RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 PAK3O75914 559 aaPredicted RBP24.13■■□□□ 1.45
VPS37B-202ENST00000371248 TTC21BQ7Z4L5 1316 aa24.12■■□□□ 1.45
VPS37B-202ENST00000371248 SSH2Q76I76 1423 aa24.12■■□□□ 1.45
VPS37B-202ENST00000371248 CNGB1Q14028 1251 aaPredicted RBP24.11■■□□□ 1.45
VPS37B-202ENST00000371248 DIEXFQ68CQ4 756 aaKnown RBP24.11■■□□□ 1.45
VPS37B-202ENST00000371248 PXDNQ92626 1479 aa24.1■■□□□ 1.45
VPS37B-202ENST00000371248 TRPM3Q9HCF6 1732 aaPredicted RBP24.1■■□□□ 1.45
VPS37B-202ENST00000371248 CGNL1Q0VF96 1302 aa24.1■■□□□ 1.45
VPS37B-202ENST00000371248 BRD4O60885 1362 aaPredicted RBP24.1■■□□□ 1.45
VPS37B-202ENST00000371248 KIF20BQ96Q89 1820 aa24.09■■□□□ 1.45
VPS37B-202ENST00000371248 AMER1Q5JTC6 1135 aaPredicted RBP24.09■■□□□ 1.45
VPS37B-202ENST00000371248 SOS2Q07890 1332 aaPredicted RBP24.08■■□□□ 1.45
VPS37B-202ENST00000371248 TTC21AQ8NDW8 1320 aa24.08■■□□□ 1.44
VPS37B-202ENST00000371248 FYB1O15117 783 aa24.07■■□□□ 1.44
VPS37B-202ENST00000371248 NME9Q86XW9 330 aa24.07■■□□□ 1.44
VPS37B-202ENST00000371248 AHDC1Q5TGY3 1603 aaPredicted RBP24.07■■□□□ 1.44
VPS37B-202ENST00000371248 CC2D1BQ5T0F9 858 aaKnown RBP24.07■■□□□ 1.44
VPS37B-202ENST00000371248 PHLPP1O60346 1717 aa24.06■■□□□ 1.44
VPS37B-202ENST00000371248 ABTB2Q8N961 1025 aa24.06■■□□□ 1.44
VPS37B-202ENST00000371248 GGNBP2Q9H3C7 697 aa24.06■■□□□ 1.44
VPS37B-202ENST00000371248 LMOD2Q6P5Q4 547 aa24.05■■□□□ 1.44
VPS37B-202ENST00000371248 SBNO1A3KN83 1393 aa24.04■■□□□ 1.44
VPS37B-202ENST00000371248 PIK3C2AO00443 1686 aa24.04■■□□□ 1.44
VPS37B-202ENST00000371248 ZRANB1Q9UGI0 708 aa24.04■■□□□ 1.44
VPS37B-202ENST00000371248 NUTM2GQ5VZR2 741 aa24.03■■□□□ 1.44
VPS37B-202ENST00000371248 ALS2Q96Q42 1657 aa24.03■■□□□ 1.44
VPS37B-202ENST00000371248 SPATA31A3Q5VYP0 1347 aa24.02■■□□□ 1.44
VPS37B-202ENST00000371248 NPC1L1Q9UHC9 1359 aa24.02■■□□□ 1.44
VPS37B-202ENST00000371248 TNS3Q68CZ2 1445 aa24.01■■□□□ 1.43
VPS37B-202ENST00000371248 ANKRD26Q9UPS8 1709 aa24.01■■□□□ 1.43
VPS37B-202ENST00000371248 NSD2O96028 1365 aa24.01■■□□□ 1.43
VPS37B-202ENST00000371248 NLRP6P59044 892 aa24.01■■□□□ 1.43
VPS37B-202ENST00000371248 LRRC59Q96AG4 307 aaKnown RBP23.99■■□□□ 1.43
VPS37B-202ENST00000371248 COG3Q96JB2 828 aa23.99■■□□□ 1.43
VPS37B-202ENST00000371248 COL16A1Q07092 1604 aaPredicted RBP23.99■■□□□ 1.43
VPS37B-202ENST00000371248 ANP32CO43423 234 aa23.98■■□□□ 1.43
VPS37B-202ENST00000371248 MORC1Q86VD1 984 aa23.98■■□□□ 1.43
VPS37B-202ENST00000371248 USP31Q70CQ4 1352 aa23.98■■□□□ 1.43
VPS37B-202ENST00000371248 NLRP13Q86W25 1043 aa23.97■■□□□ 1.43
VPS37B-202ENST00000371248 MARF1Q9Y4F3 1742 aaKnown RBP23.97■■□□□ 1.43
VPS37B-202ENST00000371248 PLEKHG5O94827 1062 aa23.96■■□□□ 1.43
VPS37B-202ENST00000371248 ARHGEF10O15013 1369 aa23.96■■□□□ 1.43
VPS37B-202ENST00000371248 OVOS2A0A0J9YW53 1432 aa23.95■■□□□ 1.43
VPS37B-202ENST00000371248 OVOS2Q6IE36 1432 aa23.95■■□□□ 1.43
VPS37B-202ENST00000371248 USP54Q70EL1 1684 aa23.95■■□□□ 1.42
VPS37B-202ENST00000371248 PRKRIP1Q9H875 184 aaPredicted RBP23.95■■□□□ 1.42
VPS37B-202ENST00000371248 TNNT2P45379 298 aaPredicted RBP23.94■■□□□ 1.42
VPS37B-202ENST00000371248 PARD3Q8TEW0 1356 aa23.93■■□□□ 1.42
VPS37B-202ENST00000371248 RALBP1Q15311 655 aa23.93■■□□□ 1.42
VPS37B-202ENST00000371248 HSPA1LP34931 641 aa23.92■■□□□ 1.42
VPS37B-202ENST00000371248 SOX12O15370 315 aa23.91■■□□□ 1.42
VPS37B-202ENST00000371248 CABLES1Q8TDN4 633 aa23.9■■□□□ 1.42
VPS37B-202ENST00000371248 MED1Q15648 1581 aaPredicted RBP23.89■■□□□ 1.42
VPS37B-202ENST00000371248 FBLN1P23142 703 aa23.89■■□□□ 1.41
VPS37B-202ENST00000371248 MAP2P11137 1827 aaKnown RBP23.89■■□□□ 1.41
VPS37B-202ENST00000371248 USP19O94966 1318 aa23.89■■□□□ 1.41
VPS37B-202ENST00000371248 PNPLA6Q8IY17 1366 aa23.88■■□□□ 1.41
VPS37B-202ENST00000371248 FBXO41Q8TF61 875 aa23.88■■□□□ 1.41
VPS37B-202ENST00000371248 CRYBG1Q9Y4K1 1723 aa23.88■■□□□ 1.41
VPS37B-202ENST00000371248 GCP02774 474 aa23.87■■□□□ 1.41
VPS37B-202ENST00000371248 PHRF1Q9P1Y6 1649 aaKnown RBP23.86■■□□□ 1.41
VPS37B-202ENST00000371248 SLIT3O75094 1523 aa23.86■■□□□ 1.41
VPS37B-202ENST00000371248 KCNH5Q8NCM2 988 aa23.86■■□□□ 1.41
VPS37B-202ENST00000371248 COL22A1Q8NFW1 1626 aaPredicted RBP23.86■■□□□ 1.41
VPS37B-202ENST00000371248 PPP2R1AP30153 589 aa23.85■■□□□ 1.41
VPS37B-202ENST00000371248 MIER1Q8N108 512 aa23.85■■□□□ 1.41
VPS37B-202ENST00000371248 SHPRHQ149N8 1683 aa23.84■■□□□ 1.41
VPS37B-202ENST00000371248 ABCA3Q99758 1704 aa23.84■■□□□ 1.41
VPS37B-202ENST00000371248 HAP1P54257 671 aaPredicted RBP23.83■■□□□ 1.41
VPS37B-202ENST00000371248 MYBBP1AQ9BQG0 1328 aaKnown RBP23.83■■□□□ 1.41
VPS37B-202ENST00000371248 AATKQ6ZMQ8 1374 aa23.83■■□□□ 1.4
VPS37B-202ENST00000371248 JCADQ9P266 1359 aa23.83■■□□□ 1.4
VPS37B-202ENST00000371248 RRS1Q15050 365 aaKnown RBP23.82■■□□□ 1.4
VPS37B-202ENST00000371248 NFAT5O94916 1531 aa23.82■■□□□ 1.4
VPS37B-202ENST00000371248 LTN1O94822 1766 aa23.81■■□□□ 1.4
VPS37B-202ENST00000371248 POLKQ9UBT6 870 aa23.8■■□□□ 1.4
VPS37B-202ENST00000371248 ZC3H6P61129 1189 aaKnown RBP23.8■■□□□ 1.4
VPS37B-202ENST00000371248 EMILIN1Q9Y6C2 1016 aa23.79■■□□□ 1.4
VPS37B-202ENST00000371248 ZBTB7CA1YPR0 619 aa23.79■■□□□ 1.4
VPS37B-202ENST00000371248 PPM1GO15355 546 aaPredicted RBP23.79■■□□□ 1.4
VPS37B-202ENST00000371248 MTHFSP49914 203 aa23.79■■□□□ 1.4
VPS37B-202ENST00000371248 MAP3K19Q56UN5 1328 aa23.78■■□□□ 1.4
VPS37B-202ENST00000371248 NUTM2BA6NNL0 878 aaPredicted RBP23.77■■□□□ 1.4
VPS37B-202ENST00000371248 NUTM2EB1AL46 878 aaPredicted RBP23.77■■□□□ 1.4
VPS37B-202ENST00000371248 NUTM2AQ8IVF1 878 aaPredicted RBP23.77■■□□□ 1.4
VPS37B-202ENST00000371248 ARHGEF25Q86VW2 580 aa23.76■■□□□ 1.39
VPS37B-202ENST00000371248 AMPHP49418 695 aa23.74■■□□□ 1.39
VPS37B-202ENST00000371248 PEAK1Q9H792 1746 aa23.74■■□□□ 1.39
VPS37B-202ENST00000371248 KIAA0232Q92628 1395 aa23.74■■□□□ 1.39
VPS37B-202ENST00000371248 SMG6Q86US8 1419 aaKnown RBP23.73■■□□□ 1.39
VPS37B-202ENST00000371248 SPATA31A6Q5VVP1 1343 aa23.72■■□□□ 1.39
VPS37B-202ENST00000371248 CPDO75976 1380 aa23.72■■□□□ 1.39
VPS37B-202ENST00000371248 CCDC184Q52MB2 194 aa23.72■■□□□ 1.39
VPS37B-202ENST00000371248 PRDM11Q9NQV5 511 aa23.71■■□□□ 1.39
VPS37B-202ENST00000371248 ADAMTS2O95450 1211 aa23.71■■□□□ 1.39
VPS37B-202ENST00000371248 CHRNA2Q15822 529 aa23.71■■□□□ 1.39
VPS37B-202ENST00000371248 HOXC9P31274 260 aa23.7■■□□□ 1.38
VPS37B-202ENST00000371248 RGPD5Q99666 1765 aa23.7■■□□□ 1.38
VPS37B-202ENST00000371248 FLT4P35916 1363 aa23.7■■□□□ 1.38
VPS37B-202ENST00000371248 KIF24Q5T7B8 1368 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms