RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 POLR3AO14802 1390 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-216ENST00000366744 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
MRPL55-216ENST00000366744 POTEAQ6S8J7 498 aa13.17□□□□□ -0.3
MRPL55-216ENST00000366744 CABP2Q9NPB3 220 aa13.17□□□□□ -0.3
MRPL55-216ENST00000366744 TIMELESSQ9UNS1 1208 aa13.17□□□□□ -0.3
MRPL55-216ENST00000366744 CDK12Q9NYV4 1490 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-216ENST00000366744 NRKQ7Z2Y5 1582 aa13.16□□□□□ -0.3
MRPL55-216ENST00000366744 USP21Q9UK80 565 aa13.16□□□□□ -0.3
MRPL55-216ENST00000366744 ACEP12821 1306 aa13.15□□□□□ -0.3
MRPL55-216ENST00000366744 RXRBP28702 533 aa13.15□□□□□ -0.3
MRPL55-216ENST00000366744 NRAPQ86VF7 1730 aa13.15□□□□□ -0.3
MRPL55-216ENST00000366744 BRD4O60885 1362 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-216ENST00000366744 TRPC5Q9UL62 973 aaPredicted RBP13.14□□□□□ -0.31
MRPL55-216ENST00000366744 PIK3C2AO00443 1686 aa13.14□□□□□ -0.31
MRPL55-216ENST00000366744 PLEKHG3A1L390 1219 aa13.13□□□□□ -0.31
MRPL55-216ENST00000366744 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
MRPL55-216ENST00000366744 USP6P35125 1406 aa13.13□□□□□ -0.31
MRPL55-216ENST00000366744 USP47Q96K76 1375 aa13.12□□□□□ -0.31
MRPL55-216ENST00000366744 RBM6P78332 1123 aaKnown RBP13.12□□□□□ -0.31
MRPL55-216ENST00000366744 CABLES1Q8TDN4 633 aa13.12□□□□□ -0.31
MRPL55-216ENST00000366744 SLIT2O94813 1529 aa13.12□□□□□ -0.31
MRPL55-216ENST00000366744 QTRT2Q9H974 415 aaKnown RBP13.11□□□□□ -0.31
MRPL55-216ENST00000366744 ATRNO75882 1429 aa13.11□□□□□ -0.31
MRPL55-216ENST00000366744 FNBP4Q8N3X1 1017 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-216ENST00000366744 ABTB2Q8N961 1025 aa13.1□□□□□ -0.31
MRPL55-216ENST00000366744 CABP1Q9NZU7 370 aa13.1□□□□□ -0.31
MRPL55-216ENST00000366744 RGS12O14924 1447 aa13.1□□□□□ -0.31
MRPL55-216ENST00000366744 NINLQ9Y2I6 1382 aa13.09□□□□□ -0.31
MRPL55-216ENST00000366744 USP54Q70EL1 1684 aa13.09□□□□□ -0.31
MRPL55-216ENST00000366744 PRDM11Q9NQV5 511 aa13.09□□□□□ -0.31
MRPL55-216ENST00000366744 BCL9LQ86UU0 1499 aa13.09□□□□□ -0.31
MRPL55-216ENST00000366744 KTN1Q86UP2 1357 aaKnown RBP13.08□□□□□ -0.31
MRPL55-216ENST00000366744 NLRP13Q86W25 1043 aa13.08□□□□□ -0.32
MRPL55-216ENST00000366744 UNC5CLQ8IV45 518 aa13.08□□□□□ -0.32
MRPL55-216ENST00000366744 CCDC9Q9Y3X0 531 aaKnown RBP13.08□□□□□ -0.32
MRPL55-216ENST00000366744 KIF20BQ96Q89 1820 aa13.08□□□□□ -0.32
MRPL55-216ENST00000366744 GLI3P10071 1580 aa13.07□□□□□ -0.32
MRPL55-216ENST00000366744 LTN1O94822 1766 aa13.07□□□□□ -0.32
MRPL55-216ENST00000366744 BRWD3Q6RI45 1802 aa13.07□□□□□ -0.32
MRPL55-216ENST00000366744 NUTM2GQ5VZR2 741 aa13.07□□□□□ -0.32
MRPL55-216ENST00000366744 HDGFL2Q7Z4V5 671 aaPredicted RBP13.07□□□□□ -0.32
MRPL55-216ENST00000366744 TMC1Q8TDI8 760 aa13.07□□□□□ -0.32
MRPL55-216ENST00000366744 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
MRPL55-216ENST00000366744 SLIT3O75094 1523 aa13.07□□□□□ -0.32
MRPL55-216ENST00000366744 ST20-MTHFSA0A0A6YYL1 179 aa13.06□□□□□ -0.32
MRPL55-216ENST00000366744 TMF1P82094 1093 aa13.06□□□□□ -0.32
MRPL55-216ENST00000366744 TTC21AQ8NDW8 1320 aa13.06□□□□□ -0.32
MRPL55-216ENST00000366744 KIAA0232Q92628 1395 aa13.06□□□□□ -0.32
MRPL55-216ENST00000366744 MYOM1P52179 1685 aa13.05□□□□□ -0.32
MRPL55-216ENST00000366744 CDCA8Q53HL2 280 aa13.05□□□□□ -0.32
MRPL55-216ENST00000366744 TERF2IPQ9NYB0 399 aa13.05□□□□□ -0.32
MRPL55-216ENST00000366744 USP19O94966 1318 aa13.05□□□□□ -0.32
MRPL55-216ENST00000366744 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
MRPL55-216ENST00000366744 CPSF1Q10570 1443 aaKnown RBP13.05□□□□□ -0.32
MRPL55-216ENST00000366744 NLRP6P59044 892 aa13.04□□□□□ -0.32
MRPL55-216ENST00000366744 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-216ENST00000366744 BTG4Q9NY30 223 aa13.04□□□□□ -0.32
MRPL55-216ENST00000366744 WNK3Q9BYP7 1800 aa13.04□□□□□ -0.32
MRPL55-216ENST00000366744 EDC4Q6P2E9 1401 aaKnown RBP13.04□□□□□ -0.32
MRPL55-216ENST00000366744 RGPD5Q99666 1765 aa13.03□□□□□ -0.32
MRPL55-216ENST00000366744 A0A0G2JS52 829 aa13.03□□□□□ -0.32
MRPL55-216ENST00000366744 MYT1Q01538 1121 aa13.03□□□□□ -0.32
MRPL55-216ENST00000366744 PUS7Q96PZ0 661 aaKnown RBP13.03□□□□□ -0.32
MRPL55-216ENST00000366744 FAM83GA6ND36 823 aa13.02□□□□□ -0.33
MRPL55-216ENST00000366744 ZC3H6P61129 1189 aaKnown RBP13.02□□□□□ -0.33
MRPL55-216ENST00000366744 VPS72Q15906 364 aa13.02□□□□□ -0.33
MRPL55-216ENST00000366744 CPDO75976 1380 aa13.02□□□□□ -0.33
MRPL55-216ENST00000366744 SSH2Q76I76 1423 aa13.02□□□□□ -0.33
MRPL55-216ENST00000366744 ABCC6O95255 1503 aa13.02□□□□□ -0.33
MRPL55-216ENST00000366744 ZBTB7CA1YPR0 619 aa13.01□□□□□ -0.33
MRPL55-216ENST00000366744 TESK2Q96S53 571 aa13.01□□□□□ -0.33
MRPL55-216ENST00000366744 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
MRPL55-216ENST00000366744 A0A1W2PP64 1363 aa13.01□□□□□ -0.33
MRPL55-216ENST00000366744 CD163L1Q9NR16 1453 aa13.01□□□□□ -0.33
MRPL55-216ENST00000366744 KCNH5Q8NCM2 988 aa13□□□□□ -0.33
MRPL55-216ENST00000366744 EP400Q96L91 3159 aa13□□□□□ -0.33
MRPL55-216ENST00000366744 FAM208AQ9UK61 1670 aaKnown RBP12.99□□□□□ -0.33
MRPL55-216ENST00000366744 THSD7AQ9UPZ6 1657 aa12.99□□□□□ -0.33
MRPL55-216ENST00000366744 NFAT5O94916 1531 aa12.99□□□□□ -0.33
MRPL55-216ENST00000366744 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
MRPL55-216ENST00000366744 GCP02774 474 aa12.99□□□□□ -0.33
MRPL55-216ENST00000366744 CHRNA2Q15822 529 aa12.99□□□□□ -0.33
MRPL55-216ENST00000366744 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.99□□□□□ -0.33
MRPL55-216ENST00000366744 STRN4Q9NRL3 753 aa12.99□□□□□ -0.33
MRPL55-216ENST00000366744 EVA1CP58658 441 aa12.98□□□□□ -0.33
MRPL55-216ENST00000366744 EIF4G2P78344 907 aaKnown RBP eCLIP12.98□□□□□ -0.33
MRPL55-216ENST00000366744 COL18A1P39060 1754 aa12.98□□□□□ -0.33
MRPL55-216ENST00000366744 CAMTA1Q9Y6Y1 1673 aa12.98□□□□□ -0.33
MRPL55-216ENST00000366744 COL5A2P05997 1499 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-216ENST00000366744 RGPD1P0DJD0 1748 aa12.97□□□□□ -0.33
MRPL55-216ENST00000366744 SOX12O15370 315 aa12.97□□□□□ -0.33
MRPL55-216ENST00000366744 SLC12A5Q9H2X9 1139 aa12.97□□□□□ -0.33
MRPL55-216ENST00000366744 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.33
MRPL55-216ENST00000366744 ANKRD26Q9UPS8 1709 aa12.96□□□□□ -0.33
MRPL55-216ENST00000366744 AATKQ6ZMQ8 1374 aa12.95□□□□□ -0.34
MRPL55-216ENST00000366744 USP31Q70CQ4 1352 aa12.95□□□□□ -0.34
MRPL55-216ENST00000366744 SPATA31A5Q5VU36 1347 aa12.95□□□□□ -0.34
MRPL55-216ENST00000366744 SPATA31A7Q8IWB4 1347 aa12.95□□□□□ -0.34
MRPL55-216ENST00000366744 OVOS2A0A0J9YW53 1432 aa12.95□□□□□ -0.34
MRPL55-216ENST00000366744 OVOS2Q6IE36 1432 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms