RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 ZMYM3Q14202 1370 aa21.82■■□□□ 1.08
VEGFA-205ENST00000372067 TMPOP42166 694 aaKnown RBP21.81■■□□□ 1.08
VEGFA-205ENST00000372067 NUDT16Q96DE0 195 aaKnown RBP21.81■■□□□ 1.08
VEGFA-205ENST00000372067 NEURL4Q96JN8 1562 aa21.81■■□□□ 1.08
VEGFA-205ENST00000372067 MS4A1P11836 297 aa21.81■■□□□ 1.08
VEGFA-205ENST00000372067 TNNQ9UQP3 1299 aa21.81■■□□□ 1.08
VEGFA-205ENST00000372067 EID1Q9Y6B2 187 aa21.81■■□□□ 1.08
VEGFA-205ENST00000372067 GLIPR1L2Q4G1C9 344 aa21.8■■□□□ 1.08
VEGFA-205ENST00000372067 NSD2O96028 1365 aa21.8■■□□□ 1.08
VEGFA-205ENST00000372067 RRS1Q15050 365 aaKnown RBP21.8■■□□□ 1.08
VEGFA-205ENST00000372067 C14orf37Q86TY3 774 aa21.8■■□□□ 1.08
VEGFA-205ENST00000372067 BACH2Q9BYV9 841 aa21.8■■□□□ 1.08
VEGFA-205ENST00000372067 SIGLEC1Q9BZZ2 1709 aa21.8■■□□□ 1.08
VEGFA-205ENST00000372067 WASLO00401 505 aaPredicted RBP21.8■■□□□ 1.08
VEGFA-205ENST00000372067 RARSP54136 660 aaKnown RBP21.8■■□□□ 1.08
VEGFA-205ENST00000372067 EMILIN1Q9Y6C2 1016 aa21.8■■□□□ 1.08
VEGFA-205ENST00000372067 ITPRIPQ8IWB1 547 aa21.79■■□□□ 1.08
VEGFA-205ENST00000372067 PIK3C2BO00750 1634 aa21.78■■□□□ 1.08
VEGFA-205ENST00000372067 TULP4Q9NRJ4 1543 aa21.78■■□□□ 1.08
VEGFA-205ENST00000372067 RICTORQ6R327 1708 aa21.78■■□□□ 1.08
VEGFA-205ENST00000372067 A0A0U1RQG5 324 aaPredicted RBP21.77■■□□□ 1.08
VEGFA-205ENST00000372067 USP35Q9P2H5 1018 aa21.77■■□□□ 1.08
VEGFA-205ENST00000372067 TRMT2AQ8IZ69 625 aaKnown RBP21.77■■□□□ 1.08
VEGFA-205ENST00000372067 THUMPD2Q9BTF0 503 aaKnown RBP21.76■■□□□ 1.07
VEGFA-205ENST00000372067 PDE3AQ14432 1141 aa21.76■■□□□ 1.07
VEGFA-205ENST00000372067 ZKSCAN2Q63HK3 967 aa21.76■■□□□ 1.07
VEGFA-205ENST00000372067 IFT172Q9UG01 1749 aa21.75■■□□□ 1.07
VEGFA-205ENST00000372067 NINLQ9Y2I6 1382 aa21.75■■□□□ 1.07
VEGFA-205ENST00000372067 CCDC61Q9Y6R9 512 aa21.75■■□□□ 1.07
VEGFA-205ENST00000372067 TNRQ92752 1358 aa21.75■■□□□ 1.07
VEGFA-205ENST00000372067 ABCC11Q96J66 1382 aa21.74■■□□□ 1.07
VEGFA-205ENST00000372067 GSE1Q14687 1217 aa21.74■■□□□ 1.07
VEGFA-205ENST00000372067 PMFBP1Q8TBY8 1022 aa21.73■■□□□ 1.07
VEGFA-205ENST00000372067 SLC4A3P48751 1232 aa21.73■■□□□ 1.07
VEGFA-205ENST00000372067 ZBTB7CA1YPR0 619 aa21.73■■□□□ 1.07
VEGFA-205ENST00000372067 IGHDP01880 384 aa21.73■■□□□ 1.07
VEGFA-205ENST00000372067 ZFYVE9O95405 1425 aa21.73■■□□□ 1.07
VEGFA-205ENST00000372067 DZIP1LQ8IYY4 767 aaKnown RBP21.72■■□□□ 1.07
VEGFA-205ENST00000372067 NGDNQ8NEJ9 315 aaKnown RBP21.72■■□□□ 1.07
VEGFA-205ENST00000372067 METP08581 1390 aa21.71■■□□□ 1.07
VEGFA-205ENST00000372067 FAM161AQ3B820 660 aa21.71■■□□□ 1.07
VEGFA-205ENST00000372067 DIP2BQ9P265 1576 aa21.71■■□□□ 1.07
VEGFA-205ENST00000372067 POLKQ9UBT6 870 aa21.71■■□□□ 1.07
VEGFA-205ENST00000372067 RLBP1P12271 317 aa21.7■■□□□ 1.06
VEGFA-205ENST00000372067 PREX1Q8TCU6 1659 aa21.7■■□□□ 1.06
VEGFA-205ENST00000372067 PPIP5K1Q6PFW1 1433 aa21.69■■□□□ 1.06
VEGFA-205ENST00000372067 FAM43AQ8N2R8 423 aa21.68■■□□□ 1.06
VEGFA-205ENST00000372067 RWDD1Q9H446 243 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-205ENST00000372067 A2ML1A8K2U0 1454 aa21.68■■□□□ 1.06
VEGFA-205ENST00000372067 DDRGK1Q96HY6 314 aa21.68■■□□□ 1.06
VEGFA-205ENST00000372067 ALKQ9UM73 1620 aa21.68■■□□□ 1.06
VEGFA-205ENST00000372067 MYO5BQ9ULV0 1848 aa21.68■■□□□ 1.06
VEGFA-205ENST00000372067 CLTCQ00610 1675 aaKnown RBP21.67■■□□□ 1.06
VEGFA-205ENST00000372067 SSH1Q8WYL5 1049 aa21.67■■□□□ 1.06
VEGFA-205ENST00000372067 FCHSD2O94868 740 aa21.67■■□□□ 1.06
VEGFA-205ENST00000372067 PTPRMP28827 1452 aa21.66■■□□□ 1.06
VEGFA-205ENST00000372067 RBM10P98175 930 aaKnown RBP21.66■■□□□ 1.06
VEGFA-205ENST00000372067 MYO3AQ8NEV4 1616 aa21.66■■□□□ 1.06
VEGFA-205ENST00000372067 NUTM2GQ5VZR2 741 aa21.66■■□□□ 1.06
VEGFA-205ENST00000372067 NOB1Q9ULX3 412 aaKnown RBP21.66■■□□□ 1.06
VEGFA-205ENST00000372067 CCDC27Q2M243 656 aa21.66■■□□□ 1.06
VEGFA-205ENST00000372067 KDM2BQ8NHM5 1336 aa21.65■■□□□ 1.06
VEGFA-205ENST00000372067 IPO8O15397 1037 aaKnown RBP21.65■■□□□ 1.06
VEGFA-205ENST00000372067 ZC3H13Q5T200 1668 aaKnown RBP21.65■■□□□ 1.06
VEGFA-205ENST00000372067 TMEM131LA2VDJ0 1609 aa21.65■■□□□ 1.06
VEGFA-205ENST00000372067 PHACTR3Q96KR7 559 aa21.64■■□□□ 1.05
VEGFA-205ENST00000372067 TRIM35Q9UPQ4 493 aa21.64■■□□□ 1.05
VEGFA-205ENST00000372067 ARHGEF28Q8N1W1 1705 aaKnown RBP21.64■■□□□ 1.05
VEGFA-205ENST00000372067 LTKP29376 864 aa21.63■■□□□ 1.05
VEGFA-205ENST00000372067 AAMPQ13685 434 aa21.63■■□□□ 1.05
VEGFA-205ENST00000372067 DCTN1Q14203 1278 aa21.63■■□□□ 1.05
VEGFA-205ENST00000372067 UPF2Q9HAU5 1272 aaKnown RBP21.63■■□□□ 1.05
VEGFA-205ENST00000372067 AMOTL2Q9Y2J4 779 aa21.62■■□□□ 1.05
VEGFA-205ENST00000372067 PCDHB15Q9Y5E8 787 aa21.62■■□□□ 1.05
VEGFA-205ENST00000372067 SULT6B1Q6IMI4 303 aa21.61■■□□□ 1.05
VEGFA-205ENST00000372067 FGD1P98174 961 aa21.61■■□□□ 1.05
VEGFA-205ENST00000372067 MVPQ14764 893 aaKnown RBP21.61■■□□□ 1.05
VEGFA-205ENST00000372067 LTV1Q96GA3 475 aaPredicted RBP21.61■■□□□ 1.05
VEGFA-205ENST00000372067 CALD1Q05682 793 aaKnown RBP21.6■■□□□ 1.05
VEGFA-205ENST00000372067 ZNF692Q9BU19 519 aaPredicted RBP21.6■■□□□ 1.05
VEGFA-205ENST00000372067 NFE2L2Q16236 605 aa21.6■■□□□ 1.05
VEGFA-205ENST00000372067 RBM33Q96EV2 1170 aaKnown RBP21.6■■□□□ 1.05
VEGFA-205ENST00000372067 PLEKHF1Q96S99 279 aa21.6■■□□□ 1.05
VEGFA-205ENST00000372067 AMPHP49418 695 aa21.59■■□□□ 1.05
VEGFA-205ENST00000372067 PDZRN3Q9UPQ7 1066 aa21.59■■□□□ 1.05
VEGFA-205ENST00000372067 ACEP12821 1306 aa21.59■■□□□ 1.05
VEGFA-205ENST00000372067 FAM83GA6ND36 823 aa21.59■■□□□ 1.05
VEGFA-205ENST00000372067 TRIM27P14373 513 aa21.58■■□□□ 1.05
VEGFA-205ENST00000372067 ATF7IPQ6VMQ6 1270 aa21.58■■□□□ 1.05
VEGFA-205ENST00000372067 LMOD2Q6P5Q4 547 aa21.58■■□□□ 1.04
VEGFA-205ENST00000372067 TMEM2Q9UHN6 1383 aa21.57■■□□□ 1.04
VEGFA-205ENST00000372067 RRAGDQ9NQL2 400 aaPredicted RBP21.57■■□□□ 1.04
VEGFA-205ENST00000372067 DDX19BQ9UMR2 479 aa21.57■■□□□ 1.04
VEGFA-205ENST00000372067 TMEM57Q8N5G2 664 aa21.56■■□□□ 1.04
VEGFA-205ENST00000372067 THEMISQ8N1K5 641 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-205ENST00000372067 GNAI1P63096 354 aa21.55■■□□□ 1.04
VEGFA-205ENST00000372067 LMOD3Q0VAK6 560 aa21.55■■□□□ 1.04
VEGFA-205ENST00000372067 AEBP1Q8IUX7 1158 aa21.55■■□□□ 1.04
VEGFA-205ENST00000372067 PHF23Q9BUL5 403 aaPredicted RBP21.54■■□□□ 1.04
VEGFA-205ENST00000372067 ARHGEF40Q8TER5 1519 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms