RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 CCDC110Q8TBZ0 833 aa10.28□□□□□ -0.76
VANGL1-204ENST00000369510 LMOD3Q0VAK6 560 aa10.28□□□□□ -0.76
VANGL1-204ENST00000369510 CENPHQ9H3R5 247 aa10.28□□□□□ -0.76
VANGL1-204ENST00000369510 CCER2I3L3R5 266 aa10.28□□□□□ -0.76
VANGL1-204ENST00000369510 WDR63Q8IWG1 891 aa10.28□□□□□ -0.76
VANGL1-204ENST00000369510 BBXQ8WY36 941 aaPredicted RBP10.28□□□□□ -0.76
VANGL1-204ENST00000369510 FRAT2O75474 233 aaPredicted RBP10.28□□□□□ -0.76
VANGL1-204ENST00000369510 SMARCC1Q92922 1105 aaPredicted RBP10.28□□□□□ -0.76
VANGL1-204ENST00000369510 GIMAP4Q9NUV9 329 aa10.28□□□□□ -0.76
VANGL1-204ENST00000369510 SSX2IPQ9Y2D8 614 aa10.28□□□□□ -0.76
VANGL1-204ENST00000369510 CEP83Q9Y592 693 aa10.27□□□□□ -0.77
VANGL1-204ENST00000369510 PDIA4P13667 645 aaKnown RBP10.27□□□□□ -0.77
VANGL1-204ENST00000369510 ATP6V1E1P36543 226 aa10.27□□□□□ -0.77
VANGL1-204ENST00000369510 SLC4A3P48751 1232 aa10.27□□□□□ -0.77
VANGL1-204ENST00000369510 CHMP2AO43633 222 aa10.27□□□□□ -0.77
VANGL1-204ENST00000369510 MCM6Q14566 821 aa10.27□□□□□ -0.77
VANGL1-204ENST00000369510 HDGFL2Q7Z4V5 671 aaPredicted RBP10.27□□□□□ -0.77
VANGL1-204ENST00000369510 TSNARE1Q96NA8 513 aa10.27□□□□□ -0.77
VANGL1-204ENST00000369510 TOMM22Q9NS69 142 aa10.27□□□□□ -0.77
VANGL1-204ENST00000369510 CLIP2Q9UDT6 1046 aa10.27□□□□□ -0.77
VANGL1-204ENST00000369510 CCDC9Q9Y3X0 531 aaKnown RBP10.27□□□□□ -0.77
VANGL1-204ENST00000369510 KIF5AQ12840 1032 aa10.26□□□□□ -0.77
VANGL1-204ENST00000369510 MGEA5O60502 916 aa10.26□□□□□ -0.77
VANGL1-204ENST00000369510 CRACR2AQ9BSW2 395 aa10.26□□□□□ -0.77
VANGL1-204ENST00000369510 PDS5BQ9NTI5 1447 aa10.26□□□□□ -0.77
VANGL1-204ENST00000369510 TMCO3Q6UWJ1 677 aa10.26□□□□□ -0.77
VANGL1-204ENST00000369510 ZC4H2Q9NQZ6 224 aa10.26□□□□□ -0.77
VANGL1-204ENST00000369510 MPHOSPH10O00566 681 aaKnown RBP10.25□□□□□ -0.77
VANGL1-204ENST00000369510 MBD3O95983 291 aa10.25□□□□□ -0.77
VANGL1-204ENST00000369510 RNF214Q8ND24 703 aa10.25□□□□□ -0.77
VANGL1-204ENST00000369510 IMMTQ16891 758 aaKnown RBP10.25□□□□□ -0.77
VANGL1-204ENST00000369510 SLKQ9H2G2 1235 aaPredicted RBP10.25□□□□□ -0.77
VANGL1-204ENST00000369510 POTEB2H3BUK9 544 aa10.25□□□□□ -0.77
VANGL1-204ENST00000369510 DIAPH1O60610 1272 aaKnown RBP10.25□□□□□ -0.77
VANGL1-204ENST00000369510 BICD2Q8TD16 824 aa10.25□□□□□ -0.77
VANGL1-204ENST00000369510 AIMP1Q12904 312 aaKnown RBP10.24□□□□□ -0.77
VANGL1-204ENST00000369510 CAPZA3Q96KX2 299 aa10.24□□□□□ -0.77
VANGL1-204ENST00000369510 CBFA2T2O43439 604 aa10.24□□□□□ -0.77
VANGL1-204ENST00000369510 MRVI1Q9Y6F6 885 aa10.24□□□□□ -0.77
VANGL1-204ENST00000369510 SMC2O95347 1197 aa10.24□□□□□ -0.77
VANGL1-204ENST00000369510 TICAM2Q86XR7 235 aa10.24□□□□□ -0.77
VANGL1-204ENST00000369510 RAB3IPQ96QF0 476 aaPredicted RBP10.24□□□□□ -0.77
VANGL1-204ENST00000369510 TTC12Q9H892 705 aaPredicted RBP10.24□□□□□ -0.77
VANGL1-204ENST00000369510 CFAP58Q5T655 872 aa10.24□□□□□ -0.77
VANGL1-204ENST00000369510 CEP120Q8N960 986 aa10.24□□□□□ -0.77
VANGL1-204ENST00000369510 JMYQ8N9B5 988 aa10.24□□□□□ -0.77
VANGL1-204ENST00000369510 GOLGA1Q92805 767 aa10.24□□□□□ -0.77
VANGL1-204ENST00000369510 CUX2O14529 1486 aa10.24□□□□□ -0.77
VANGL1-204ENST00000369510 MCTP1Q6DN14 999 aa10.23□□□□□ -0.77
VANGL1-204ENST00000369510 RPUSD2Q8IZ73 545 aaKnown RBP10.23□□□□□ -0.77
VANGL1-204ENST00000369510 SMARCA2P51531 1590 aa10.23□□□□□ -0.77
VANGL1-204ENST00000369510 DCAF8L1A6NGE4 600 aa10.23□□□□□ -0.77
VANGL1-204ENST00000369510 GMNNO75496 209 aa10.23□□□□□ -0.77
VANGL1-204ENST00000369510 CCDC14Q49A88 953 aa10.23□□□□□ -0.77
VANGL1-204ENST00000369510 RABGAP1Q9Y3P9 1069 aa10.23□□□□□ -0.77
VANGL1-204ENST00000369510 ROCK1Q13464 1354 aa10.23□□□□□ -0.77
VANGL1-204ENST00000369510 CSB-PGBD3P0DP91 1061 aa10.23□□□□□ -0.77
VANGL1-204ENST00000369510 MORC1Q86VD1 984 aa10.23□□□□□ -0.77
VANGL1-204ENST00000369510 LIG1P18858 919 aa10.23□□□□□ -0.77
VANGL1-204ENST00000369510 TMEM132AQ24JP5 1023 aa10.23□□□□□ -0.77
VANGL1-204ENST00000369510 DCAF11Q8TEB1 546 aa10.23□□□□□ -0.77
VANGL1-204ENST00000369510 PDCP20941 246 aa10.22□□□□□ -0.77
VANGL1-204ENST00000369510 C10orf67Q8IYJ2 551 aa10.22□□□□□ -0.77
VANGL1-204ENST00000369510 CARMIL1Q5VZK9 1371 aa10.22□□□□□ -0.77
VANGL1-204ENST00000369510 MAP3K9P80192 1104 aa10.22□□□□□ -0.77
VANGL1-204ENST00000369510 NAA16Q6N069 864 aaPredicted RBP10.22□□□□□ -0.77
VANGL1-204ENST00000369510 NSRP1Q9H0G5 558 aaKnown RBP10.22□□□□□ -0.77
VANGL1-204ENST00000369510 KIF4BQ2VIQ3 1234 aa10.22□□□□□ -0.77
VANGL1-204ENST00000369510 CCDC148Q8NFR7 591 aa10.22□□□□□ -0.77
VANGL1-204ENST00000369510 ARHGAP35Q9NRY4 1499 aa10.21□□□□□ -0.77
VANGL1-204ENST00000369510 SOX12O15370 315 aa10.21□□□□□ -0.77
VANGL1-204ENST00000369510 PAK3O75914 559 aaPredicted RBP10.21□□□□□ -0.77
VANGL1-204ENST00000369510 LIMCH1Q9UPQ0 1083 aa10.21□□□□□ -0.77
VANGL1-204ENST00000369510 EID1Q9Y6B2 187 aa10.21□□□□□ -0.77
VANGL1-204ENST00000369510 CDK5RAP3Q96JB5 506 aa10.21□□□□□ -0.77
VANGL1-204ENST00000369510 CALCOCO2Q13137 446 aa10.21□□□□□ -0.77
VANGL1-204ENST00000369510 GOLIM4O00461 696 aa10.21□□□□□ -0.77
VANGL1-204ENST00000369510 GGT6Q6P531 493 aa10.21□□□□□ -0.77
VANGL1-204ENST00000369510 TRIM5Q9C035 493 aa10.21□□□□□ -0.77
VANGL1-204ENST00000369510 TAF4BQ92750 862 aa10.21□□□□□ -0.78
VANGL1-204ENST00000369510 CCDC172P0C7W6 258 aa10.21□□□□□ -0.78
VANGL1-204ENST00000369510 FOXD4L1Q9NU39 408 aa10.21□□□□□ -0.78
VANGL1-204ENST00000369510 MAP7Q14244 749 aa10.2□□□□□ -0.78
VANGL1-204ENST00000369510 KLHL10Q6JEL2 608 aa10.2□□□□□ -0.78
VANGL1-204ENST00000369510 HSPA4P34932 840 aa10.2□□□□□ -0.78
VANGL1-204ENST00000369510 PPFIBP1Q86W92 1011 aa10.2□□□□□ -0.78
VANGL1-204ENST00000369510 ZNF710Q8N1W2 664 aa10.2□□□□□ -0.78
VANGL1-204ENST00000369510 EIF2AQ9BY44 585 aaKnown RBP10.2□□□□□ -0.78
VANGL1-204ENST00000369510 DNAJC8O75937 253 aaPredicted RBP10.2□□□□□ -0.78
VANGL1-204ENST00000369510 MRE11P49959 708 aa10.2□□□□□ -0.78
VANGL1-204ENST00000369510 IRX3P78415 501 aaPredicted RBP10.2□□□□□ -0.78
VANGL1-204ENST00000369510 VPS36Q86VN1 386 aa10.2□□□□□ -0.78
VANGL1-204ENST00000369510 ANKS4BQ8N8V4 417 aa10.2□□□□□ -0.78
VANGL1-204ENST00000369510 PSMD1Q99460 953 aa10.2□□□□□ -0.78
VANGL1-204ENST00000369510 KIF4AO95239 1232 aa10.2□□□□□ -0.78
VANGL1-204ENST00000369510 TAF7Q15545 349 aaPredicted RBP10.2□□□□□ -0.78
VANGL1-204ENST00000369510 PIBF1Q8WXW3 757 aa10.2□□□□□ -0.78
VANGL1-204ENST00000369510 STMN4Q9H169 189 aaPredicted RBP10.2□□□□□ -0.78
VANGL1-204ENST00000369510 DHX16O60231 1041 aaKnown RBP10.2□□□□□ -0.78
VANGL1-204ENST00000369510 IVLP07476 585 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms