RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 RGS12O14924 1447 aa4.97□□□□□ -1.61
RNU4-35P-201ENST00000362588 ACEP12821 1306 aa4.97□□□□□ -1.61
RNU4-35P-201ENST00000362588 MYOM1P52179 1685 aa4.96□□□□□ -1.61
RNU4-35P-201ENST00000362588 GLI3P10071 1580 aa4.96□□□□□ -1.62
RNU4-35P-201ENST00000362588 POLR3AO14802 1390 aaPredicted RBP4.96□□□□□ -1.62
RNU4-35P-201ENST00000362588 HAP1P54257 671 aaPredicted RBP4.96□□□□□ -1.62
RNU4-35P-201ENST00000362588 SLIT2O94813 1529 aa4.96□□□□□ -1.62
RNU4-35P-201ENST00000362588 COL14A1Q05707 1796 aaKnown RBP4.96□□□□□ -1.62
RNU4-35P-201ENST00000362588 BCL9LQ86UU0 1499 aa4.95□□□□□ -1.62
RNU4-35P-201ENST00000362588 ARHGEF10O15013 1369 aa4.95□□□□□ -1.62
RNU4-35P-201ENST00000362588 ZNF772Q68DY9 489 aaPredicted RBP4.95□□□□□ -1.62
RNU4-35P-201ENST00000362588 CCER1Q8TC90 406 aaPredicted RBP4.95□□□□□ -1.62
RNU4-35P-201ENST00000362588 CABP1Q9NZU7 370 aa4.95□□□□□ -1.62
RNU4-35P-201ENST00000362588 USP21Q9UK80 565 aa4.95□□□□□ -1.62
RNU4-35P-201ENST00000362588 LTN1O94822 1766 aa4.95□□□□□ -1.62
RNU4-35P-201ENST00000362588 ATRNO75882 1429 aa4.95□□□□□ -1.62
RNU4-35P-201ENST00000362588 USP6P35125 1406 aa4.95□□□□□ -1.62
RNU4-35P-201ENST00000362588 EVC2Q86UK5 1308 aa4.95□□□□□ -1.62
RNU4-35P-201ENST00000362588 CD163L1Q9NR16 1453 aa4.94□□□□□ -1.62
RNU4-35P-201ENST00000362588 USP47Q96K76 1375 aa4.94□□□□□ -1.62
RNU4-35P-201ENST00000362588 LMO7Q8WWI1 1683 aa4.94□□□□□ -1.62
RNU4-35P-201ENST00000362588 PLEKHG3A1L390 1219 aa4.94□□□□□ -1.62
RNU4-35P-201ENST00000362588 QTRT2Q9H974 415 aaKnown RBP4.94□□□□□ -1.62
RNU4-35P-201ENST00000362588 CCDC61Q9Y6R9 512 aa4.94□□□□□ -1.62
RNU4-35P-201ENST00000362588 WNK3Q9BYP7 1800 aa4.94□□□□□ -1.62
RNU4-35P-201ENST00000362588 COL18A1P39060 1754 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 KIAA0232Q92628 1395 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 SBNO2Q9Y2G9 1366 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 SLIT3O75094 1523 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 USP54Q70EL1 1684 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 KIF20BQ96Q89 1820 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 ST20-MTHFSA0A0A6YYL1 179 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 ZBTB7CA1YPR0 619 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 FAM83GA6ND36 823 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 SOX12O15370 315 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 RXRBP28702 533 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 ZC3H6P61129 1189 aaKnown RBP4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 CHRNA2Q15822 529 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 FNBP4Q8N3X1 1017 aaPredicted RBP4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 TESK2Q96S53 571 aa4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 CDK12Q9NYV4 1490 aaPredicted RBP4.93□□□□□ -1.62
RNU4-35P-201ENST00000362588 ATAD2Q6PL18 1390 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 CPSF1Q10570 1443 aaKnown RBP4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 SSH2Q76I76 1423 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 RGPD2P0DJD1 1756 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 RBM6P78332 1123 aaKnown RBP4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 UNC5CLQ8IV45 518 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 ABTB2Q8N961 1025 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 TMC1Q8TDI8 760 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 PRDM11Q9NQV5 511 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 BTG4Q9NY30 223 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 ZRANB1Q9UGI0 708 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 TRPC5Q9UL62 973 aaPredicted RBP4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 CCDC9Q9Y3X0 531 aaKnown RBP4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 THSD7AQ9UPZ6 1657 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 CAMTA1Q9Y6Y1 1673 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 USP19O94966 1318 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 CLSPNQ9HAW4 1339 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 NFAT5O94916 1531 aa4.92□□□□□ -1.62
RNU4-35P-201ENST00000362588 A0A1W2PP64 1363 aa4.91□□□□□ -1.62
RNU4-35P-201ENST00000362588 KTN1Q86UP2 1357 aaKnown RBP4.91□□□□□ -1.62
RNU4-35P-201ENST00000362588 NLRP6P59044 892 aa4.91□□□□□ -1.62
RNU4-35P-201ENST00000362588 NME9Q86XW9 330 aa4.91□□□□□ -1.62
RNU4-35P-201ENST00000362588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.91□□□□□ -1.62
RNU4-35P-201ENST00000362588 SLC12A5Q9H2X9 1139 aa4.91□□□□□ -1.62
RNU4-35P-201ENST00000362588 TTC21BQ7Z4L5 1316 aa4.91□□□□□ -1.62
RNU4-35P-201ENST00000362588 KAT6BQ8WYB5 2073 aa4.9□□□□□ -1.62
RNU4-35P-201ENST00000362588 GJD4Q96KN9 370 aaPredicted RBP4.9□□□□□ -1.63
RNU4-35P-201ENST00000362588 STRN4Q9NRL3 753 aa4.9□□□□□ -1.63
RNU4-35P-201ENST00000362588 COL5A2P05997 1499 aaPredicted RBP4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 A0A0G2JS52 829 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 GCP02774 474 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 MYT1Q01538 1121 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 VPS72Q15906 364 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 FAM98CQ17RN3 349 aaKnown RBP4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 FAM182BQ5T319 152 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 LARP1Q6PKG0 1096 aaKnown RBP4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 NLRP13Q86W25 1043 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 UPF1Q92900 1129 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 POLR3GLQ9BT43 218 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 USP35Q9P2H5 1018 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 LRRC37A3O60309 1634 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 PEAK1Q9H792 1746 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 TNS1Q9HBL0 1735 aaKnown RBP4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 PARP4Q9UKK3 1724 aaKnown RBP4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 ANKRD26Q9UPS8 1709 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 OVOS2A0A0J9YW53 1432 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 OVOS2Q6IE36 1432 aa4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 EDC4Q6P2E9 1401 aaKnown RBP4.89□□□□□ -1.63
RNU4-35P-201ENST00000362588 MAP2P11137 1827 aaKnown RBP4.88□□□□□ -1.63
RNU4-35P-201ENST00000362588 SBF2Q86WG5 1849 aa4.88□□□□□ -1.63
RNU4-35P-201ENST00000362588 HSPA5P11021 654 aaKnown RBP4.88□□□□□ -1.63
RNU4-35P-201ENST00000362588 FBLN1P23142 703 aa4.88□□□□□ -1.63
RNU4-35P-201ENST00000362588 TMF1P82094 1093 aa4.88□□□□□ -1.63
RNU4-35P-201ENST00000362588 HDGFL2Q7Z4V5 671 aaPredicted RBP4.88□□□□□ -1.63
RNU4-35P-201ENST00000362588 SEPT12Q8IYM1 358 aa4.88□□□□□ -1.63
RNU4-35P-201ENST00000362588 EP400Q96L91 3159 aa4.88□□□□□ -1.63
RNU4-35P-201ENST00000362588 SPATA31A5Q5VU36 1347 aa4.88□□□□□ -1.63
RNU4-35P-201ENST00000362588 SPATA31A7Q8IWB4 1347 aa4.88□□□□□ -1.63
RNU4-35P-201ENST00000362588 TTC21AQ8NDW8 1320 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms