RNA–Protein interactions for RNA: ENST00000368450.5

SHC1-204, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-204ENST00000368450 MYO5CQ9NQX4 1742 aa18.52■□□□□ 0.55
SHC1-204ENST00000368450 IPO8O15397 1037 aaKnown RBP18.51■□□□□ 0.55
SHC1-204ENST00000368450 NUCB2P80303 420 aa18.51■□□□□ 0.55
SHC1-204ENST00000368450 MTERF4Q7Z6M4 381 aaKnown RBP18.51■□□□□ 0.55
SHC1-204ENST00000368450 SMAP1Q8IYB5 467 aaPredicted RBP18.51■□□□□ 0.55
SHC1-204ENST00000368450 SASS6Q6UVJ0 657 aa18.51■□□□□ 0.55
SHC1-204ENST00000368450 TRAK1Q9UPV9 953 aa18.51■□□□□ 0.55
SHC1-204ENST00000368450 NSD3Q9BZ95 1437 aa18.5■□□□□ 0.55
SHC1-204ENST00000368450 ATP10BO94823 1461 aa18.5■□□□□ 0.55
SHC1-204ENST00000368450 HS1BP3Q53T59 392 aa18.5■□□□□ 0.55
SHC1-204ENST00000368450 LMBRD1Q9NUN5 540 aa18.5■□□□□ 0.55
SHC1-204ENST00000368450 PLXNC1O60486 1568 aa18.49■□□□□ 0.55
SHC1-204ENST00000368450 SYNJ2O15056 1496 aa18.49■□□□□ 0.55
SHC1-204ENST00000368450 FOXD4L6Q3SYB3 417 aaPredicted RBP18.49■□□□□ 0.55
SHC1-204ENST00000368450 FOXD4L3Q6VB84 417 aaPredicted RBP18.49■□□□□ 0.55
SHC1-204ENST00000368450 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
SHC1-204ENST00000368450 CCDC39Q9UFE4 941 aa18.49■□□□□ 0.55
SHC1-204ENST00000368450 CBX1P83916 185 aa18.48■□□□□ 0.55
SHC1-204ENST00000368450 FAM177BA6PVY3 158 aa18.48■□□□□ 0.55
SHC1-204ENST00000368450 GRIN2AQ12879 1464 aa18.47■□□□□ 0.55
SHC1-204ENST00000368450 CCDC27Q2M243 656 aa18.47■□□□□ 0.55
SHC1-204ENST00000368450 ZGPATQ8N5A5 531 aaKnown RBP18.46■□□□□ 0.55
SHC1-204ENST00000368450 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
SHC1-204ENST00000368450 ELL2O00472 640 aaPredicted RBP18.46■□□□□ 0.55
SHC1-204ENST00000368450 APBB1O00213 710 aa18.46■□□□□ 0.54
SHC1-204ENST00000368450 SLC24A1O60721 1099 aa18.46■□□□□ 0.54
SHC1-204ENST00000368450 CDC45O75419 566 aa18.46■□□□□ 0.54
SHC1-204ENST00000368450 GPT2Q8TD30 523 aa18.45■□□□□ 0.54
SHC1-204ENST00000368450 PDLIM2Q96JY6 352 aa18.45■□□□□ 0.54
SHC1-204ENST00000368450 IBTKQ9P2D0 1353 aaPredicted RBP18.45■□□□□ 0.54
SHC1-204ENST00000368450 SCAPERQ9BY12 1400 aa18.45■□□□□ 0.54
SHC1-204ENST00000368450 ZNF830Q96NB3 372 aaPredicted RBP18.45■□□□□ 0.54
SHC1-204ENST00000368450 TMEM63CQ9P1W3 806 aa18.44■□□□□ 0.54
SHC1-204ENST00000368450 TMPOP42166 694 aaKnown RBP18.43■□□□□ 0.54
SHC1-204ENST00000368450 KIAA2012Q0VF49 1180 aa18.43■□□□□ 0.54
SHC1-204ENST00000368450 RABEP1Q15276 862 aa18.43■□□□□ 0.54
SHC1-204ENST00000368450 CCDC94Q9BW85 323 aaPredicted RBP18.43■□□□□ 0.54
SHC1-204ENST00000368450 ADGRF5Q8IZF2 1346 aa18.43■□□□□ 0.54
SHC1-204ENST00000368450 PLCB2Q00722 1185 aa18.43■□□□□ 0.54
SHC1-204ENST00000368450 NSFL1CQ9UNZ2 370 aaKnown RBP18.43■□□□□ 0.54
SHC1-204ENST00000368450 CT47B1P0C2W7 299 aaPredicted RBP18.43■□□□□ 0.54
SHC1-204ENST00000368450 LRSAM1Q6UWE0 723 aa18.42■□□□□ 0.54
SHC1-204ENST00000368450 SYCP2Q9BX26 1530 aa18.42■□□□□ 0.54
SHC1-204ENST00000368450 NOL8Q76FK4 1167 aaKnown RBP18.41■□□□□ 0.54
SHC1-204ENST00000368450 GCC1Q96CN9 775 aa18.41■□□□□ 0.54
SHC1-204ENST00000368450 ARHGAP5Q13017 1502 aa18.4■□□□□ 0.54
SHC1-204ENST00000368450 MCM5P33992 734 aa18.4■□□□□ 0.54
SHC1-204ENST00000368450 CLEC17AQ6ZS10 378 aa18.4■□□□□ 0.54
SHC1-204ENST00000368450 ERVK-7P63135 1459 aa18.4■□□□□ 0.54
SHC1-204ENST00000368450 ST18O60284 1047 aa18.4■□□□□ 0.54
SHC1-204ENST00000368450 KDM5AP29375 1690 aaKnown RBP18.4■□□□□ 0.54
SHC1-204ENST00000368450 ARHGEF5Q12774 1597 aa18.4■□□□□ 0.54
SHC1-204ENST00000368450 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.4■□□□□ 0.543e-6■■□□□ 13.2
SHC1-204ENST00000368450 SAFB2Q14151 953 aaKnown RBP eCLIP18.39■□□□□ 0.54
SHC1-204ENST00000368450 C17orf53Q8N3J3 647 aaPredicted RBP18.39■□□□□ 0.53
SHC1-204ENST00000368450 SAMD9LQ8IVG5 1584 aa18.39■□□□□ 0.53
SHC1-204ENST00000368450 TMEM132EQ6IEE7 984 aa18.38■□□□□ 0.53
SHC1-204ENST00000368450 IGSF3O75054 1194 aa18.38■□□□□ 0.53
SHC1-204ENST00000368450 TRIM35Q9UPQ4 493 aa18.38■□□□□ 0.53
SHC1-204ENST00000368450 SPDYE4A6NLX3 237 aa18.38■□□□□ 0.53
SHC1-204ENST00000368450 PPP4R3BQ5MIZ7 849 aa18.37■□□□□ 0.53
SHC1-204ENST00000368450 RNF17Q9BXT8 1623 aaKnown RBP18.37■□□□□ 0.53
SHC1-204ENST00000368450 MYOM1P52179 1685 aa18.37■□□□□ 0.53
SHC1-204ENST00000368450 DMTNQ08495 405 aa18.37■□□□□ 0.53
SHC1-204ENST00000368450 C16orf71Q8IYS4 520 aaPredicted RBP18.36■□□□□ 0.53
SHC1-204ENST00000368450 IQGAP1P46940 1657 aa18.36■□□□□ 0.53
SHC1-204ENST00000368450 STAC3Q96MF2 364 aa18.36■□□□□ 0.53
SHC1-204ENST00000368450 MADDQ8WXG6 1647 aa18.36■□□□□ 0.53
SHC1-204ENST00000368450 GGNBP2Q9H3C7 697 aa18.36■□□□□ 0.53
SHC1-204ENST00000368450 TSPY26PQ9H489 355 aa18.36■□□□□ 0.53
SHC1-204ENST00000368450 CWC22Q9HCG8 908 aaKnown RBP18.36■□□□□ 0.53
SHC1-204ENST00000368450 KANK1Q14678 1352 aa18.36■□□□□ 0.53
SHC1-204ENST00000368450 GSPT1P15170 499 aaKnown RBP18.35■□□□□ 0.53
SHC1-204ENST00000368450 ZSCAN20P17040 1043 aaPredicted RBP18.35■□□□□ 0.53
SHC1-204ENST00000368450 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
SHC1-204ENST00000368450 MYRIPQ8NFW9 859 aa18.35■□□□□ 0.53
SHC1-204ENST00000368450 TTC12Q9H892 705 aaPredicted RBP18.35■□□□□ 0.53
SHC1-204ENST00000368450 IQSEC2Q5JU85 1478 aa18.35■□□□□ 0.53
SHC1-204ENST00000368450 GDPD2Q9HCC8 539 aa18.34■□□□□ 0.53
SHC1-204ENST00000368450 ZDHHC9Q9Y397 364 aa18.34■□□□□ 0.53
SHC1-204ENST00000368450 PPIP5K1Q6PFW1 1433 aa18.33■□□□□ 0.52
SHC1-204ENST00000368450 CYP2E1P05181 493 aaPredicted RBP18.33■□□□□ 0.52
SHC1-204ENST00000368450 CASC1Q6TDU7 716 aa18.33■□□□□ 0.52
SHC1-204ENST00000368450 THUMPD2Q9BTF0 503 aaKnown RBP18.33■□□□□ 0.52
SHC1-204ENST00000368450 USP26Q9BXU7 913 aa18.33■□□□□ 0.52
SHC1-204ENST00000368450 USP25Q9UHP3 1055 aa18.33■□□□□ 0.52
SHC1-204ENST00000368450 INTS3Q68E01 1043 aaKnown RBP18.32■□□□□ 0.52
SHC1-204ENST00000368450 IFT140Q96RY7 1462 aa18.32■□□□□ 0.52
SHC1-204ENST00000368450 UNC13BO14795 1591 aa18.32■□□□□ 0.52
SHC1-204ENST00000368450 NOLC1Q14978 699 aaKnown RBP eCLIP18.32■□□□□ 0.52
SHC1-204ENST00000368450 SIRT2Q8IXJ6 389 aa18.32■□□□□ 0.52
SHC1-204ENST00000368450 ATP10AO60312 1499 aa18.32■□□□□ 0.52
SHC1-204ENST00000368450 MBD3O95983 291 aa18.31■□□□□ 0.52
SHC1-204ENST00000368450 CHMP4BQ9H444 224 aaKnown RBP18.31■□□□□ 0.52
SHC1-204ENST00000368450 KIF3AQ9Y496 699 aa18.31■□□□□ 0.52
SHC1-204ENST00000368450 KIF3BO15066 747 aa18.31■□□□□ 0.52
SHC1-204ENST00000368450 NEK4P51957 841 aa18.31■□□□□ 0.52
SHC1-204ENST00000368450 AFAP1Q8N556 730 aa18.31■□□□□ 0.52
SHC1-204ENST00000368450 PTPRTO14522 1441 aa18.31■□□□□ 0.52
SHC1-204ENST00000368450 IQGAP3Q86VI3 1631 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms