RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.82■■■□□ 2.04
CD55-203ENST00000367063 BRD4O60885 1362 aaPredicted RBP27.81■■■□□ 2.04
CD55-203ENST00000367063 SSH2Q76I76 1423 aa27.81■■■□□ 2.04
CD55-203ENST00000367063 TRPM3Q9HCF6 1732 aaPredicted RBP27.8■■■□□ 2.04
CD55-203ENST00000367063 TTC21BQ7Z4L5 1316 aa27.8■■■□□ 2.04
CD55-203ENST00000367063 KNSTRNQ9Y448 316 aa27.8■■■□□ 2.04
CD55-203ENST00000367063 SBNO1A3KN83 1393 aa27.78■■■□□ 2.04
CD55-203ENST00000367063 PER1O15534 1290 aaPredicted RBP27.78■■■□□ 2.04
CD55-203ENST00000367063 LMOD2Q6P5Q4 547 aa27.77■■■□□ 2.04
CD55-203ENST00000367063 TTC21AQ8NDW8 1320 aa27.77■■■□□ 2.04
CD55-203ENST00000367063 FBXO41Q8TF61 875 aa27.76■■■□□ 2.03
CD55-203ENST00000367063 COL16A1Q07092 1604 aaPredicted RBP27.75■■■□□ 2.03
CD55-203ENST00000367063 TNS3Q68CZ2 1445 aa27.75■■■□□ 2.03
CD55-203ENST00000367063 ABTB2Q8N961 1025 aa27.75■■■□□ 2.03
CD55-203ENST00000367063 CGNL1Q0VF96 1302 aa27.75■■■□□ 2.03
CD55-203ENST00000367063 SPATA31A3Q5VYP0 1347 aa27.75■■■□□ 2.03
CD55-203ENST00000367063 LRRC59Q96AG4 307 aaKnown RBP27.75■■■□□ 2.03
CD55-203ENST00000367063 NME9Q86XW9 330 aa27.74■■■□□ 2.03
CD55-203ENST00000367063 ALS2Q96Q42 1657 aa27.73■■■□□ 2.03
CD55-203ENST00000367063 HSPA1LP34931 641 aa27.72■■■□□ 2.03
CD55-203ENST00000367063 PIK3C2AO00443 1686 aa27.71■■■□□ 2.03
CD55-203ENST00000367063 KIF20BQ96Q89 1820 aa27.71■■■□□ 2.03
CD55-203ENST00000367063 FYB1O15117 783 aa27.71■■■□□ 2.03
CD55-203ENST00000367063 NUTM2GQ5VZR2 741 aa27.71■■■□□ 2.03
CD55-203ENST00000367063 ARHGEF10O15013 1369 aa27.7■■■□□ 2.02
CD55-203ENST00000367063 AMER1Q5JTC6 1135 aaPredicted RBP27.69■■■□□ 2.02
CD55-203ENST00000367063 GGNBP2Q9H3C7 697 aa27.69■■■□□ 2.02
CD55-203ENST00000367063 NLRP6P59044 892 aa27.68■■■□□ 2.02
CD55-203ENST00000367063 CNGB1Q14028 1251 aaPredicted RBP27.68■■■□□ 2.02
CD55-203ENST00000367063 ZRANB1Q9UGI0 708 aa27.68■■■□□ 2.02
CD55-203ENST00000367063 PLEKHG5O94827 1062 aa27.66■■■□□ 2.02
CD55-203ENST00000367063 CC2D1BQ5T0F9 858 aaKnown RBP27.66■■■□□ 2.02
CD55-203ENST00000367063 NLRP13Q86W25 1043 aa27.65■■■□□ 2.02
CD55-203ENST00000367063 NSD2O96028 1365 aa27.65■■■□□ 2.02
CD55-203ENST00000367063 COG3Q96JB2 828 aa27.65■■■□□ 2.02
CD55-203ENST00000367063 USP31Q70CQ4 1352 aa27.64■■■□□ 2.02
CD55-203ENST00000367063 PNPLA6Q8IY17 1366 aa27.63■■■□□ 2.01
CD55-203ENST00000367063 NPC1L1Q9UHC9 1359 aa27.63■■■□□ 2.01
CD55-203ENST00000367063 OVOS2A0A0J9YW53 1432 aa27.62■■■□□ 2.01
CD55-203ENST00000367063 OVOS2Q6IE36 1432 aa27.62■■■□□ 2.01
CD55-203ENST00000367063 ANKRD26Q9UPS8 1709 aa27.61■■■□□ 2.01
CD55-203ENST00000367063 JCADQ9P266 1359 aa27.61■■■□□ 2.01
CD55-203ENST00000367063 MARF1Q9Y4F3 1742 aaKnown RBP27.6■■■□□ 2.01
CD55-203ENST00000367063 USP54Q70EL1 1684 aa27.6■■■□□ 2.01
CD55-203ENST00000367063 CABLES1Q8TDN4 633 aa27.59■■■□□ 2.01
CD55-203ENST00000367063 MORC1Q86VD1 984 aa27.59■■■□□ 2.01
CD55-203ENST00000367063 COL22A1Q8NFW1 1626 aaPredicted RBP27.58■■■□□ 2.01
CD55-203ENST00000367063 SHPRHQ149N8 1683 aa27.58■■■□□ 2.01
CD55-203ENST00000367063 MED1Q15648 1581 aaPredicted RBP27.58■■■□□ 2
CD55-203ENST00000367063 SOX12O15370 315 aa27.57■■■□□ 2
CD55-203ENST00000367063 USP19O94966 1318 aa27.57■■■□□ 2
CD55-203ENST00000367063 HAP1P54257 671 aaPredicted RBP27.56■■■□□ 2
CD55-203ENST00000367063 TNNT2P45379 298 aaPredicted RBP27.55■■■□□ 2
CD55-203ENST00000367063 DIEXFQ68CQ4 756 aaKnown RBP27.55■■■□□ 2
CD55-203ENST00000367063 CRYBG1Q9Y4K1 1723 aa27.54■■■□□ 2
CD55-203ENST00000367063 GCP02774 474 aa27.54■■■□□ 2
CD55-203ENST00000367063 PHRF1Q9P1Y6 1649 aaKnown RBP27.54■■■□□ 2
CD55-203ENST00000367063 SLIT3O75094 1523 aa27.54■■■□□ 2
CD55-203ENST00000367063 KCNH5Q8NCM2 988 aa27.53■■■□□ 2
CD55-203ENST00000367063 ABCA3Q99758 1704 aa27.52■■■□□ 2
CD55-203ENST00000367063 NUTM2BA6NNL0 878 aaPredicted RBP27.49■■□□□ 1.99
CD55-203ENST00000367063 NUTM2EB1AL46 878 aaPredicted RBP27.49■■□□□ 1.99
CD55-203ENST00000367063 ANP32CO43423 234 aa27.49■■□□□ 1.99
CD55-203ENST00000367063 FBLN1P23142 703 aa27.49■■□□□ 1.99
CD55-203ENST00000367063 NUTM2AQ8IVF1 878 aaPredicted RBP27.49■■□□□ 1.99
CD55-203ENST00000367063 PARD3Q8TEW0 1356 aa27.49■■□□□ 1.99
CD55-203ENST00000367063 SPATA31A6Q5VVP1 1343 aa27.48■■□□□ 1.99
CD55-203ENST00000367063 NFAT5O94916 1531 aa27.47■■□□□ 1.99
CD55-203ENST00000367063 ZC3H6P61129 1189 aaKnown RBP27.47■■□□□ 1.99
CD55-203ENST00000367063 RALBP1Q15311 655 aa27.47■■□□□ 1.99
CD55-203ENST00000367063 PRKRIP1Q9H875 184 aaPredicted RBP27.47■■□□□ 1.99
CD55-203ENST00000367063 AATKQ6ZMQ8 1374 aa27.45■■□□□ 1.98
CD55-203ENST00000367063 RRS1Q15050 365 aaKnown RBP27.44■■□□□ 1.98
CD55-203ENST00000367063 MAP2P11137 1827 aaKnown RBP27.44■■□□□ 1.98
CD55-203ENST00000367063 ZBTB7CA1YPR0 619 aa27.43■■□□□ 1.98
CD55-203ENST00000367063 KIAA0232Q92628 1395 aa27.42■■□□□ 1.98
CD55-203ENST00000367063 ADAMTS2O95450 1211 aa27.42■■□□□ 1.98
CD55-203ENST00000367063 LTN1O94822 1766 aa27.42■■□□□ 1.98
CD55-203ENST00000367063 MAP3K19Q56UN5 1328 aa27.41■■□□□ 1.98
CD55-203ENST00000367063 PPP2R1AP30153 589 aa27.4■■□□□ 1.98
CD55-203ENST00000367063 ILDR1Q86SU0 546 aaPredicted RBP27.4■■□□□ 1.98
CD55-203ENST00000367063 ARHGEF25Q86VW2 580 aa27.4■■□□□ 1.98
CD55-203ENST00000367063 POLKQ9UBT6 870 aa27.4■■□□□ 1.98
CD55-203ENST00000367063 CPDO75976 1380 aa27.4■■□□□ 1.98
CD55-203ENST00000367063 PPM1GO15355 546 aaPredicted RBP27.4■■□□□ 1.98
CD55-203ENST00000367063 PRDM11Q9NQV5 511 aa27.4■■□□□ 1.98
CD55-203ENST00000367063 EMILIN1Q9Y6C2 1016 aa27.4■■□□□ 1.98
CD55-203ENST00000367063 LRP6O75581 1613 aa27.38■■□□□ 1.97
CD55-203ENST00000367063 AMPHP49418 695 aa27.37■■□□□ 1.97
CD55-203ENST00000367063 CHRNA2Q15822 529 aa27.37■■□□□ 1.97
CD55-203ENST00000367063 MYBBP1AQ9BQG0 1328 aaKnown RBP27.37■■□□□ 1.97
CD55-203ENST00000367063 MTHFSP49914 203 aa27.36■■□□□ 1.97
CD55-203ENST00000367063 FAM83GA6ND36 823 aa27.35■■□□□ 1.97
CD55-203ENST00000367063 MEX3CQ5U5Q3 659 aaKnown RBP27.34■■□□□ 1.97
CD55-203ENST00000367063 PEAK1Q9H792 1746 aa27.33■■□□□ 1.97
CD55-203ENST00000367063 SMG6Q86US8 1419 aaKnown RBP27.33■■□□□ 1.97
CD55-203ENST00000367063 HOXC9P31274 260 aa27.32■■□□□ 1.96
CD55-203ENST00000367063 RTL1A6NKG5 1358 aa27.32■■□□□ 1.96
CD55-203ENST00000367063 FLT4P35916 1363 aa27.32■■□□□ 1.96
CD55-203ENST00000367063 KIF24Q5T7B8 1368 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms