RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 ADAMTSL3P82987 1691 aa13.02□□□□□ -0.33
PRPF38B-203ENST00000370025 ARXQ96QS3 562 aa13.02□□□□□ -0.33
PRPF38B-203ENST00000370025 RNF123Q5XPI4 1314 aa13.02□□□□□ -0.33
PRPF38B-203ENST00000370025 APAF1O14727 1248 aa13.01□□□□□ -0.33
PRPF38B-203ENST00000370025 SKAP1Q86WV1 359 aa13.01□□□□□ -0.33
PRPF38B-203ENST00000370025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.01□□□□□ -0.33
PRPF38B-203ENST00000370025 RCAN3Q9UKA8 241 aa13.01□□□□□ -0.33
PRPF38B-203ENST00000370025 PTPRUQ92729 1446 aa13.01□□□□□ -0.33
PRPF38B-203ENST00000370025 KIF20BQ96Q89 1820 aa13.01□□□□□ -0.33
PRPF38B-203ENST00000370025 SETD1BQ9UPS6 1966 aaKnown RBP13.01□□□□□ -0.33
PRPF38B-203ENST00000370025 GOLGA2Q08379 1002 aa13□□□□□ -0.33
PRPF38B-203ENST00000370025 CPSF1Q10570 1443 aaKnown RBP13□□□□□ -0.33
PRPF38B-203ENST00000370025 ANKLE2Q86XL3 938 aa13□□□□□ -0.33
PRPF38B-203ENST00000370025 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
PRPF38B-203ENST00000370025 EDC4Q6P2E9 1401 aaKnown RBP13□□□□□ -0.33
PRPF38B-203ENST00000370025 PKNOX2Q96KN3 472 aa13□□□□□ -0.33
PRPF38B-203ENST00000370025 ADGRB2O60241 1585 aa12.99□□□□□ -0.33
PRPF38B-203ENST00000370025 SHPRHQ149N8 1683 aa12.99□□□□□ -0.33
PRPF38B-203ENST00000370025 RUNDC1Q96C34 613 aa12.99□□□□□ -0.33
PRPF38B-203ENST00000370025 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
PRPF38B-203ENST00000370025 PTCH1Q13635 1447 aa12.98□□□□□ -0.33
PRPF38B-203ENST00000370025 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
PRPF38B-203ENST00000370025 ZNF521Q96K83 1311 aa12.98□□□□□ -0.33
PRPF38B-203ENST00000370025 PIK3R4Q99570 1358 aa12.98□□□□□ -0.33
PRPF38B-203ENST00000370025 U2AF1L5P0DN76 240 aaPredicted RBP12.97□□□□□ -0.33
PRPF38B-203ENST00000370025 U2AF1Q01081 240 aaKnown RBP eCLIP12.97□□□□□ -0.339e-7■■■□□ 17.6
PRPF38B-203ENST00000370025 PRR36Q9H6K5 1346 aa12.97□□□□□ -0.33
PRPF38B-203ENST00000370025 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
PRPF38B-203ENST00000370025 ZNF142P52746 1687 aaPredicted RBP12.96□□□□□ -0.33
PRPF38B-203ENST00000370025 ITSN1Q15811 1721 aa12.96□□□□□ -0.33
PRPF38B-203ENST00000370025 RRP1P56182 461 aaKnown RBP12.95□□□□□ -0.34
PRPF38B-203ENST00000370025 PLEKHG3A1L390 1219 aa12.95□□□□□ -0.34
PRPF38B-203ENST00000370025 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
PRPF38B-203ENST00000370025 SLFN5Q08AF3 891 aa12.95□□□□□ -0.34
PRPF38B-203ENST00000370025 FRAT1Q92837 279 aaPredicted RBP12.95□□□□□ -0.34
PRPF38B-203ENST00000370025 AKAP12Q02952 1782 aa12.95□□□□□ -0.34
PRPF38B-203ENST00000370025 MON2Q7Z3U7 1717 aa12.94□□□□□ -0.34
PRPF38B-203ENST00000370025 U2SURPO15042 1029 aaKnown RBP12.94□□□□□ -0.34
PRPF38B-203ENST00000370025 COG3Q96JB2 828 aa12.94□□□□□ -0.34
PRPF38B-203ENST00000370025 GSE1Q14687 1217 aa12.94□□□□□ -0.34
PRPF38B-203ENST00000370025 DUSP27Q5VZP5 1158 aa12.94□□□□□ -0.34
PRPF38B-203ENST00000370025 NME9Q86XW9 330 aa12.94□□□□□ -0.34
PRPF38B-203ENST00000370025 DIAPH1O60610 1272 aaKnown RBP12.94□□□□□ -0.34
PRPF38B-203ENST00000370025 TCP11L2Q8N4U5 519 aa12.94□□□□□ -0.34
PRPF38B-203ENST00000370025 DAXXQ9UER7 740 aaPredicted RBP12.94□□□□□ -0.34
PRPF38B-203ENST00000370025 E9PSI1 815 aa12.93□□□□□ -0.34
PRPF38B-203ENST00000370025 KCNA6P17658 529 aa12.93□□□□□ -0.34
PRPF38B-203ENST00000370025 ACEP12821 1306 aa12.93□□□□□ -0.34
PRPF38B-203ENST00000370025 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
PRPF38B-203ENST00000370025 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
PRPF38B-203ENST00000370025 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
PRPF38B-203ENST00000370025 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
PRPF38B-203ENST00000370025 WWC1Q8IX03 1113 aa12.92□□□□□ -0.34
PRPF38B-203ENST00000370025 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
PRPF38B-203ENST00000370025 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
PRPF38B-203ENST00000370025 PNPLA6Q8IY17 1366 aa12.92□□□□□ -0.34
PRPF38B-203ENST00000370025 PDE4AP27815 886 aa12.92□□□□□ -0.34
PRPF38B-203ENST00000370025 TOPAZ1Q8N9V7 1692 aa12.91□□□□□ -0.34
PRPF38B-203ENST00000370025 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
PRPF38B-203ENST00000370025 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
PRPF38B-203ENST00000370025 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
PRPF38B-203ENST00000370025 MAP2P11137 1827 aaKnown RBP12.91□□□□□ -0.34
PRPF38B-203ENST00000370025 TTC21BQ7Z4L5 1316 aa12.91□□□□□ -0.34
PRPF38B-203ENST00000370025 RRP7AQ9Y3A4 280 aaKnown RBP12.9□□□□□ -0.34
PRPF38B-203ENST00000370025 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
PRPF38B-203ENST00000370025 MAPK8IP3Q9UPT6 1336 aa12.9□□□□□ -0.34
PRPF38B-203ENST00000370025 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
PRPF38B-203ENST00000370025 CCDC27Q2M243 656 aa12.9□□□□□ -0.35
PRPF38B-203ENST00000370025 IQSEC2Q5JU85 1478 aa12.9□□□□□ -0.35
PRPF38B-203ENST00000370025 NGDNQ8NEJ9 315 aaKnown RBP12.89□□□□□ -0.35
PRPF38B-203ENST00000370025 FBLN1P23142 703 aa12.89□□□□□ -0.35
PRPF38B-203ENST00000370025 NFKBIBQ15653 356 aa12.89□□□□□ -0.35
PRPF38B-203ENST00000370025 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
PRPF38B-203ENST00000370025 EXOC6Q8TAG9 804 aa12.89□□□□□ -0.35
PRPF38B-203ENST00000370025 USP6P35125 1406 aa12.89□□□□□ -0.35
PRPF38B-203ENST00000370025 CHD2O14647 1828 aaKnown RBP12.89□□□□□ -0.35
PRPF38B-203ENST00000370025 PMFBP1Q8TBY8 1022 aa12.88□□□□□ -0.35
PRPF38B-203ENST00000370025 NKTRP30414 1462 aaKnown RBP12.88□□□□□ -0.35
PRPF38B-203ENST00000370025 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
PRPF38B-203ENST00000370025 NPHP4O75161 1426 aaPredicted RBP12.88□□□□□ -0.35
PRPF38B-203ENST00000370025 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.87□□□□□ -0.35
PRPF38B-203ENST00000370025 EMILIN1Q9Y6C2 1016 aa12.87□□□□□ -0.35
PRPF38B-203ENST00000370025 ANKARQ7Z5J8 1434 aa12.87□□□□□ -0.35
PRPF38B-203ENST00000370025 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
PRPF38B-203ENST00000370025 TTC21AQ8NDW8 1320 aa12.87□□□□□ -0.35
PRPF38B-203ENST00000370025 FCHSD2O94868 740 aa12.87□□□□□ -0.35
PRPF38B-203ENST00000370025 PLEKHF1Q96S99 279 aa12.87□□□□□ -0.35
PRPF38B-203ENST00000370025 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
PRPF38B-203ENST00000370025 CDK12Q9NYV4 1490 aaPredicted RBP12.86□□□□□ -0.35
PRPF38B-203ENST00000370025 NRKQ7Z2Y5 1582 aa12.85□□□□□ -0.35
PRPF38B-203ENST00000370025 USP35Q9P2H5 1018 aa12.85□□□□□ -0.35
PRPF38B-203ENST00000370025 RGPD8O14715 1765 aaPredicted RBP12.85□□□□□ -0.35
PRPF38B-203ENST00000370025 PLIN1O60240 522 aa12.85□□□□□ -0.35
PRPF38B-203ENST00000370025 TMPOP42166 694 aaKnown RBP12.85□□□□□ -0.35
PRPF38B-203ENST00000370025 RRS1Q15050 365 aaKnown RBP12.85□□□□□ -0.35
PRPF38B-203ENST00000370025 MYH16Q9H6N6 1097 aa12.84□□□□□ -0.35
PRPF38B-203ENST00000370025 FMN2Q9NZ56 1722 aa12.84□□□□□ -0.35
PRPF38B-203ENST00000370025 SSH2Q76I76 1423 aa12.83□□□□□ -0.36
PRPF38B-203ENST00000370025 IL13P35225 146 aa12.83□□□□□ -0.36
PRPF38B-203ENST00000370025 OVOS2A0A0J9YW53 1432 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms