RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 TXLNAP40222 546 aa18.81■□□□□ 0.6
PRDM1-203ENST00000369096 HMGN5P82970 282 aaKnown RBP18.81■□□□□ 0.6
PRDM1-203ENST00000369096 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
PRDM1-203ENST00000369096 SEPT7Q16181 437 aaKnown RBP18.81■□□□□ 0.6
PRDM1-203ENST00000369096 CCDC144AA2RUR9 1427 aa18.8■□□□□ 0.6
PRDM1-203ENST00000369096 GOLGA6L10A6NI86 522 aa18.8■□□□□ 0.6
PRDM1-203ENST00000369096 FIBPO43427 364 aa18.8■□□□□ 0.6
PRDM1-203ENST00000369096 PSME1Q06323 249 aa18.8■□□□□ 0.6
PRDM1-203ENST00000369096 ZNHIT6Q9NWK9 470 aaKnown RBP18.8■□□□□ 0.6
PRDM1-203ENST00000369096 RAPGEF4Q8WZA2 1011 aa18.8■□□□□ 0.6
PRDM1-203ENST00000369096 LETM1O95202 739 aaPredicted RBP18.8■□□□□ 0.6
PRDM1-203ENST00000369096 WWC2Q6AWC2 1192 aa18.8■□□□□ 0.6
PRDM1-203ENST00000369096 NEK4P51957 841 aa18.79■□□□□ 0.6
PRDM1-203ENST00000369096 CLASRPQ8N2M8 674 aaKnown RBP18.79■□□□□ 0.6
PRDM1-203ENST00000369096 GOLGA6L7A0A1B0GV03 622 aa18.79■□□□□ 0.6
PRDM1-203ENST00000369096 KIAA0754O94854 1291 aa18.79■□□□□ 0.6
PRDM1-203ENST00000369096 PRPF40AO75400 957 aaKnown RBP18.79■□□□□ 0.6
PRDM1-203ENST00000369096 PDCP20941 246 aa18.79■□□□□ 0.6
PRDM1-203ENST00000369096 STK38Q15208 465 aa18.79■□□□□ 0.6
PRDM1-203ENST00000369096 TSPY26PQ9H489 355 aa18.79■□□□□ 0.6
PRDM1-203ENST00000369096 RBM10P98175 930 aaKnown RBP18.78■□□□□ 0.6
PRDM1-203ENST00000369096 ENOX2Q16206 610 aaKnown RBP18.78■□□□□ 0.6
PRDM1-203ENST00000369096 DHX37Q8IY37 1157 aaKnown RBP18.78■□□□□ 0.6
PRDM1-203ENST00000369096 CNTROBQ8N137 903 aa18.78■□□□□ 0.6
PRDM1-203ENST00000369096 SPC24Q8NBT2 197 aa18.78■□□□□ 0.6
PRDM1-203ENST00000369096 TBC1D2BQ9UPU7 963 aa18.78■□□□□ 0.6
PRDM1-203ENST00000369096 PIP4K2AP48426 406 aaPredicted RBP18.78■□□□□ 0.6
PRDM1-203ENST00000369096 CEBPZQ03701 1054 aaKnown RBP18.78■□□□□ 0.6
PRDM1-203ENST00000369096 PANK1Q8TE04 598 aa18.78■□□□□ 0.6
PRDM1-203ENST00000369096 RUNDC1Q96C34 613 aa18.78■□□□□ 0.6
PRDM1-203ENST00000369096 HMOX1P09601 288 aa18.77■□□□□ 0.6
PRDM1-203ENST00000369096 TAX1BP1Q86VP1 789 aa18.77■□□□□ 0.6
PRDM1-203ENST00000369096 NINLQ9Y2I6 1382 aa18.77■□□□□ 0.6
PRDM1-203ENST00000369096 LRRC9Q6ZRR7 1453 aa18.77■□□□□ 0.59
PRDM1-203ENST00000369096 SERPINC1P01008 464 aa18.76■□□□□ 0.59
PRDM1-203ENST00000369096 SURF6O75683 361 aaKnown RBP18.76■□□□□ 0.59
PRDM1-203ENST00000369096 ANKRD18AQ8IVF6 992 aa18.76■□□□□ 0.59
PRDM1-203ENST00000369096 CENPHQ9H3R5 247 aa18.76■□□□□ 0.59
PRDM1-203ENST00000369096 CCDC181Q5TID7 509 aa18.75■□□□□ 0.59
PRDM1-203ENST00000369096 DNAJC2Q99543 621 aaKnown RBP18.75■□□□□ 0.59
PRDM1-203ENST00000369096 DEF6Q9H4E7 631 aa18.75■□□□□ 0.59
PRDM1-203ENST00000369096 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
PRDM1-203ENST00000369096 EZRP15311 586 aaKnown RBP18.74■□□□□ 0.59
PRDM1-203ENST00000369096 LUC7LQ9NQ29 371 aaKnown RBP18.74■□□□□ 0.59
PRDM1-203ENST00000369096 ZNF396Q96N95 335 aaPredicted RBP18.74■□□□□ 0.59
PRDM1-203ENST00000369096 FAM177BA6PVY3 158 aa18.73■□□□□ 0.59
PRDM1-203ENST00000369096 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
PRDM1-203ENST00000369096 TIAM1Q13009 1591 aa18.73■□□□□ 0.59
PRDM1-203ENST00000369096 PPFIBP1Q86W92 1011 aa18.73■□□□□ 0.59
PRDM1-203ENST00000369096 MPNDQ8N594 471 aa18.73■□□□□ 0.59
PRDM1-203ENST00000369096 ZHX3Q9H4I2 956 aa18.73■□□□□ 0.59
PRDM1-203ENST00000369096 NLRP2Q9NX02 1062 aa18.73■□□□□ 0.59
PRDM1-203ENST00000369096 NESP48681 1621 aa18.73■□□□□ 0.59
PRDM1-203ENST00000369096 USP47Q96K76 1375 aa18.73■□□□□ 0.59
PRDM1-203ENST00000369096 MEX3CQ5U5Q3 659 aaKnown RBP18.72■□□□□ 0.59
PRDM1-203ENST00000369096 FAM177A1Q8N128 213 aaPredicted RBP18.72■□□□□ 0.59
PRDM1-203ENST00000369096 UACAQ9BZF9 1416 aa18.72■□□□□ 0.59
PRDM1-203ENST00000369096 JMYQ8N9B5 988 aa18.72■□□□□ 0.59
PRDM1-203ENST00000369096 CCDC112Q8NEF3 446 aa18.72■□□□□ 0.59
PRDM1-203ENST00000369096 POLA1P09884 1462 aaPredicted RBP18.71■□□□□ 0.59
PRDM1-203ENST00000369096 TANGO6Q9C0B7 1094 aa18.71■□□□□ 0.59
PRDM1-203ENST00000369096 STK11IPQ8N1F8 1099 aa18.7■□□□□ 0.58
PRDM1-203ENST00000369096 ERLIN1O75477 346 aa18.7■□□□□ 0.58
PRDM1-203ENST00000369096 SLC3A2P08195 630 aaKnown RBP18.7■□□□□ 0.58
PRDM1-203ENST00000369096 MCM2P49736 904 aa18.7■□□□□ 0.58
PRDM1-203ENST00000369096 BRPF3Q9ULD4 1205 aa18.7■□□□□ 0.58
PRDM1-203ENST00000369096 PRDM2Q13029 1718 aa18.7■□□□□ 0.58
PRDM1-203ENST00000369096 KIF7Q2M1P5 1343 aa18.7■□□□□ 0.58
PRDM1-203ENST00000369096 GNAI3P08754 354 aa18.7■□□□□ 0.58
PRDM1-203ENST00000369096 AAMPQ13685 434 aa18.69■□□□□ 0.58
PRDM1-203ENST00000369096 ATP2B2Q01814 1243 aa18.69■□□□□ 0.58
PRDM1-203ENST00000369096 STIM1Q13586 685 aa18.68■□□□□ 0.58
PRDM1-203ENST00000369096 EIF3JO75822 258 aaKnown RBP18.68■□□□□ 0.58
PRDM1-203ENST00000369096 CCDC192P0DO97 292 aa18.68■□□□□ 0.58
PRDM1-203ENST00000369096 FAM193AP78312 1265 aa18.68■□□□□ 0.58
PRDM1-203ENST00000369096 ME1P48163 572 aa18.67■□□□□ 0.58
PRDM1-203ENST00000369096 ABCA10Q8WWZ4 1543 aa18.67■□□□□ 0.58
PRDM1-203ENST00000369096 RABEP1Q15276 862 aa18.67■□□□□ 0.58
PRDM1-203ENST00000369096 LRRFIP2Q9Y608 721 aaKnown RBP18.67■□□□□ 0.58
PRDM1-203ENST00000369096 GAPVD1Q14C86 1478 aa18.66■□□□□ 0.58
PRDM1-203ENST00000369096 TNMDQ9H2S6 317 aa18.66■□□□□ 0.58
PRDM1-203ENST00000369096 GGNBP2Q9H3C7 697 aa18.66■□□□□ 0.58
PRDM1-203ENST00000369096 INCENPQ9NQS7 918 aa18.66■□□□□ 0.58
PRDM1-203ENST00000369096 EFCAB5A4FU69 1503 aa18.66■□□□□ 0.58
PRDM1-203ENST00000369096 CASKIN1Q8WXD9 1431 aa18.66■□□□□ 0.58
PRDM1-203ENST00000369096 HIP1O00291 1037 aa18.66■□□□□ 0.58
PRDM1-203ENST00000369096 DHX8Q14562 1220 aaKnown RBP18.65■□□□□ 0.58
PRDM1-203ENST00000369096 TRIM22Q8IYM9 498 aa18.65■□□□□ 0.58
PRDM1-203ENST00000369096 FYCO1Q9BQS8 1478 aa18.65■□□□□ 0.58
PRDM1-203ENST00000369096 TAF3Q5VWG9 929 aa18.65■□□□□ 0.58
PRDM1-203ENST00000369096 TXLNBQ8N3L3 684 aa18.65■□□□□ 0.58
PRDM1-203ENST00000369096 MAP3K1Q13233 1512 aa18.65■□□□□ 0.58
PRDM1-203ENST00000369096 STK3Q13188 491 aa18.65■□□□□ 0.58
PRDM1-203ENST00000369096 DACH1Q9UI36 760 aa18.65■□□□□ 0.58
PRDM1-203ENST00000369096 NUTM2GQ5VZR2 741 aa18.64■□□□□ 0.57
PRDM1-203ENST00000369096 SEPT11Q9NVA2 429 aaKnown RBP18.64■□□□□ 0.57
PRDM1-203ENST00000369096 USP8P40818 1118 aa18.64■□□□□ 0.57
PRDM1-203ENST00000369096 PKNOX2Q96KN3 472 aa18.63■□□□□ 0.57
PRDM1-203ENST00000369096 DYDC1Q8WWB3 177 aa18.63■□□□□ 0.57
PRDM1-203ENST00000369096 SSBP05455 408 aaKnown RBP eCLIP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms