFP51858 240 aaKnown RBP24.11■■□□□ 1.45
TMEM53-202ENST00000372237 BRPF1P55201 1214 aaPredicted RBP24.11■■□□□ 1.45
TMEM53-202ENST00000372237 CALD1Q05682 793 aaKnown RBP24.11■■□□□ 1.45
TMEM53-202ENST00000372237 CEBPAP49715 358 aaPredicted RBP24.1■■□□□ 1.45
TMEM53-202ENST00000372237 NUCB1Q02818 461 aa24.1■■□□□ 1.45
TMEM53-202ENST00000372237 SPRYD3Q8NCJ5 442 aa24.1■■□□□ 1.45
TMEM53-202ENST00000372237 EMILIN1Q9Y6C2 1016 aa24.1■■□□□ 1.45
TMEM53-202ENST00000372237 THUMPD2Q9BTF0 503 aaKnown RBP24.09■■□□□ 1.45
TMEM53-202ENST00000372237 LNPKQ9C0E8 428 aa24.09■■□□□ 1.45
TMEM53-202ENST00000372237 TMEM2Q9UHN6 1383 aa24.08■■□□□ 1.45
TMEM53-202ENST00000372237 SETD1AO15047 1707 aaKnown RBP24.08■■□□□ 1.44
TMEM53-202ENST00000372237 VAMP4O75379 141 aa24.07■■□□□ 1.44
TMEM53-202ENST00000372237 METP08581 1390 aa24.07■■□□□ 1.44
TMEM53-202ENST00000372237 EDC4Q6P2E9 1401 aaKnown RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms